WERAM Information

Tag Content
WERAM ID WERAM-Sob-0073
Ensembl Protein ID Sb04g025160.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb04g025160 Sb04g025160.1 Sb04g025160.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 5.90e-25 88 185 254
Organism Sorghum bicolor
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   3 hevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                    +++s +F+ pvd + l+ipdY+di+k+PmdL t++++le+g Y+sp++f++Dvrl fnNa+ayn++++ v
  Sb04g025160.1 185 QKYSHIFNVPVDVDkLQIPDYFDIVKTPMDLGTVQKKLESGSYTSPSDFAADVRLTFNNAMAYNPKGHAV 254
                    7899*************************************************************99876 PP
Protein Sequence
(Fasta)		MTPTVLMEFG QHRPIKRGYE EMAFRGVAAA TSRGYTETVG ESEVAAGSPV RVDSEDSWAP 60
KRKCISLNSD GFDVKREIFV PSKMSSSERR YLRKRFRAEL DSVRDLLKKP EFAAPVPLSR 120
APALSSSAAP RAKKPQKSQR GVTNVIRGAK GRFLPTKPRP EPTTVLSEAA VFKQCEAILK 180
KLMTQKYSHI FNVPVDVDKL QIPDYFDIVK TPMDLGTVQK KLESGSYTSP SDFAADVRLT 240
FNNAMAYNPK GHAVHDMAIQ LNKMFESRWR PIEKKLASAA TEKHVEVDRA DSKRRKTPPV 300
DRSDVSTEGV RQTEPEKPKM TAEEREAFGN SLASISDELP PHIFELLQQC IDSNTDMPGD 360
GEIEIDIQAV SDDMLFELKK HVDKYLQERE QSQQVKSEPS ENEAVNVSGL SHSSTNPCKG 420
GEPIEEDVDI CGNASPIMLD KDAQIRSSKC GSPSSSSSDS ESSSSDSDSG SDSESESEKV 480
GSPGKLAKGT KKPDQLVEQE KSDVISPADA NRPADIVGLH GEDSESKPAP GGENSKPDSQ 540
VSPDRLLRAA LLRSRYADVI VKARGILSQG GDKQEELEKL QKEEKARLLA EGNAAMEARR 600
AEAEAEAKRK RDFEREKARQ ALQEMERTVE INDNLHIKDL EMLGTATTEH IVSSVDETSP 660
ERSQDGMAGY HPGSVNPLEQ LGLFIKADDE EDDEEPSSVP SIKEPEEGEI N 711
Nucleotide Sequence
(Fasta)		CTGCGCGTCA CAGTCGCATC GCTTCTACTC CTAGTTCGGG TCTCACCTCT CGTGCGCAAA 60
GCAGTAGCGG GTTCGGGTTC GGTCGCCTGG AGAAGGAAAA AAAAAAGGAT AAGCAAGCTG 120
CAGCACGGAG ACGACTCGAC TCGAGCGGCG AAGGCGAAAA ATAAAAAAAA GAGGATAAGG 180
CGAGGCGCGA CCGGGCGGCC ACCGCGCGCT CCCAGATCCG TCCCGCTCCC GAGCGGATCC 240
AGCTCCCCGG CGAGCCCGCG CGTGGACGCC GTTGCCTCGC TCCCGGATCC CGACCGTGGG 300
GTTGCAGCTG CTTCAGATCC AGCGTTACCA GATCTGTGAC CCGCTGGCGC CTGGGCACAT 360
GACACCGACG GTCTTAATGG AGTTTGGGCA GCACAGGCCA ATAAAACGGG GGTATGAGGA 420
AATGGCTTTC AGGGGCGTGG CGGCAGCCAC ATCCCGTGGT TACACAGAGA CTGTTGGCGA 480
GTCGGAAGTC GCAGCTGGTA GTCCTGTTCG TGTCGATTCG GAGGACTCTT GGGCACCAAA 540
GCGCAAGTGC ATCAGCCTGA ACAGCGATGG CTTTGATGTG AAGCGGGAGA TCTTTGTGCC 600
GTCTAAGATG TCGTCATCTG AACGGCGGTA TCTTCGGAAG AGATTCCGGG CAGAGCTTGA 660
TTCTGTGCGG GATCTCCTCA AGAAACCAGA GTTTGCAGCC CCCGTTCCTC TCAGTCGGGC 720
ACCTGCCTTG TCATCCTCAG CTGCCCCTCG AGCCAAGAAG CCACAGAAGT CTCAGCGTGG 780
TGTGACCAAT GTTATCCGTG GTGCAAAGGG ACGTTTCTTG CCTACAAAAC CTCGACCTGA 840
ACCTACTACG GTGTTATCTG AAGCTGCAGT GTTTAAGCAG TGTGAAGCTA TTTTGAAGAA 900
GCTTATGACT CAGAAATATA GTCATATATT CAATGTTCCA GTTGATGTAG ACAAGCTGCA 960
AATTCCTGAT TATTTTGATA TTGTCAAGAC CCCAATGGAT CTTGGAACTG TCCAGAAGAA 1020
GCTTGAATCT GGCTCATACA CAAGTCCATC AGATTTTGCT GCTGATGTCA GGCTGACCTT 1080
TAACAATGCT ATGGCTTATA ATCCCAAGGG GCATGCTGTG CATGACATGG CCATCCAGCT 1140
GAACAAGATG TTTGAGAGTC GATGGAGGCC AATTGAGAAG AAGCTGGCTT CTGCTGCCAC 1200
TGAGAAACAT GTTGAGGTTG ACAGGGCTGA CTCGAAGAGG AGGAAGACAC CTCCTGTGGA 1260
CCGCAGTGAT GTGTCAACGG AAGGTGTACG GCAGACAGAG CCTGAAAAAC CAAAGATGAC 1320
AGCTGAAGAG AGAGAAGCCT TTGGGAACTC CTTGGCTTCT ATATCTGATG AGTTACCTCC 1380
CCACATCTTT GAACTGCTGC AACAATGCAT CGACAGCAAT ACAGATATGC CTGGTGATGG 1440
AGAGATAGAG ATTGACATCC AAGCTGTCAG TGATGACATG CTATTTGAGC TGAAGAAACA 1500
TGTCGACAAG TATTTGCAAG AGAGAGAGCA GAGCCAGCAG GTGAAATCTG AGCCTTCTGA 1560
GAATGAAGCT GTGAATGTAT CTGGCCTTAG CCACTCATCT ACAAATCCTT GCAAAGGTGG 1620
TGAGCCTATC GAGGAGGATG TGGATATCTG TGGCAATGCC TCCCCTATCA TGTTAGACAA 1680
AGATGCACAA ATCAGGAGTA GCAAGTGCGG TAGTCCAAGT AGTTCCAGCA GCGACTCTGA 1740
ATCATCTTCT AGCGATTCCG ACTCTGGCAG TGACTCTGAA AGTGAATCAG AAAAAGTTGG 1800
CAGCCCTGGA AAGCTTGCGA AGGGGACTAA GAAACCTGAC CAGCTGGTGG AGCAAGAAAA 1860
GAGTGATGTT ATTAGCCCAG CCGATGCCAA CCGTCCTGCT GATATTGTGG GACTCCATGG 1920
GGAGGACAGT GAGTCAAAAC CTGCACCAGG GGGGGAAAAC TCAAAACCCG ATTCACAAGT 1980
CTCACCGGAC AGGCTATTGC GTGCCGCCCT TTTGAGGAGC CGTTATGCTG ATGTGATTGT 2040
CAAAGCTCGC GGCATTCTTA GTCAGGGTGG AGACAAACAG GAGGAACTGG AAAAGCTCCA 2100
GAAGGAAGAG AAAGCACGTT TGTTGGCTGA GGGTAATGCA GCCATGGAGG CTCGTAGAGC 2160
CGAAGCTGAA GCGGAAGCTA AGCGTAAACG GGATTTTGAG AGGGAGAAGG CTCGTCAGGC 2220
CCTACAAGAG ATGGAGAGAA CTGTAGAAAT TAATGATAAC CTCCATATCA AGGATTTGGA 2280
AATGCTTGGG ACAGCCACAA CAGAACATAT TGTAAGCTCT GTTGATGAGA CTAGTCCAGA 2340
GCGCTCTCAA GATGGCATGG CCGGCTATCA TCCAGGATCT GTCAATCCTT TGGAGCAACT 2400
TGGACTGTTC ATAAAGGCCG ATGATGAGGA AGATGATGAA GAACCGAGCA GTGTTCCCAG 2460
CATTAAAGAA CCAGAGGAAG GAGAGATCAA CTGATGGTGC TGTGTTTTGC CATGCCCTGT 2520
CAAGGGCTAG AGGCTGGTGC CAAACTAGTG ATCCAACAAA GTGATCGCCT CTTGTGGGCC 2580
ATCATGTGTG GCACAATGGC TGGACAGCAG CGCGTGTTGG ATGCTCAATT GGTTCTGAAC 2640
TGGTGGTGAA AGCCCTCCTC CATATTGCTG CTACTGGTTT GTTAAAATAT GCTTGGGAAG 2700
GATGAAGGTA ATCTTTGCAT GATTGGTAAA TGAGTGGTCA TTTGCTTCGA GGAGGCGCAC 2760
AGGAGGTCGA GTTGGTCAAA TGAACGTATT GATGTGCCTA GAGGATGTTT TTTCAGCCAC 2820
CGTTCCAAAA CGGCTTGAAT GATGCCACCG AACTAGTGGA GTTCAAATTG CTCATTATTT 2880
GCTGCAACCT CCATTTCAAG CCGGTTTGCT CAGCGGCTCA TATAGCCTGT TTTCTCATCT 2940
TTTTCTCTGT TTTAGATTGT GTAGCAGTTG GGCTAGTTGC TTCCTGCTGT AAATCCGAAT 3000
TTTGATGTAG TGAAGGAAGT GCTAGCTGTT TGTTGAGCAC GAGCGAAAAG AACTGCTCTT 3060
GCTCAGCATT TACAAGAGAA ATTGTTTTGC AGATGCACGT CCAGTCTTCT CTGTAATTAC 3120
CATTTCTTGC GCAATCAGTG TCTTCCGTGT GACATTTGTT CATCAGTGTT TTGAAGCGGC 3180
ACCTTCCATC GAAGGGACGC CTCAATTAGT GTTAGTAATT AGCAGTTAGT CCTTTCGACG 3240
CT 3243
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0009 GRMZM2G006707_P01 Zea mays 93 0.0 1040
WERAM-Sei-0065 Si016501m Setaria italica 90 0.0 1016
WERAM-Ori-0018 BGIOSGA006099-PA Oryza indica 81 0.0 910
WERAM-Ors-0023 OS02T0601800-01 Oryza sativa 81 0.0 907
WERAM-Org-0025 ORGLA02G0198800.1 Oryza glaberrima 81 0.0 907
WERAM-Orb-0025 OBART02G23090.1 Oryza barthii 80 0.0 898
WERAM-Orbr-0029 OB02G30530.1 Oryza brachyantha 82 0.0 896
WERAM-Orl-0061 KN539183.1_FGP004 Oryza longistaminata 79 0.0 894
WERAM-Orp-0024 OPUNC02G21060.1 Oryza punctata 79 0.0 894
WERAM-Orr-0024 ORUFI02G24500.1 Oryza rufipogon 78 0.0 891
WERAM-Orgl-0026 OGLUM02G23450.1 Oryza glumaepatula 74 0.0 870
WERAM-Brd-0087 BRADI3G47960.1 Brachypodium distachyon 77 0.0 851
WERAM-Tra-0247 Traes_6AL_37293D4A7.1 Triticum aestivum 77 0.0 840
WERAM-Aet-0049 EMT04068 Aegilops tauschii 75 0.0 810
WERAM-Tru-0018 TRIUR3_07786-P1 Triticum urartu 72 0.0 785
WERAM-Hov-0096 MLOC_70538.1 Hordeum vulgare 73 0.0 776
WERAM-Orni-0024 ONIVA02G26010.1 Oryza nivara 80 0.0 773
WERAM-Orm-0027 OMERI02G22640.1 Oryza meridionalis 80 0.0 769
WERAM-Lep-0030 LPERR02G18800.1 Leersia perrieri 80 0.0 746
WERAM-Viv-0092 VIT_14s0171g00380.t01 Vitis vinifera 39 5e-91 333
WERAM-Mua-0116 GSMUA_Achr8P08920_001 Musa acuminata 42 3e-84 310
WERAM-Thc-0044 EOY02687 Theobroma cacao 38 9e-82 302
WERAM-Prp-0035 EMJ12094 Prunus persica 39 1e-79 295
WERAM-Glm-0208 GLYMA16G06710.1 Glycine max 38 2e-78 291
WERAM-Pot-0133 POPTR_0012s09600.1 Populus trichocarpa 38 3e-74 277
WERAM-Met-0065 KEH34972 Medicago truncatula 35 4e-67 253
WERAM-Sot-0041 PGSC0003DMT400039290 Solanum tuberosum 38 5e-67 253
WERAM-Arl-0087 fgenesh2_kg.5__ 500__ AT3G27260.1 Arabidopsis lyrata 40 1e-65 248
WERAM-Amt-0007 ERN06807 Amborella trichopoda 45 5e-65 246
WERAM-Art-0078 AT3G27260.1 Arabidopsis thaliana 38 3e-62 237
WERAM-Bro-0170 Bo9g017610.1 Brassica oleracea 38 2e-61 234
WERAM-Sol-0051 Solyc03g111090.2.1 Solanum lycopersicum 45 8e-60 229
WERAM-Brr-0125 Bra025262.1-P Brassica rapa 46 4e-54 210
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 34 2e-38 158
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 35 6e-36 150
Created Date 25-Jun-2016