WERAM Information

Tag Content
WERAM ID WERAM-Tra-0161
Ensembl Protein ID Traes_4DS_F63696DBA.2
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Traes_4DS_F63696DBA Traes_4DS_F63696DBA.2 Traes_4DS_F63696DBA.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.20e-11 47 26 128
Organism Triticum aestivum
Domain Profile
  HDAC Class-I
            class-1.txt 207 vgaekgkyyavnvPlk.dgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlG 292
                            vg+ +gk ++vn+P +  g+ D+ y   f++v+ ++   f P++ ++  G D+  gD+lg+ +++  g++++ +++    + +llv+ 
  Traes_5AS_11A363533.2  26 VGVLDGKGFSVNIPWScGGVGDNDYIFAFQHVVLPIATEFAPDITIISAGFDAARGDPLGCCDVTPAGYSQMTSMLTACsEGKLLVIL 113
                            7888999*******98368*******************************************************999986889***** PP
            class-1.txt 293 GGGYtlrnvaRcwty 307
                             GGY+lr ++   t 
  Traes_5AS_11A363533.2 114 EGGYNLRSISSSATE 128
                            *******99976665 PP
Protein Sequence
(Fasta)		VTSCGGDHSG TFSHLPTPFR RPIQTAAVPP SSFLGRPPIE IQGKPPPWRR RPAAIQCSPP 60
ARDKLKHFRL KELKDVLYKI GLSKHGKKQE LVDKIVAILS DQQDQASKID GLPNRLMVGK 120
ETVVKIVEDT FRKMREPANA VSASGNQNEL GYSVMPMKNP DDSAQLDIKV RCPCGNSMAT 180
GSMIQCDHPR CSVWQHIDCV IIPEKTADTA PQELPSSFYC EMCRVSRADP FWVTINHPLL 240
PVSVAPSNIM ADGSYTVQYI EKTFPLSRAN REMLQKAEYD IQVWCILLDD KVPFRMHWPL 300
HSDMQINGIP VRVVSRQATQ PLGANGRDDG LMLTQFLKEG PNKIVLSRSD SRAFCLGVRI 360
AKRRSLEEVL NLVPKEQDGE KFDDALSRVR RCVGGGTEAD NADSDSDIEV VADSVSVNLR 420
CPMTGSRIKV AGRFKPCVHM GCFDLEAFVE LNQRSRKWQC PICLKNYSLE NLIIDPYFNR 480
ITSLIKSCGD DISEIDVKPD GSWRAKGGAE LKDLMQWHLP DGTLCMSTGT GPKPNMGVVK 540
QEIKEEPLPE NKGSRLKLGI RRNNNGKWEI SKKGDVNLKP TSYNDQSRDF ENGKCVTHTS 600
NTNHEDAKGG SYNSEPGQSD HPTSSVYDLN SSPGDEHVPI VLSDSDDENT TVLSPSAVNC 660
GAANDTGYEF PPPNPLDTSG GPDETSFFLN ENFDDLGLSF WEYPSTTQDD PGIQGTDNLG 720
EVQNYPATNL SLHEPVSTVN LGVLAPAANQ PEYGNDGSLN NAKNTSRKRK NPANEITSLD 780
ASVLMSGNDD DDFAGDRSGG TSSLSGQPRS VRPKSVLAVE SDSD 824
Nucleotide Sequence
(Fasta)		CGTGACCTCG TGCGGCGGCG ATCATTCCGG TACCTTCTCC CACCTCCCGA CCCCCTTCCG 60
TCGCCCCATC CAAACCGCTG CCGTTCCTCC TTCCTCCTTT CTCGGCCGCC CGCCCATCGA 120
AATCCAGGGA AAACCGCCGC CATGGCGTCG GCGCCCGGCG GCGATCCAGT GCTCGCCGCC 180
TGCAAGGGAC AAGCTGAAGC ACTTCCGGTT AAAAGAGCTA AAGGATGTCC TGTATAAGAT 240
TGGACTTTCA AAGCATGGAA AGAAGCAGGA ACTAGTGGAT AAAATCGTTG CAATATTATC 300
CGATCAACAG GATCAAGCCT CCAAAATTGA TGGCTTGCCA AACAGACTGA TGGTTGGAAA 360
AGAAACGGTA GTGAAAATAG TCGAGGACAC TTTTAGAAAA ATGCGCGAGC CTGCAAATGC 420
TGTTTCAGCC TCTGGAAACC AGAACGAGCT GGGGTACAGT GTAATGCCTA TGAAAAACCC 480
AGATGATTCT GCTCAGCTGG ATATCAAGGT CCGTTGCCCC TGTGGTAATT CCATGGCCAC 540
TGGGTCCATG ATTCAGTGTG ATCATCCACG ATGCAGTGTA TGGCAACATA TTGATTGTGT 600
CATCATACCT GAGAAGACTG CAGATACTGC TCCTCAAGAA CTACCTTCCA GTTTCTATTG 660
TGAGATGTGC CGAGTCAGCA GGGCAGACCC TTTCTGGGTC ACTATTAACC ACCCATTACT 720
TCCAGTGTCA GTAGCTCCTT CCAACATAAT GGCAGATGGG TCATATACTG TACAGTATAT 780
CGAGAAAACC TTTCCGTTAT CAAGAGCTAA TAGGGAAATG CTACAGAAAG CTGAATATGA 840
CATTCAGGTT TGGTGTATCC TTCTCGATGA CAAAGTTCCT TTCAGGATGC ACTGGCCTTT 900
ACATTCTGAC ATGCAAATTA ATGGTATTCC TGTTCGGGTT GTCAGCAGGC AAGCTACACA 960
GCCGTTAGGG GCCAATGGTA GAGATGATGG TCTTATGTTA ACACAGTTTT TGAAAGAAGG 1020
TCCCAATAAG ATTGTTCTAT CTAGAAGTGA CTCTCGTGCC TTCTGTTTGG GTGTCAGAAT 1080
TGCCAAGAGG AGATCTCTGG AAGAGGTCCT AAATTTGGTA CCAAAGGAAC AGGATGGTGA 1140
GAAGTTTGAT GATGCCCTTT CTCGTGTGCG TCGCTGTGTC GGTGGGGGGA CTGAGGCAGA 1200
TAATGCAGAC AGTGATAGTG ATATTGAGGT CGTTGCTGAT TCAGTCTCTG TAAATCTCCG 1260
ATGCCCTATG ACTGGTTCAA GGATTAAGGT AGCTGGTAGG TTCAAACCCT GTGTCCACAT 1320
GGGTTGTTTT GATTTAGAAG CTTTTGTGGA ACTGAATCAA CGTTCACGGA AGTGGCAATG 1380
CCCAATTTGC CTGAAGAACT ATTCTCTGGA GAATCTAATT ATTGATCCTT ATTTCAATCG 1440
CATCACTTCG CTAATCAAAA GCTGTGGAGA TGATATATCA GAAATCGATG TCAAGCCGGA 1500
TGGTTCCTGG AGAGCTAAGG GTGGAGCTGA ACTGAAGGAT CTTATGCAGT GGCATTTACC 1560
AGATGGCACT CTCTGTATGT CCACAGGTAC AGGACCGAAA CCCAACATGG GTGTTGTAAA 1620
GCAAGAGATT AAAGAAGAAC CGTTGCCCGA AAATAAGGGT TCTCGTCTCA AACTGGGAAT 1680
TAGGAGAAAC AACAATGGCA AATGGGAAAT TAGCAAGAAA GGGGATGTTA ATTTGAAACC 1740
AACTTCTTAT AATGATCAGA GTAGAGACTT TGAAAATGGG AAATGTGTCA CCCATACAAG 1800
CAACACTAAT CATGAGGATG CTAAAGGTGG AAGTTATAAT TCAGAACCGG GACAATCTGA 1860
TCACCCTACG AGCAGTGTAT ATGATCTGAA TTCTTCTCCT GGGGATGAAC ATGTTCCAAT 1920
AGTTCTGAGC GATTCAGATG ATGAAAATAC TACGGTGTTG TCTCCTAGTG CAGTGAATTG 1980
TGGCGCAGCA AATGACACCG GATATGAGTT TCCACCGCCC AATCCACTTG ACACTTCAGG 2040
AGGCCCAGAT GAAACTTCAT TTTTCCTTAA TGAAAACTTT GATGATCTGG GGTTGTCATT 2100
TTGGGAGTAT CCTTCGACTA CCCAAGATGA TCCAGGAATA CAAGGAACAG ATAATCTGGG 2160
TGAAGTGCAA AACTACCCTG CCACCAATCT ATCTCTGCAT GAGCCAGTTT CTACGGTTAA 2220
TTTGGGCGTG TTAGCACCAG CAGCAAACCA ACCAGAATAT GGGAATGATG GAAGTTTAAA 2280
TAATGCCAAA AATACTTCTC GGAAAAGGAA GAACCCTGCG AATGAAATAA CATCTTTAGA 2340
TGCTTCAGTT CTCATGAGTG GCAATGACGA CGACGACTTT GCTGGGGATA GATCTGGTGG 2400
CACTTCCTCA CTGTCTGGGC AGCCACGGTC AGTTCGACCA AAATCCGTAC TAGCTGTCGA 2460
GTCAGATTCT GATTAGCGTC CATAGGCCCC CGTGCTATTG GTTGGTCGGC GCGGAGGTGT 2520
GAGATGTATG CTGTCCGCTT GGTGGAATGG TTCCTCTGGT TTTGTTTGTG ATCCAGGACT 2580
GACTGTCCCT CCATGTCTGT CTTTCCAAGA AGGATGAAAA TGAACGCAGT GGTACCTATC 2640
TATATAGGAA GCAGTTCTTT TTTCTTTTTC TACCATTTTC CTTTAATGAT TCATGGTGAT 2700
CACTTTGGAG GCAGTAGAAT TTAGGGAAGG GTGCAAAGCT CCTCCATTGT GCCTGCCTGT 2760
AGGCAAAAGT CTGTAGCATA GCTAGCTAGC TAGCAGGAAC TGAGGGTCTG TTGCTGTACA 2820
TGTAGTCTCC CGTCTTTAAA GAGTTTCCTT TTGTTCAGCC TGTGGTAAGA ACTAATATGC 2880
CATGCTTCGA TATTTT 2897
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aet-0041 EMT28925 Aegilops tauschii 99 0.0 1546
WERAM-Hov-0075 MLOC_60545.2 Hordeum vulgare 93 0.0 1442
WERAM-Tru-0038 TRIUR3_19264-P1 Triticum urartu 86 0.0 1439
WERAM-Met-0101 AES88651 Medicago truncatula 49 0.0 657
WERAM-Viv-0034 VIT_06s0004g03180.t01 Vitis vinifera 50 0.0 649
WERAM-Orp-0048 OPUNC05G02000.1 Oryza punctata 49 0.0 649
WERAM-Mua-0008 GSMUA_Achr10P13170_001 Musa acuminata 50 0.0 649
WERAM-Orni-0108 ONIVA10G12200.1 Oryza nivara 48 0.0 648
WERAM-Orr-0050 ORUFI05G01890.1 Oryza rufipogon 48 0.0 648
WERAM-Orl-0083 KN539825.1_FGP005 Oryza longistaminata 48 0.0 647
WERAM-Orb-0050 OBART05G01770.1 Oryza barthii 48 0.0 646
WERAM-Org-0050 ORGLA05G0017700.1 Oryza glaberrima 48 0.0 642
WERAM-Sol-0139 Solyc11g069160.1.1 Solanum lycopersicum 49 0.0 637
WERAM-Arl-0112 fgenesh2_kg.8__ 2005__ AT5G60410.5 Arabidopsis lyrata 47 0.0 636
WERAM-Art-0145 AT5G60410.1 Arabidopsis thaliana 49 0.0 635
WERAM-Glm-0141 GLYMA12G07590.1 Glycine max 49 2e-178 623
WERAM-Brr-0105 Bra020249.1-P Brassica rapa 48 3e-171 599
WERAM-Php-0135 PP1S94_39V6.1 Physcomitrella patens 43 1e-146 518
WERAM-Sem-0107 EFJ20543 Selaginella moellendorffii 43 2e-141 501
WERAM-Orgl-0049 OGLUM05G01840.1 Oryza glumaepatula 47 4e-99 360
WERAM-Zem-0086 GRMZM2G155123_P01 Zea mays 50 6e-89 326
WERAM-Sot-0100 PGSC0003DMT400088246 Solanum tuberosum 42 2e-72 271
WERAM-Brd-0102 BRADI4G26730.1 Brachypodium distachyon 67 9e-45 179
WERAM-Dar-0020 ENSDARP00000066902.4 Danio rerio 31 8e-08 57.0
WERAM-Asm-0049 ENSAMXP00000006513.1 Astyanax mexicanus 34 1e-07 56.6
WERAM-Orla-0168 ENSORLP00000019951.1 Oryzias latipes 34 3e-07 55.1
WERAM-Ten-0136 ENSTNIP00000014334.1 Tetraodon nigroviridis 34 4e-07 54.3
WERAM-Pof-0196 ENSPFOP00000016384.2 Poecilia formosa 37 7e-07 53.9
WERAM-Xim-0052 ENSXMAP00000004648.1 Xiphophorus maculatus 37 8e-07 53.5
WERAM-Lac-0154 ENSLACP00000018064.1 Latimeria chalumnae 44 1e-06 53.1
WERAM-Tar-0194 ENSTRUP00000039967.1 Takifugu rubripes 33 1e-06 53.1
WERAM-Pem-0028 ENSPMAP00000004022.1 Petromyzon marinus 43 1e-06 52.8
WERAM-Orn-0002 ENSONIP00000000116.1 Oreochromis niloticus 33 1e-06 52.8
WERAM-Anc-0072 ENSACAP00000006960.3 Anolis carolinensis 44 2e-06 52.4
WERAM-Leo-0158 ENSLOCP00000019058.1 Lepisosteus oculatus 44 2e-06 52.0
WERAM-Cap-0009 ENSCPOP00000001208.2 Cavia porcellus 44 3e-06 52.0
WERAM-Prc-0142 ENSPCAP00000013150.1 Procavia capensis 42 3e-06 51.6
WERAM-Poa-0164 ENSPPYP00000020053.2 Pongo abelii 42 3e-06 51.6
WERAM-Pat-0163 ENSPTRP00000033495.4 Pan troglodytes 42 3e-06 51.6
WERAM-Otg-0038 ENSOGAP00000002538.2 Otolemur garnettii 44 3e-06 51.6
WERAM-Hos-0004 ENSP00000257745.4 Homo sapiens 41 3e-06 51.6
WERAM-Mum-0094 ENSMUSP00000092569.2 Mus musculus 42 3e-06 51.6
WERAM-Caj-0166 ENSCJAP00000029516.1 Callithrix jacchus 42 3e-06 51.6
WERAM-Tut-0016 ENSTTRP00000001387.1 Tursiops truncatus 42 3e-06 51.6
WERAM-Myl-0033 ENSMLUP00000002454.2 Myotis lucifugus 42 3e-06 51.6
WERAM-Paa-0032 ENSPANP00000012164.1 Papio anubis 42 3e-06 51.6
WERAM-Mam-0206 ENSMMUP00000029929.2 Macaca mulatta 42 3e-06 51.6
WERAM-Chs-0143 ENSCSAP00000007759.1 Chlorocebus sabaeus 42 3e-06 51.6
WERAM-Ptv-0028 ENSPVAP00000003472.1 Pteropus vampyrus 42 3e-06 51.6
WERAM-Dio-0018 ENSDORP00000002187.1 Dipodomys ordii 42 3e-06 51.6
WERAM-Aim-0150 ENSAMEP00000013827.1 Ailuropoda melanoleuca 42 3e-06 51.6
WERAM-Sus-0197 ENSSSCP00000024064.1 Sus scrofa 42 3e-06 51.6
WERAM-Gog-0007 ENSGGOP00000000573.3 Gorilla gorilla 42 3e-06 51.6
WERAM-Tub-0061 ENSTBEP00000007542.1 Tupaia belangeri 42 3e-06 51.6
WERAM-Ova-0014 ENSOARP00000002440.1 Ovis aries 42 3e-06 51.6
WERAM-Mup-0213 ENSMPUP00000018147.1 Mustela putorius furo 42 3e-06 51.6
WERAM-Loa-0050 ENSLAFP00000003655.3 Loxodonta africana 42 3e-06 51.6
WERAM-Vip-0093 ENSVPAP00000008307.1 Vicugna pacos 42 3e-06 51.6
WERAM-Eqc-0129 ENSECAP00000015121.1 Equus caballus 42 3e-06 51.6
WERAM-Caf-0050 ENSCAFP00000006126.3 Canis familiaris 42 3e-06 51.6
WERAM-Bot-0086 ENSBTAP00000012129.5 Bos taurus 42 3e-06 51.6
WERAM-Ere-0106 ENSEEUP00000011549.1 Erinaceus europaeus 42 3e-06 51.6
WERAM-Nol-0095 ENSNLEP00000011036.1 Nomascus leucogenys 42 4e-06 51.6
WERAM-Chh-0015 ENSCHOP00000001410.1 Choloepus hoffmanni 44 4e-06 51.6
WERAM-Dan-0045 ENSDNOP00000004456.3 Dasypus novemcinctus 42 4e-06 51.2
WERAM-Tas-0028 ENSTSYP00000003044.1 Tarsius syrichta 42 4e-06 51.2
WERAM-Anp-0017 ENSAPLP00000002772.1 Anas platyrhynchos 37 5e-06 51.2
Created Date 25-Jun-2016