WERAM Information

Tag Content
WERAM ID WERAM-Sob-0122
Ensembl Protein ID Sb09g018370.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb09g018370 Sb09g018370.1 Sb09g018370.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 8.00e-11 42.8 228 278
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    tiC  Cg  ++ + ++++Cd Cd+wfH+kCv ++  +++  +++ Cp+C  
  Sb09g018370.1 228 TICASCGSGYHANGFWICCDVCDRWFHGKCVRITAAQAERIEHYECPECCS 278
                    89*****9999999********************666664469******75 PP
Protein Sequence
(Fasta)		MDSPPPLLAS SPRSALPDHP LHGQATGSPP PPLLTSAPCS PLPAEPLLHG KATGAPAAAA 60
FCPPSYTAEW IFRDFACRRA ALVRALTSDE KAFSRKCNQG TSETLYLYGN SDVSWEVRPQ 120
KFMPLGQPEP MMLGIKLVRG NMKRIKWLRH IAMHCDAWLI RISSFLGANL ETRSRSRMGP 180
MSRQRLSDRM NSLQTVLETL IASDTYQRIC RVEKANEDED EGCGTEPTIC ASCGSGYHAN 240
GFWICCDVCD RWFHGKCVRI TAAQAERIEH YECPECCSDK KGHDYNVDPM LSVLYKRY 298
Nucleotide Sequence
(Fasta)		ATGGACTCTC CCCCGCCCCT GCTCGCGAGC TCTCCACGCT CGGCGCTACC GGACCATCCT 60
CTGCACGGCC AGGCTACGGG TTCTCCTCCG CCGCCCCTGC TCACCAGCGC TCCATGCTCG 120
CCGCTACCAG CCGAGCCGCT CCTGCACGGC AAGGCCACGG GAGCGCCCGC GGCGGCGGCG 180
TTCTGCCCGC CGTCGTACAC CGCGGAGTGG ATCTTCAGGG ACTTCGCTTG CCGCCGCGCC 240
GCCTTGGTCC GCGCCCTCAC CTCAGATGAG AAGGCGTTCT CTCGCAAGTG CAACCAAGGT 300
ACATCAGAGA CCCTGTATCT GTATGGCAAT AGTGATGTGA GTTGGGAGGT GCGGCCACAG 360
AAGTTCATGC CGCTGGGGCA GCCTGAGCCA ATGATGCTCG GCATCAAACT AGTGAGGGGC 420
AACATGAAAC GCATAAAATG GCTCAGACAC ATCGCCATGC ACTGTGACGC ATGGCTCATT 480
CGTATCTCCT CATTCCTTGG TGCCAATTTG GAGACTAGAT CAAGATCACG TATGGGACCA 540
ATGAGCAGGC AGCGTTTATC TGATAGGATG AACAGTCTGC AAACTGTTCT TGAAACACTC 600
ATTGCTAGTG ACACGTATCA ACGCATATGC CGTGTGGAAA AAGCGAATGA GGATGAGGAT 660
GAAGGCTGTG GTACTGAGCC AACCATCTGT GCAAGCTGTG GCAGCGGCTA CCATGCAAAT 720
GGGTTCTGGA TTTGTTGTGA TGTGTGTGAC CGTTGGTTTC ATGGTAAATG TGTGAGGATA 780
ACAGCAGCTC AAGCGGAGAG AATAGAGCAC TATGAATGCC CTGAGTGCTG CTCCGACAAG 840
AAAGGGCATG ATTACAATGT GGACCCAATG CTTTCTGTTC TGTATAAGCG ATACTAG 898
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0087 Si023053m Setaria italica 74 1e-98 357
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 40 6e-40 161
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 40 6e-40 161
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 40 6e-40 161
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 40 7e-40 161
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 40 1e-39 160
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 40 1e-39 160
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 40 1e-39 160
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 39 2e-39 160
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 39 9e-39 157
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 41 1e-38 157
WERAM-Lep-0044 LPERR03G33070.1 Leersia perrieri 38 2e-38 156
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 38 9e-38 154
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 38 1e-37 154
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 34 2e-37 153
WERAM-Prp-0085 EMJ19499 Prunus persica 38 3e-37 152
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 34 3e-37 152
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 37 4e-37 152
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 39 8e-37 151
WERAM-Brr-0085 Bra016698.1-P Brassica rapa 35 1e-36 150
WERAM-Thc-0059 EOY07191 Theobroma cacao 38 1e-35 147
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 37 1e-35 147
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 35 2e-35 146
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 33 2e-35 146
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 36 2e-35 146
WERAM-Arl-0043 fgenesh2_kg.1__ 1579__ AT1G14510.1 Arabidopsis lyrata 32 4e-35 145
WERAM-Met-0092 KEH28874 Medicago truncatula 35 6e-35 145
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 35 8e-35 144
WERAM-Amt-0032 ERN11177 Amborella trichopoda 32 2e-34 144
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 32 2e-34 143
WERAM-Tru-0101 TRIUR3_35276-P1 Triticum urartu 32 2e-34 143
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 36 7e-34 141
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 36 7e-34 141
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 31 5e-33 139
WERAM-Aet-0106 EMT19247 Aegilops tauschii 32 3e-32 135
Created Date 25-Jun-2016