WERAM Information

Tag Content
WERAM ID WERAM-Tra-0329
Ensembl Protein ID Traes_7DS_7020AAED2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Traes_7DS_7020AAED2 Traes_7DS_7020AAED2.1 Traes_7DS_7020AAED2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 7.30e-61 207.7 322 556
Organism Triticum aestivum
Domain Profile
  HDM JHDM2
                JHDM2.txt   6 dgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkk.waeedlkell 77 
                               g+lNLa++lpk + +pdlgPk+y AyG+a+e + +++ t lh+dv+davn+lv+             ++  k++  +ee  ++l+
  TRAES3BF108100010CFD_t1 322 CGPLNLAVRLPKDVKKPDLGPKTYIAYGFAQELGIGDSLTYLHCDVADAVNVLVHthgtklklqrltaIEKRKDSlLNEERTRNLQ 407
                              59****************************************************************99777776654555556777 PP
                JHDM2.txt  78 ksieee.............eldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga...evppdhdpihdqswyldrk 147
                              +s ++              e ++     v+  + + galW+if+++d+  ++e+l  +  e++     v+++ dpihd  +yl+++
  TRAES3BF108100010CFD_t1 408 ASPDHSdvgikvdvslikpEPKDDGLPFVEGDQPEGGALWDIFRREDVGILEEYLTAHAGEFRNnseLVKQVTDPIHDHCFYLTKE 493
                              7777775545443333333222222233444445679************************999554467899************* PP
                JHDM2.txt 148 lrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkey 210
                              ++++L+e+yGve+wt+ Qklg+av+ip+g+pHqv+nlksc kva dFvsPEn +ec++ t++ 
  TRAES3BF108100010CFD_t1 494 HKRKLKEQYGVEPWTFEQKLGEAVFIPTGCPHQVRNLKSCTKVALDFVSPENFEECIKYTNKI 556
                              *********************************************************999876 PP
Protein Sequence
(Fasta)		NNRWCLSLFL CSPTHRNYYV QESGKYKGTI RRHVDLEMIR SRLESGGAAG GPDSACYASA 60
SEFYRDLLLL CANALVFFPR GSPEH 85
Nucleotide Sequence
(Fasta)		ATCCAATCTA ACCTTCTCCT CCAAATTGGC TGCTATTTTC TCCACAAGGA AAATGGGGAA 60
CTAATCGTGG TCTCACATGC GCGCTGTGTC GGGTTTCCTA TTTGAAACTA ATTTTCTTCC 120
TAACTTTTTC TTTCCTATCG TAAAATAATC GTTGGTGCCT CTCTCTCTTT CTCTGCTCAC 180
CGACCCACCG AAATTATTAT GTGCAGGAGA GCGGCAAGTA CAAGGGCACC ATCAGGCGCC 240
ACGTGGACCT GGAGATGATC AGATCCAGGC TGGAATCCGG TGGGGCCGCT GGCGGGCCGG 300
ACAGTGCGTG CTACGCGTCA GCCTCCGAGT TCTACCGGGA CCTGCTGCTG CTATGCGCCA 360
ACGCTCTCGT CTTCTTCCCG CGTGGCTCGC CAGAGCAC 399
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aet-0108 EMT21081 Aegilops tauschii 94 1e-33 138
WERAM-Tru-0078 TRIUR3_28812-P1 Triticum urartu 91 3e-33 136
WERAM-Hov-0028 MLOC_20426.3 Hordeum vulgare 98 6e-32 132
WERAM-Sei-0046 Si013408m Setaria italica 68 6e-23 102
WERAM-Brd-0083 BRADI3G40060.1 Brachypodium distachyon 69 7e-21 95.5
WERAM-Sob-0110 Sb07g027680.1 Sorghum bicolor 62 9e-21 95.5
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 71 1e-20 95.1
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 67 1e-20 94.7
WERAM-Zem-0018 GRMZM2G022499_P01 Zea mays 59 2e-19 90.9
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 56 3e-17 83.6
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 71 4e-17 83.2
WERAM-Ors-0085 OS08T0510700-01 Oryza sativa 72 4e-17 83.2
WERAM-Orr-0099 ORUFI08G22500.1 Oryza rufipogon 72 4e-17 83.2
WERAM-Ori-0091 BGIOSGA026697-PA Oryza indica 72 4e-17 83.2
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 71 2e-16 81.3
WERAM-Orni-0095 ONIVA08G22660.1 Oryza nivara 69 2e-16 80.9
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 68 5e-16 79.3
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 45 3e-12 67.0
WERAM-Amt-0030 ERN11592 Amborella trichopoda 50 4e-12 66.6
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 51 6e-12 65.9
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 47 1e-11 64.7
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 45 8e-11 62.4
WERAM-Prp-0113 EMJ03206 Prunus persica 47 8e-11 62.4
WERAM-Brr-0039 Bra007506.1-P Brassica rapa 47 1e-09 58.5
WERAM-Met-0045 AES66032 Medicago truncatula 44 1e-09 58.2
WERAM-Bro-0157 Bo8g094870.1 Brassica oleracea 45 2e-09 57.8
WERAM-Art-0091 AT3G57980.1 Arabidopsis thaliana 44 6e-09 55.8
WERAM-Thc-0062 EOY09477 Theobroma cacao 45 6e-09 55.8
WERAM-Sol-0008 Solyc01g073950.2.1 Solanum lycopersicum 41 1e-08 54.7
WERAM-Arl-0012 Al_scaffold_0005_2712 Arabidopsis lyrata 43 2e-08 54.7
WERAM-Glm-0167 GLYMA13G31800.1 Glycine max 42 3e-08 53.9
WERAM-Sot-0030 PGSC0003DMT400028077 Solanum tuberosum 42 8e-08 52.4
WERAM-Pot-0002 POPTR_0001s05120.1 Populus trichocarpa 45 4e-07 50.1
Created Date 25-Jun-2016