WERAM Information

Tag Content
WERAM ID WERAM-Pot-0154
Ensembl Protein ID POPTR_0016s10900.1
Gene Name POPTR_0016s10900g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0016s10900 POPTR_0016s10900.1 POPTR_0016s10900.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.00e-12 47 67 219
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt  16 e.................mvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         e                 ++ Cd+C+++fH  C +l+  ++p+g +wyC++C++
  POPTR_0016s10900.1  67 EahagwatrkkpyayggdLLLCDGCPRAFHKGCASLS--TVPSG-DWYCQHCQN 117
                         133444444455566666889****************..*****.*******86 PP
             PHD.txt   4 ClvCg.....kddegekemvqCdeCddwfHlkCvklp....lsslpegkswy.CpsC 50 
                         C +C+     ++++g ++++ Cd+C++ fH+ C+       l++lp+g +w+ C  C
  POPTR_0016s10900.1 164 CALCRgydfmRSGFGPRTIILCDQCEKEFHVGCLRSHkmanLKELPKG-NWFcCMDC 219
                         999953444444444555****************999899999*****.87725566 PP
Protein Sequence
(Fasta)		MPGSRVDPPG RSGDQRLHRL VFEEGGLPDG TELAYYARGQ KLLGGYKRGF GILCHCCNCE 60
VSPSTFEAHA GWATRKKPYA YGGDLLLCDG CPRAFHKGCA SLSTVPSGDW YCQHCQNTFQ 120
REKFVEHNAN AFAAGRVSEI DSIEQITKRC FRIVKNVEAE LTGCALCRGY DFMRSGFGPR 180
TIILCDQCEK EFHVGCLRSH KMANLKELPK GNWFCCMDCS RIHSTLQKLL IRGAEKLPDS 240
LLNDIKKKHE EKGLNISNSI DVRWTLLSGK IASPENKLLL SRALSIFQEC FDPIVDSTIG 300
RDLIPLMVYG KNSKGQDYGG MYCAVLIVNS CIVSAGILRV FGEEVAELPL VATRNGDHGK 360
GYFQLLFSCI EKLLAFLNVQ NLVLPAAEEA ESIWIEKFGF QKIKPEQLSK YRKNCCQMVR 420
FEGTSMLQKA VPTCKIVNQS IESIGLCRKE
Nucleotide Sequence
(Fasta)		ATGCCCGGGT CCCGGGTCGA CCCGCCGGGC CGGTCCGGAG ATCAGCGGTT GCATAGATTG 60
GTTTTTGAGG AAGGTGGATT GCCTGATGGA ACTGAACTAG CATACTATGC TCGTGGGCAG 120
AAATTGCTTG GCGGGTATAA AAGGGGCTTT GGAATACTTT GTCATTGCTG CAACTGTGAG 180
GTCAGCCCCT CAACGTTCGA AGCTCATGCA GGATGGGCTA CTCGCAAAAA ACCCTATGCA 240
TATGGCGGGG ATCTTCTGCT TTGTGATGGA TGCCCAAGGG CCTTCCATAA AGGATGTGCT 300
TCTCTATCAA CTGTTCCCAG TGGCGATTGG TATTGCCAGC ATTGCCAGAA TACGTTCCAA 360
AGGGAAAAGT TTGTTGAGCA TAATGCAAAT GCTTTCGCAG CTGGAAGGGT TTCAGAAATT 420
GATTCTATAG AACAGATAAC TAAGAGATGC TTTCGTATTG TAAAAAATGT AGAAGCTGAA 480
CTTACAGGAT GCGCATTATG CAGAGGTTAT GATTTTATGA GATCTGGATT TGGTCCACGC 540
ACAATTATAC TTTGTGATCA GTGTGAGAAA GAATTTCATG TTGGCTGTTT AAGGAGTCAT 600
AAGATGGCAA ATCTGAAGGA ACTGCCAAAA GGGAACTGGT TTTGTTGCAT GGATTGCAGT 660
AGGATCCATT CTACTTTGCA GAAGTTGCTC ATTCGTGGGG CTGAAAAACT CCCAGACTCT 720
CTTTTGAATG ATATAAAGAA GAAGCATGAG GAAAAAGGTT TAAACATCAG TAACAGTATT 780
GATGTGAGAT GGACGCTTCT TAGTGGAAAA ATTGCTTCTC CAGAAAATAA GCTTTTACTC 840
TCACGGGCTC TTTCTATTTT TCAAGAATGT TTTGATCCTA TAGTTGATTC AACAATTGGA 900
CGTGATCTTA TTCCTTTGAT GGTTTATGGT AAGAACTCAA AGGGCCAAGA TTATGGGGGA 960
ATGTACTGTG CAGTGTTAAT AGTCAACTCA TGTATCGTAT CAGCGGGTAT ACTAAGAGTT 1020
TTTGGGGAAG AAGTTGCAGA ACTTCCCTTG GTTGCAACAA GGAATGGTGA CCATGGCAAG 1080
GGATACTTTC AATTACTGTT CTCCTGCATA GAGAAGTTGT TGGCGTTTTT AAATGTGCAG 1140
AATCTTGTGC TTCCAGCCGC TGAAGAGGCC GAATCAATAT GGATCGAAAA ATTTGGTTTT 1200
CAGAAGATAA AACCTGAGCA GCTTAGCAAA TATAGAAAAA ACTGCTGCCA GATGGTGCGA 1260
TTTGAAGGGA CATCTATGCT ACAGAAAGCG GTTCCCACCT GTAAAATTGT TAATCAAAGT 1320
ATCGAGTCCA TTGGATTATG TAGAAAGGAG TAA 1354
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0061 EOY08018 Theobroma cacao 70 0.0 699
WERAM-Prp-0031 EMJ05208 Prunus persica 70 0.0 684
WERAM-Met-0159 AES81946 Medicago truncatula 67 0.0 664
WERAM-Glm-0253 GLYMA19G37190.2 Glycine max 68 0.0 651
WERAM-Sol-0128 Solyc10g083800.1.1 Solanum lycopersicum 62 2e-174 609
WERAM-Sot-0011 PGSC0003DMT400009967 Solanum tuberosum 62 2e-170 596
WERAM-Art-0054 AT2G36720.1 Arabidopsis thaliana 59 1e-167 587
WERAM-Arl-0074 fgenesh2_kg.4__ 1712__ AT2G36720.1 Arabidopsis lyrata 59 2e-166 582
WERAM-Bro-0084 Bo4g186380.1 Brassica oleracea 58 2e-162 569
WERAM-Brr-0090 Bra017226.1-P Brassica rapa 56 4e-159 558
WERAM-Viv-0053 VIT_08s0007g04490.t01 Vitis vinifera 61 5e-159 558
WERAM-Amt-0092 ERN04758 Amborella trichopoda 54 5e-147 518
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 55 6e-147 518
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 49 1e-131 466
WERAM-Sei-0021 Si005834m Setaria italica 49 1e-129 460
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 49 3e-129 459
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 48 3e-124 442
WERAM-Lep-0060 LPERR06G00100.1 Leersia perrieri 50 5e-124 442
WERAM-Orr-0058 ORUFI06G00030.1 Oryza rufipogon 50 8e-122 434
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 50 8e-122 434
WERAM-Orb-0057 OBART06G00020.1 Oryza barthii 50 1e-121 434
WERAM-Orni-0054 ONIVA06G00030.1 Oryza nivara 50 2e-121 433
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 50 2e-121 433
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 50 2e-121 433
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 50 3e-121 432
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 48 1e-120 430
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 49 8e-119 424
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 48 1e-114 410
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 46 3e-113 406
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 49 2e-105 380
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 42 8e-103 371
WERAM-Php-0109 PP1S50_31V6.1 Physcomitrella patens 39 8e-100 361
WERAM-Orl-0104 KN541339.1_FGP001 Oryza longistaminata 48 1e-99 360
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 28 1e-39 161
WERAM-Aet-0069 EMT23788 Aegilops tauschii 27 2e-36 150
WERAM-Anp-0142 ENSAPLP00000015426.1 Anas platyrhynchos 26 6e-11 66.2
WERAM-Orn-0112 ENSONIP00000011684.1 Oreochromis niloticus 28 7e-10 62.8
WERAM-Xet-0118 ENSXETP00000041129.3 Xenopus tropicalis 28 9e-10 62.4
WERAM-Fia-0067 ENSFALP00000004982.1 Ficedula albicollis 27 1e-09 62.4
WERAM-Tag-0164 ENSTGUP00000013727.1 Taeniopygia guttata 27 1e-09 62.4
WERAM-Meg-0141 ENSMGAP00000014906.2 Meleagris gallopavo 27 1e-09 62.0
WERAM-Dar-0151 ENSDARP00000014790.7 Danio rerio 27 1e-09 62.0
WERAM-Gaga-0128 ENSGALP00000023294.4 Gallus gallus 27 1e-09 62.0
WERAM-Xim-0007 ENSXMAP00000001083.1 Xiphophorus maculatus 28 2e-09 61.2
WERAM-Pof-0104 ENSPFOP00000009594.2 Poecilia formosa 28 2e-09 61.2
WERAM-Ten-0096 ENSTNIP00000006980.1 Tetraodon nigroviridis 25 2e-09 61.2
WERAM-Tar-0001 ENSTRUP00000000282.1 Takifugu rubripes 26 3e-09 60.5
WERAM-Orla-0061 ENSORLP00000007931.1 Oryzias latipes 27 3e-09 60.5
WERAM-Anc-0062 ENSACAP00000006236.3 Anolis carolinensis 25 6e-09 59.7
WERAM-Ect-0045 ENSETEP00000004800.1 Echinops telfairi 28 6e-09 59.7
WERAM-Leo-0071 ENSLOCP00000009062.1 Lepisosteus oculatus 26 1e-08 58.5
Created Date 25-Jun-2016