WERAM Information

Tag Content
WERAM ID WERAM-Sol-0008
Ensembl Protein ID Solyc01g073950.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc01g073950.2 Solyc01g073950.2.1 Solyc01g073950.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.10e-13 51.7 322 390
Organism Solanum lycopersicum
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt   2 ehevsepFrepvdpqleipdYydiikePmdLstikerleegnYss.peefvkDvrlifnNakaynenkss 70 
                         +h+  ++F+++ d  ++  +Y+ +i+++mdL+t+++r++ g Y s p++f+ D+ lifnNa  y  ++ss
  Solyc01g073950.2.1 322 SHKRGSVFKRRLDS-QKTDKYKSMIRQHMDLETVQARIDDGSYCScPSKFYLDLLLIFNNAIVYFAKSSS 390
                         68999*********.8*****************************9******************988876 PP
Protein Sequence
(Fasta)		MEKDSAAATT TTKKTIWSTW EELLLASAVK RHGLKDWESV AMELQNRISL PALLTAQICK 60
EKYRDLRRRF MNSYNNSYDE KIIEQDVDGN GDVTIPWIEE LRKLRVAELQ QEVQRYDLSI 120
QSLELKVKKM EEEREQSLKA QSLDDGQKPD LEDVKEERSQ NDKNSGADVK PEDSTGKPVS 180
SEESDRENRS FNESNSTENR ETGVKNEPEP VEIGEDKPVQ EIKPVSEEDS YNDSSSDRQE 240
EKKARRDSGD LRDTVSGSKE ETRENSDVQS TATLTKRKRQ RGGDGGRSGG DAAEMGSPAV 300
GIKREGAAKS EPLIEFLDVI RSHKRGSVFK RRLDSQKTDK YKSMIRQHMD LETVQARIDD 360
GSYCSCPSKF YLDLLLIFNN AIVYFAKSSS ETTAANELRG IVMEELKRAR TQSKDLSPFK 420
IQPKPELERS DSLLAKHKST VPIVVCRKRS SISAKAAASS GTNKTEKPAD SKPPLNPKPP 480
AVKSSSNEEE SSIKLGVKEK PVTGVRSMRR SSKGRSNNNN ASQSNSNQNT NAKQSNSSGE 540
KKEEVKPEKK KEEGKKRGAA ADFLKRIKKN SPTKGTLVEA LKNNPPEEVV VVKGKNSKDQ 600
QKKKVDERRE APVRRSGGGG GGSGASKDEG SPSKRSVGRP PKRGGREVVV QEKRGRENSE 660
KDDSTKRPKK RSRRRNKRKK LKRKKILSEH VCMELLIFYI PVLFFFQLKK YTIHNIFLRS 720
IIIIHLYLVP NIAIIDFLDY IFQDTVFIIL KK 752
Nucleotide Sequence
(Fasta)		GGAACATAGA ATGGAAAAAG ACTCAGCAGC AGCTACAACG ACGACGAAGA AGACGATATG 60
GAGTACATGG GAAGAGCTTT TGTTAGCGTC TGCTGTGAAA AGGCATGGGC TAAAGGACTG 120
GGAATCTGTA GCCATGGAAC TACAAAATCG TATATCGTTA CCGGCTTTAT TGACCGCTCA 180
AATTTGTAAG GAGAAATACA GGGACCTCCG CCGCCGCTTC ATGAATAGCT ATAACAATAG 240
TTATGATGAA AAAATCATAG AACAGGATGT AGATGGAAAT GGAGATGTAA CGATTCCTTG 300
GATTGAGGAG TTGAGAAAAC TACGGGTTGC TGAGCTTCAA CAAGAGGTTC AACGCTACGA 360
TCTTTCGATC CAGTCGTTGG AGTTGAAAGT GAAAAAAATG GAGGAAGAGA GAGAACAGAG 420
TTTGAAGGCG CAGAGTTTAG ACGATGGCCA GAAACCAGAT CTGGAGGATG TAAAGGAAGA 480
GAGATCGCAA AACGACAAAA ACAGCGGTGC TGATGTTAAG CCGGAGGATT CCACCGGGAA 540
GCCCGTGTCC AGCGAGGAGT CAGACCGCGA AAACCGGTCA TTTAACGAGT CTAATTCGAC 600
GGAGAACAGA GAAACCGGTG TTAAAAATGA ACCGGAACCG GTCGAGATCG GTGAAGACAA 660
ACCGGTTCAG GAGATTAAAC CGGTCAGTGA AGAGGACTCG TATAACGATA GCAGTTCAGA 720
TAGACAGGAG GAAAAGAAAG CCCGTCGGGA CTCGGGCGAT TTACGTGATA CAGTGAGCGG 780
GTCTAAGGAA GAGACTAGGG AAAACAGTGA CGTGCAGAGC ACGGCAACTT TAACGAAGAG 840
AAAACGGCAG CGCGGTGGCG ATGGTGGTAG AAGCGGCGGA GATGCGGCAG AAATGGGTTC 900
TCCAGCCGTT GGAATTAAAA GGGAGGGTGC GGCGAAATCA GAGCCGTTAA TTGAGTTTTT 960
AGATGTTATC AGGTCGCATA AGCGCGGCTC TGTATTCAAG CGCCGGCTAG ACAGCCAGAA 1020
AACGGACAAG TACAAGAGTA TGATCCGACA ACATATGGAT CTTGAAACGG TTCAAGCCCG 1080
GATTGACGAC GGATCCTATT GCTCTTGCCC ATCCAAATTC TACTTGGACC TCCTACTCAT 1140
CTTCAACAAT GCCATCGTCT ACTTCGCTAA GTCATCCTCA GAGACAACTG CAGCGAACGA 1200
ACTCCGTGGC ATTGTAATGG AAGAATTAAA AAGGGCCAGA ACCCAGTCGA AGGATCTATC 1260
ACCATTTAAG ATCCAACCCA AGCCCGAATT GGAGAGATCC GATTCCTTGC TTGCAAAACA 1320
CAAGTCTACC GTTCCTATAG TAGTCTGTCG CAAGAGAAGC TCCATTTCAG CAAAAGCAGC 1380
AGCTTCTTCT GGTACTAACA AGACAGAAAA ACCAGCTGAT AGTAAACCTC CTCTGAACCC 1440
AAAGCCACCT GCGGTAAAAT CTTCTTCGAA TGAAGAAGAG AGTTCAATCA AGCTTGGGGT 1500
GAAAGAAAAG CCAGTGACTG GAGTAAGAAG TATGAGGAGA AGCAGCAAAG GACGTTCGAA 1560
TAATAATAAT GCTTCACAAT CCAACAGCAA CCAAAACACG AATGCTAAGC AAAGCAATAG 1620
TAGCGGGGAG AAAAAGGAAG AGGTGAAACC GGAGAAGAAG AAAGAAGAAG GCAAAAAACG 1680
AGGAGCTGCA GCGGACTTCT TGAAGAGGAT AAAGAAGAAT TCTCCTACGA AAGGAACGTT 1740
GGTGGAAGCG CTGAAGAATA ATCCTCCAGA GGAGGTTGTT GTTGTTAAAG GTAAAAATAG 1800
TAAAGATCAG CAAAAGAAAA AAGTTGATGA ACGGAGAGAA GCTCCAGTGA GGCGAAGTGG 1860
CGGCGGTGGC GGAGGCAGTG GTGCTAGCAA GGATGAAGGT AGTCCGTCGA AGAGGAGCGT 1920
AGGTCGACCA CCGAAGAGAG GTGGTAGAGA AGTAGTTGTG CAGGAAAAAC GTGGAAGGGA 1980
AAATAGTGAA AAAGATGATT CAACGAAACG GCCAAAGAAA CGGTCAAGGA GGAGAAATAA 2040
AAGGAAGAAA CTAAAGAGAA AAAAGATTTT GAGTGAACAT GTTTGTATGG AGCTGTTGAT 2100
TTTTTACATA CCTGTATTAT TCTTTTTCCA GCTCAAAAAA TATACGATAC ATAATATTTT 2160
TCTCCGTTCA ATAATAATTA TTCACCTATA TTTAGTTCCT AATATTGCTA TCATTGATTT 2220
TCTTGATTAC ATTTTTCAAG ACACTGTGTT TATTATATTA AAAAAGTAA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0018 PGSC0003DMT400016153 Solanum tuberosum 91 0.0 694
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 47 3e-119 426
WERAM-Pot-0008 POPTR_0001s23640.1 Populus trichocarpa 41 1e-85 315
WERAM-Glm-0090 GLYMA08G15870.1 Glycine max 39 4e-80 296
WERAM-Thc-0062 EOY09477 Theobroma cacao 38 5e-78 290
WERAM-Arl-0077 fgenesh2_kg.4__ 2627__ AT2G44430.1 Arabidopsis lyrata 42 6e-72 269
WERAM-Brr-0020 Bra004831.1-P Brassica rapa 40 7e-71 266
WERAM-Bro-0065 Bo4g021680.1 Brassica oleracea 41 1e-70 265
WERAM-Prp-0113 EMJ03206 Prunus persica 42 9e-62 236
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 37 2e-60 231
WERAM-Art-0091 AT3G57980.1 Arabidopsis thaliana 35 8e-54 209
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 35 1e-48 192
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 36 7e-46 183
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 35 2e-45 181
WERAM-Ors-0085 OS08T0510700-01 Oryza sativa 35 1e-44 179
WERAM-Orr-0099 ORUFI08G22500.1 Oryza rufipogon 35 1e-44 179
WERAM-Ori-0091 BGIOSGA026697-PA Oryza indica 35 1e-44 179
WERAM-Zem-0018 GRMZM2G022499_P01 Zea mays 35 8e-42 169
WERAM-Brd-0083 BRADI3G40060.1 Brachypodium distachyon 33 2e-39 161
WERAM-Met-0045 AES66032 Medicago truncatula 42 6e-33 140
WERAM-Amt-0004 ERN03421 Amborella trichopoda 31 3e-28 124
WERAM-Sei-0046 Si013408m Setaria italica 43 9e-28 122
WERAM-Tru-0078 TRIUR3_28812-P1 Triticum urartu 30 4e-26 117
WERAM-Orni-0095 ONIVA08G22660.1 Oryza nivara 44 2e-24 111
WERAM-Sob-0110 Sb07g027680.1 Sorghum bicolor 43 3e-23 108
WERAM-Hov-0108 MLOC_75616.3 Hordeum vulgare 39 3e-22 104
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 46 6e-20 97.1
WERAM-Aet-0108 EMT21081 Aegilops tauschii 35 4e-19 94.4
WERAM-Sem-0102 EFJ33930 Selaginella moellendorffii 38 5e-18 90.9
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 42 9e-17 86.7
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 38 3e-14 77.8
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 36 2e-12 72.0
WERAM-Crn-0037 AAW45314 Cryptococcus neoformans 32 6e-08 57.4
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 36 3e-07 54.7
WERAM-Spr-0015 CBQ70270 Sporisorium reilianum 30 1e-06 52.8
WERAM-Orm-0027 OMERI02G22640.1 Oryza meridionalis 30 1e-06 52.8
Created Date 25-Jun-2016