WERAM Information

Tag Content
WERAM ID WERAM-Sob-0081
Ensembl Protein ID Sb05g004810.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb05g004810 Sb05g004810.1 Sb05g004810.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.70e-25 88.3 76 380
Organism Sorghum bicolor
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   3 hevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                    h+  + F+epvdp    ipdY+d+i++PmdL t+k++l +++Y s+eef++Dvrl f+Na++yn+++++v
  Sb05g004810.1  76 HKGGWLFKEPVDPVlYGIPDYFDVIHNPMDLGTVKNKLTKKQYVSIEEFAADVRLTFSNAMKYNPPENDV 145
                    6778**************************************************************9997 PP
      BROMO.txt  29 PmdLstikerleeg 42 
                    P++L++ kerle++
  Sb05g004810.1 367 PVKLKLEKERLEKR 380
                    9999999****986 PP
Protein Sequence
(Fasta)		MMTQACKKRR GVYISSESGD SDTDSDVEGI KLCRKSGVPS ISTCQHQSSY KVKAASMKSS 60
RMIRLCGNIV RKLIDHKGGW LFKEPVDPVL YGIPDYFDVI HNPMDLGTVK NKLTKKQYVS 120
IEEFAADVRL TFSNAMKYNP PENDVHKVAK ELNGIFDSEW ESVERKFRVQ NPVQEQQTMK 180
AIKVRGIMDS KSTVPRELVA CSNSKPLVAR GPVACSNLIA NKTLTDVLSS KVKIKFSVRS 240
SERTSSKDIP VQAAGSKERS LNHSVPTGNK KASLNCTLPC TKENAKISRI RESDRSSGSI 300
GNGSLLCNDT STSPLASSAQ GEESYLHDEP LSPSKALRAA MLRSRFAGTI VKAQQKALLD 360
HGKNIDPVKL KLEKERLEKR QQEEKARIEA QVKAAEAAAQ RKFDEEMRMK REREREAARL 420
ALRMMKKTVD IDNSDFLKEL ENFSETWQSN PPGKLIVDFI DGDLPPGLGS PLERLGLFMK 480
NDFEDEVEQE MEDSGSPSMD VDMRKDFQEG VGHEMQDSIS PVTVTSTKND LQGAEGHEME 540
DSVSPSTVIE TKKGSEEERE HDIVDSISPS TVIDTKKDSE ETEHEMVDSV SPLMDVDTEE 600
GEISC 605
Nucleotide Sequence
(Fasta)		ATGATGACGC AAGCCTGTAA GAAGAGGAGA GGGGTTTATA TAAGCAGTGA ATCGGGAGAC 60
TCTGATACAG ATTCTGATGT TGAGGGAATC AAACTCTGTC GAAAGTCTGG GGTGCCATCA 120
ATTTCTACAT GCCAGCACCA GTCATCTTAT AAGGTCAAGG CTGCAAGTAT GAAAAGTAGC 180
AGGATGATAA GGCTGTGTGG AAATATCGTA AGGAAGCTCA TCGATCACAA AGGTGGCTGG 240
CTTTTCAAAG AACCTGTTGA TCCAGTGCTA TATGGGATTC CCGATTACTT TGATGTTATC 300
CACAACCCAA TGGATTTGGG TACTGTAAAG AATAAACTCA CAAAAAAACA ATATGTAAGC 360
ATTGAGGAGT TCGCAGCAGA TGTGAGGCTA ACATTTTCAA ATGCTATGAA GTATAATCCT 420
CCAGAAAATG ATGTACATAA GGTCGCTAAA GAATTGAATG GGATATTCGA TTCAGAATGG 480
GAATCAGTAG AAAGGAAATT TAGGGTCCAA AACCCTGTGC AAGAGCAGCA GACAATGAAG 540
GCCATAAAAG TTCGAGGTAT CATGGATTCA AAGTCTACGG TTCCTAGAGA GCTGGTAGCA 600
TGCTCAAATT CAAAACCTTT GGTTGCTAGA GGGCCAGTAG CTTGCTCAAA TTTGATTGCA 660
AACAAGACAC TGACAGACGT GTTATCCTCC AAAGTAAAAA TCAAATTTTC CGTGCGCAGC 720
TCTGAGCGTA CCTCTTCCAA AGATATACCT GTTCAAGCAG CTGGTAGCAA AGAGAGGTCC 780
TTAAATCACT CTGTTCCTAC TGGCAACAAA AAGGCATCTT TAAATTGTAC TCTTCCTTGC 840
ACGAAGGAGA ATGCTAAAAT TTCAAGGATA CGAGAATCTG ACCGCAGCTC TGGTTCAATT 900
GGAAATGGAT CGTTGTTATG CAATGACACT TCTACTTCGC CTCTTGCTTC CTCTGCGCAA 960
GGTGAGGAAA GTTACCTTCA TGATGAACCT TTATCACCAA GCAAAGCTCT TCGTGCAGCA 1020
ATGCTCAGGA GTCGTTTTGC TGGGACTATC GTGAAGGCTC AACAGAAGGC ACTTTTGGAT 1080
CATGGGAAGA ATATAGACCC TGTAAAATTG AAATTGGAAA AGGAGAGGCT GGAAAAGAGG 1140
CAGCAAGAAG AGAAAGCAAG GATTGAGGCC CAGGTGAAGG CTGCTGAAGC AGCTGCACAA 1200
CGGAAGTTCG ATGAAGAAAT GAGGATGAAG AGAGAGCGTG AAAGGGAAGC GGCACGGCTG 1260
GCACTACGCA TGATGAAGAA GACTGTTGAT ATTGACAACA GTGACTTCCT AAAGGAGCTG 1320
GAGAACTTCA GCGAAACGTG GCAGTCGAAT CCACCTGGCA AATTAATCGT GGACTTTATT 1380
GATGGGGACT TGCCACCGGG GTTAGGGAGC CCGTTGGAGA GGCTTGGCCT GTTCATGAAG 1440
AATGATTTCG AGGATGAGGT GGAACAGGAA ATGGAGGACA GCGGATCACC CTCGATGGAC 1500
GTTGACATGA GGAAAGATTT CCAGGAAGGC GTAGGGCATG AAATGCAGGA CAGCATATCA 1560
CCCGTGACGG TCACTAGCAC GAAGAATGAC TTACAGGGAG CGGAAGGGCA TGAAATGGAG 1620
GACAGCGTAT CACCATCCAC AGTCATTGAG ACAAAGAAAG GTTCCGAAGA AGAGAGAGAA 1680
CATGATATAG TAGACAGCAT ATCACCATCC ACAGTTATTG ACACAAAGAA AGATTCTGAA 1740
GAGACTGAAC ATGAGATGGT GGACAGCGTA TCACCTTTGA TGGATGTTGA CACGGAGGAA 1800
GGGGAGATCA GCTGCTGACG GTAGCCGCAC CTCTTGTCAT CATCCACATA ATTTATTGAC 1860
ATCCTTGCTG GGTTGTTAGA TTAGGCGACC TCATAAGCAG AGTGATGAAG AAAACTTTAG 1920
ATTGCTGTGG TTGCGTCGTA GAACCATGTG GAGAACATGT GTCAGACGAA CTGAGTAGTG 1980
GTTTTGGCTT TGCTGCGGAT TTTAATTTTC GTGGTCTTGT CAGCCAGGGT AAGAGTAAGA 2040
TAACTCCGCT GTATGTTGGA TTTGTTATTA GCTAGTGTGA GCTCGTCGGC TGGATGACCT 2100
GTATAAAAAG ATGAGGGAAA AAAAGAGGGT AATATAGTGC TGGTATATAT TGTAGGAGCT 2160
TATGGTGGAG CCGGTTGCAG GACACAAGCT ATAGTACAGC ATTGTTCCCA GATTGTGGTC 2220
GGTGCACCGT AGTACCTTGT TACTGTATTC ATTCTAAAAC TTAAATAAAA TGATGCCAGT 2280
CGCACAAGT
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0095 GRMZM2G169688_P01 Zea mays 82 0.0 837
WERAM-Sei-0094 Si026157m Setaria italica 75 0.0 773
WERAM-Brd-0049 BRADI2G34827.1 Brachypodium distachyon 65 5e-160 561
WERAM-Ori-0085 BGIOSGA025772-PA Oryza indica 66 1e-135 481
WERAM-Orni-0076 ONIVA07G15550.1 Oryza nivara 66 5e-135 478
WERAM-Ors-0069 OS07T0507700-01 Oryza sativa 66 7e-135 478
WERAM-Org-0076 ORGLA07G0128000.1 Oryza glaberrima 66 7e-135 478
WERAM-Orb-0076 OBART07G15690.1 Oryza barthii 66 7e-135 478
WERAM-Orbr-0085 OB07G21530.1 Oryza brachyantha 64 3e-133 473
WERAM-Orr-0078 ORUFI07G16200.1 Oryza rufipogon 63 6e-126 448
WERAM-Orgl-0073 OGLUM07G15360.1 Oryza glumaepatula 63 2e-125 447
WERAM-Orp-0073 OPUNC07G14460.1 Oryza punctata 64 3e-124 442
WERAM-Lep-0111 LPERR11G14070.1 Leersia perrieri 61 2e-115 414
WERAM-Tra-0311 Traes_7BL_C3CE8540D.1 Triticum aestivum 67 6e-107 385
WERAM-Orl-0088 KN539984.1_FGP007 Oryza longistaminata 57 4e-98 356
WERAM-Orm-0073 OMERI07G12670.1 Oryza meridionalis 59 1e-66 251
WERAM-Pot-0014 POPTR_0001s36530.1 Populus trichocarpa 39 6e-55 213
WERAM-Viv-0064 VIT_10s0003g02240.t01 Vitis vinifera 36 3e-50 197
WERAM-Thc-0078 EOY27851 Theobroma cacao 36 3e-50 197
WERAM-Glm-0192 GLYMA15G09620.1 Glycine max 39 4e-49 193
WERAM-Prp-0052 EMJ13574 Prunus persica 38 2e-46 184
WERAM-Met-0039 AES64085 Medicago truncatula 42 2e-46 184
WERAM-Amt-0037 ERN14948 Amborella trichopoda 36 3e-41 167
WERAM-Mua-0077 GSMUA_Achr4P27780_001 Musa acuminata 51 1e-39 162
WERAM-Arl-0014 Al_scaffold_0008_162 Arabidopsis lyrata 34 3e-37 154
WERAM-Bro-0037 Bo2g130230.1 Brassica oleracea 33 1e-35 148
WERAM-Art-0138 AT5G46550.1 Arabidopsis thaliana 63 4e-35 147
WERAM-Brr-0114 Bra022044.1-P Brassica rapa 34 4e-35 147
WERAM-Sol-0025 Solyc02g071510.2.1 Solanum lycopersicum 47 2e-34 144
WERAM-Sot-0022 PGSC0003DMT400018643 Solanum tuberosum 47 3e-34 144
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 46 2e-28 124
WERAM-Aet-0072 EMT26738 Aegilops tauschii 46 2e-28 124
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 50 7e-28 122
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 47 1e-27 122
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 44 2e-27 121
WERAM-Pem-0074 ENSPMAP00000008062.1 Petromyzon marinus 45 6e-24 109
WERAM-Pof-0102 ENSPFOP00000009161.2 Poecilia formosa 45 1e-23 109
WERAM-Xim-0169 ENSXMAP00000013871.1 Xiphophorus maculatus 45 2e-23 108
WERAM-Scj-0017 EEB07604 Schizosaccharomyces japonicus 39 2e-23 108
WERAM-Tar-0198 ENSTRUP00000040915.1 Takifugu rubripes 45 3e-23 107
WERAM-Ten-0035 ENSTNIP00000006103.1 Tetraodon nigroviridis 45 4e-23 107
Created Date 25-Jun-2016