WERAM Information

Tag Content
WERAM ID WERAM-Pot-0121
Ensembl Protein ID POPTR_0011s01440.1
Gene Name POPTR_0011s01440g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0011s01440 POPTR_0011s01440.1 POPTR_0011s01440.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 9.30e-53 180.2 787 1034
Organism Populus trichocarpa
Domain Profile
  HDM JHDM2
           JHDM2.txt   6 dgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy...vgilkkkwaeedlkellksieeeeldevtrkrv 93 
                          g lN+a+k+p   ++pdlgPk+y AyG  +e +r++++t+lh+d+sdavnil++   v   ++++   +l ++ +  ++e  +++ + +v
  POPTR_0011s01440.1 787 AGILNVAVKFPADHLQPDLGPKTYIAYGTREELGRGDSVTKLHCDMSDAVNILTHtaeVALSQEQCSAIELLKMKHRAQDE-KEYLEQDKV 876
                         588****************************************************76644444445555544444444444.444555555 PP
           JHDM2.txt  94 qdp 96 
                          +p
  POPTR_0011s01440.1 877 DNP 879
                         555 PP
           JHDM2.txt   98 ekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvq 182 
                          +  +alW+if+++d++k++e+l+k+++e+++    +v+ +++pihdq +yl+ +++++L+ee+Gve+wt+ Q  g+av+ipag+pHqv+
  POPTR_0011s01440.1  938 TGGAALWDIFRREDVPKLEEYLRKHHREFRHnycaPVERVVHPIHDQCFYLTVEHKRKLKEEFGVEAWTFEQRVGEAVFIPAGCPHQVR 1026
                          44579*************************9888889999************************************************* PP
           JHDM2.txt  183 nlkscvkv 190 
                          nl+s ++v
  POPTR_0011s01440.1 1027 NLQSDNSV 1034
                          ***98877 PP
Protein Sequence
(Fasta)		MRRKISCKKV EVIQLSSDSD DDDWSPRRRK KAPNRKLILA AESELSESDE ECSPSERRND 60
LSEKIKPAPE IELSKSDDQW FLGARRKDSS KKTNPAPEIE LSKSDDQWFL GARRKDSSKK 120
TNPAPEIELL KSDDHWCLGT RRKASSNKTK PASEIELMKS DDQQCLGTRS KASSKKITLT 180
PDVGFSGSNG ELPQTRVKTS SKKIKSTSEI ELSNSSDEWS PRARRKTSSK KVKPVTESDF 240
LESNGFPKRQ QNGLKKRSRS SSVGVGFDVD SEEDVLEAIC LVKMRERIRT RISITEMNER 300
SLKEAREKNI DSMNSSFCAS SSSESASSSL SVSVSKHDGY SNGVSAARNV KAKGQEIKLC 360
HQCMKKERRT VVVCKKCERM YCIQCIKQWY PEMTEGQFAE QCPFCCKKCN CNVCLHSSGL 420
IKILKGEKKE AKGIMNITNH EKVRHLHYLI KSLLPFLEQI CDEQTEEVQI EAGIGDFPVD 480
IAENFCYSNE RVYCNYCATS IVDFHRSCRK CAYELCLSCC REIRKGSLSS RAEKSFWYVD 540
RGFDYMHGGD PLPCQYQNPY DHSESLVLPW NASEDGSISC PPQELGGCGD CLLELKRILP 600
LGWVAELKKR AEELLGICDT EQASLTCKCN EAGEGVLRRA AFREGSEDNY LYCPASKDIL 660
EYELFHFQKH WVKGEPVIVR DVLEQTTHLS WEPKVMWRAL CENVDSHISS KMSEVKAIDC 720
LACCEVEINT RQFFKGYTEG RTYHNFWPEM LKLKDWPPSD KFENLLPRHC DEFNSALPFQ 780
EYSDPNAGIL NVAVKFPADH LQPDLGPKTY IAYGTREELG RGDSVTKLHC DMSDAVNILT 840
HTAEVALSQE QCSAIELLKM KHRAQDEKEY LEQDKVDNPH IELDQGNDSL KEEMGVSEIR 900
EPQKPPSEIN EQLENTEDVL RGATLSGLPS EVETMDKTGG AALWDIFRRE DVPKLEEYLR 960
KHHREFRHNY CAPVERVVHP IHDQCFYLTV EHKRKLKEEF GVEAWTFEQR VGEAVFIPAG 1020
CPHQVRNLQS DNSVS 1035
Nucleotide Sequence
(Fasta)		ATGAGAAGGA AGATTTCGTG TAAGAAAGTG GAAGTGATTC AATTGTCATC AGATAGTGAT 60
GATGATGACT GGTCTCCCCG AAGGAGAAAG AAAGCTCCGA ATAGGAAACT TATATTAGCC 120
GCGGAAAGTG AACTTTCAGA GAGTGATGAG GAGTGCTCAC CTTCGGAAAG AAGGAACGAT 180
TTGTCTGAGA AAATTAAGCC AGCCCCGGAG ATTGAATTGT CGAAAAGTGA TGACCAGTGG 240
TTTCTTGGAG CAAGAAGGAA AGATTCATCT AAGAAAACTA ATCCAGCCCC AGAGATTGAA 300
TTGTCGAAAA GTGATGACCA GTGGTTTCTT GGAGCAAGAA GGAAAGATTC ATCTAAGAAA 360
ACTAATCCAG CCCCAGAGAT TGAATTGTTG AAAAGTGATG ATCATTGGTG TCTGGGAACA 420
AGAAGGAAAG CTTCATCTAA TAAAACTAAG CCAGCCTCAG AAATTGAATT AATGAAAAGT 480
GATGATCAAC AGTGTCTAGG AACAAGAAGC AAAGCTTCAT CTAAGAAAAT TACGTTAACC 540
CCAGATGTTG GATTTTCAGG GAGTAATGGT GAGTTGCCTC AAACAAGAGT CAAAACATCA 600
TCTAAGAAAA TTAAGTCAAC TTCAGAAATT GAGTTGTCAA ATAGTAGTGA TGAGTGGTCA 660
CCTCGAGCGA GAAGAAAAAC TTCATCTAAA AAAGTGAAGC CAGTTACGGA ATCTGACTTT 720
TTGGAGAGTA ATGGGTTTCC AAAGAGGCAG CAGAATGGTT TAAAAAAGCG TAGCAGAAGC 780
AGTTCTGTAG GTGTAGGTTT TGATGTTGAC TCGGAAGAGG ATGTGTTGGA AGCAATTTGT 840
CTTGTAAAAA TGAGAGAGCG AATAAGAACT AGGATTTCAA TTACTGAGAT GAACGAGAGG 900
AGTCTGAAGG AGGCCAGAGA AAAAAATATA GATTCTATGA ATTCTTCTTT CTGTGCTTCT 960
TCTTCTTCAG AATCAGCTTC TTCTAGCTTA TCAGTTTCAG TTTCAAAACA TGATGGTTAT 1020
AGCAATGGTG TGTCTGCAGC GAGAAATGTG AAGGCCAAAG GACAAGAAAT CAAACTATGT 1080
CATCAGTGCA TGAAAAAAGA AAGAAGAACT GTTGTTGTTT GTAAGAAATG TGAAAGAATG 1140
TACTGCATAC AGTGCATCAA GCAATGGTAT CCTGAGATGA CAGAAGGTCA ATTTGCGGAA 1200
CAATGCCCAT TTTGTTGTAA AAAATGCAAT TGCAATGTGT GTTTGCACTC GAGTGGATTG 1260
ATTAAGATAT TAAAAGGAGA AAAAAAAGAA GCAAAAGGCA TAATGAATAT CACCAACCAT 1320
GAAAAGGTTC GGCATCTGCA TTATTTGATC AAGTCACTAC TTCCTTTTCT GGAACAAATC 1380
TGTGATGAAC AAACTGAAGA AGTTCAGATT GAGGCTGGTA TTGGAGATTT CCCTGTTGAT 1440
ATAGCTGAGA ACTTTTGCTA TAGCAATGAG CGTGTTTATT GCAACTACTG TGCCACTTCC 1500
ATTGTTGACT TCCATCGCAG CTGTCGAAAA TGTGCTTATG AACTATGCCT CAGTTGTTGT 1560
CGAGAAATTC GAAAGGGAAG CCTTTCAAGT CGTGCTGAAA AAAGTTTTTG GTATGTGGAT 1620
AGAGGCTTTG ATTATATGCA TGGTGGAGAT CCACTGCCTT GTCAATACCA AAATCCTTAT 1680
GACCACAGTG AGTCTCTGGT TCTACCATGG AATGCCAGTG AAGATGGGAG CATTTCTTGC 1740
CCTCCACAAG AATTGGGTGG TTGTGGTGAT TGTTTATTGG AGCTAAAGCG TATCCTTCCA 1800
CTGGGATGGG TTGCAGAGTT GAAAAAAAGG GCAGAAGAAT TATTGGGAAT CTGTGATACT 1860
GAACAGGCAA GTTTGACGTG CAAGTGTAAT GAAGCAGGGG AAGGGGTGTT GAGAAGAGCA 1920
GCTTTTAGGG AAGGATCTGA GGACAATTAC TTGTATTGTC CTGCTTCAAA GGATATTCTT 1980
GAGTATGAAC TTTTTCACTT CCAAAAGCAC TGGGTTAAAG GTGAGCCAGT TATAGTTCGT 2040
GATGTTCTCG AGCAGACAAC TCATTTGAGC TGGGAGCCAA AGGTCATGTG GCGTGCATTA 2100
TGTGAAAATG TGGATTCACA TATTAGTTCA AAAATGTCTG AAGTGAAGGC TATTGATTGT 2160
CTGGCTTGTT GCGAGGTGGA GATCAATACC CGGCAGTTTT TTAAAGGCTA CACGGAAGGG 2220
AGAACATATC ATAACTTTTG GCCTGAAATG CTTAAGCTCA AGGACTGGCC TCCATCAGAT 2280
AAATTCGAAA ATCTTTTGCC ACGCCACTGT GACGAGTTTA ACAGTGCACT GCCATTTCAA 2340
GAATACAGTG ATCCAAATGC TGGAATCCTT AATGTTGCTG TGAAGTTTCC AGCAGATCAC 2400
CTGCAACCAG ATTTGGGTCC AAAAACTTAC ATTGCATATG GTACAAGAGA AGAGCTTGGA 2460
AGAGGGGACT CAGTGACCAA GCTTCACTGT GACATGTCAG ATGCGGTAAA TATTTTGACA 2520
CATACTGCTG AAGTAGCATT AAGTCAAGAA CAGTGCTCCG CCATTGAGCT GTTGAAAATG 2580
AAGCACAGGG CTCAGGATGA GAAGGAATAT TTAGAACAAG ACAAGGTAGA CAATCCTCAC 2640
ATTGAACTTG ATCAGGGAAA TGATAGTTTG AAAGAAGAGA TGGGTGTCTC AGAAATTAGA 2700
GAGCCACAGA AGCCCCCCTC TGAAATTAAT GAACAACTTG AGAACACTGA AGATGTGTTA 2760
AGAGGAGCTA CACTTTCTGG TTTGCCCTCG GAAGTGGAGA CTATGGACAA AACAGGTGGC 2820
GCCGCCTTGT GGGACATTTT CAGAAGGGAG GATGTTCCCA AGTTAGAGGA ATATTTGAGA 2880
AAGCACCACA GAGAATTCAG GCACAATTAC TGTGCCCCTG TAGAACGGGT CGTTCATCCA 2940
ATTCATGACC AATGTTTCTA TTTAACTGTG GAGCATAAAA GGAAACTGAA GGAGGAATTC 3000
GGAGTTGAAG CCTGGACATT TGAACAAAGA GTTGGAGAGG CTGTATTTAT ACCTGCTGGA 3060
TGCCCACACC AAGTAAGGAA TCTACAGTCT GATAATTCTG TGTCATGA 3109
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0081 EOY28779 Theobroma cacao 59 0.0 875
WERAM-Glm-0083 GLYMA07G39310.2 Glycine max 60 0.0 806
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 60 0.0 774
WERAM-Art-0009 AT1G11950.1 Arabidopsis thaliana 56 0.0 758
WERAM-Met-0115 AES92666 Medicago truncatula 57 0.0 756
WERAM-Bro-0174 Bo9g038630.1 Brassica oleracea 57 0.0 752
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 55 0.0 751
WERAM-Brr-0135 Bra027055.1-P Brassica rapa 56 0.0 748
WERAM-Prp-0037 EMJ15852 Prunus persica 58 0.0 743
WERAM-Arl-0042 fgenesh2_kg.1__ 1301__ AT1G11950.1 Arabidopsis lyrata 55 0.0 742
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 55 0.0 733
WERAM-Lep-0033 LPERR02G31600.1 Leersia perrieri 45 2e-172 604
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 46 3e-166 583
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 43 6e-166 582
WERAM-Ori-0030 BGIOSGA009342-PA Oryza indica 43 3e-165 580
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 47 4e-163 573
WERAM-Orbr-0045 OB03G31290.1 Oryza brachyantha 45 8e-163 572
WERAM-Orgl-0016 OGLUM01G49660.1 Oryza glumaepatula 43 1e-161 568
WERAM-Orm-0031 OMERI02G35990.1 Oryza meridionalis 43 2e-161 567
WERAM-Orb-0029 OBART02G38100.1 Oryza barthii 43 3e-160 563
WERAM-Orni-0028 ONIVA02G41010.1 Oryza nivara 43 8e-160 562
WERAM-Sei-0128 Si034182m Setaria italica 46 2e-158 557
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 46 1e-157 555
WERAM-Mua-0155 GSMUA_AchrUn_randomP11860_001 Musa acuminata 43 5e-154 543
WERAM-Orp-0027 OPUNC02G35390.1 Oryza punctata 42 6e-151 532
WERAM-Orl-0059 KN539156.1_FGP008 Oryza longistaminata 43 1e-150 531
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 43 2e-149 527
WERAM-Tra-0176 Traes_5AL_C9FC195D1.2 Triticum aestivum 42 3e-149 526
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 43 8e-147 519
WERAM-Aet-0048 EMT13865 Aegilops tauschii 48 1e-144 511
WERAM-Amt-0068 ERN16983 Amborella trichopoda 40 1e-139 495
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 50 1e-134 478
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 48 3e-128 457
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 44 2e-123 441
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 30 2e-37 155
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 30 5e-37 154
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 29 5e-37 154
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 29 2e-36 152
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 30 2e-36 152
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 29 4e-36 151
WERAM-Cap-0195 ENSCPOP00000020827.1 Cavia porcellus 29 5e-35 147
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 29 7e-35 147
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 29 7e-35 147
WERAM-Orc-0105 ENSOCUP00000008900.3 Oryctolagus cuniculus 28 9e-35 146
WERAM-Caj-0207 ENSCJAP00000022938.2 Callithrix jacchus 28 1e-34 146
WERAM-Paa-0087 ENSPANP00000002284.1 Papio anubis 28 2e-34 145
WERAM-Hos-0087 ENSP00000323659.5 Homo sapiens 28 2e-34 145
WERAM-Chs-0197 ENSCSAP00000012405.1 Chlorocebus sabaeus 28 2e-34 145
WERAM-Gog-0083 ENSGGOP00000006802.2 Gorilla gorilla 28 2e-34 145
WERAM-Pat-0097 ENSPTRP00000042227.4 Pan troglodytes 28 2e-34 145
WERAM-Otg-0117 ENSOGAP00000010248.2 Otolemur garnettii 28 2e-34 145
WERAM-Poa-0107 ENSPPYP00000013616.2 Pongo abelii 28 2e-34 145
WERAM-Tas-0095 ENSTSYP00000010010.1 Tarsius syrichta 29 2e-34 145
WERAM-Ocp-0022 ENSOPRP00000001989.2 Ochotona princeps 28 2e-34 145
WERAM-Nol-0029 ENSNLEP00000003424.1 Nomascus leucogenys 28 2e-34 145
WERAM-Mum-0192 ENSMUSP00000128789.1 Mus musculus 28 3e-34 145
WERAM-Dan-0108 ENSDNOP00000012864.3 Dasypus novemcinctus 28 4e-34 144
WERAM-Ora-0023 ENSOANP00000003317.1 Ornithorhynchus anatinus 29 4e-34 144
WERAM-Ova-0218 ENSOARP00000022207.1 Ovis aries 28 4e-34 144
WERAM-Ptv-0098 ENSPVAP00000008907.1 Pteropus vampyrus 28 4e-34 144
WERAM-Ran-0048 ENSRNOP00000041218.4 Rattus norvegicus 28 5e-34 144
WERAM-Bot-0126 ENSBTAP00000018069.5 Bos taurus 28 6e-34 144
WERAM-Fec-0111 ENSFCAP00000009754.3 Felis catus 28 9e-34 143
WERAM-Fia-0125 ENSFALP00000010570.1 Ficedula albicollis 28 1e-33 143
WERAM-Mup-0099 ENSMPUP00000009177.1 Mustela putorius furo 28 1e-33 143
WERAM-Prc-0027 ENSPCAP00000002242.1 Procavia capensis 28 1e-33 143
WERAM-Sus-0059 ENSSSCP00000008777.2 Sus scrofa 28 1e-33 143
WERAM-Caf-0086 ENSCAFP00000011182.3 Canis familiaris 28 1e-33 143
WERAM-Gaga-0143 ENSGALP00000036346.1 Gallus gallus 28 1e-33 142
WERAM-Aim-0108 ENSAMEP00000010467.1 Ailuropoda melanoleuca 28 1e-33 142
WERAM-Tut-0121 ENSTTRP00000009851.1 Tursiops truncatus 28 1e-33 142
WERAM-Meg-0127 ENSMGAP00000013877.2 Meleagris gallopavo 28 1e-33 142
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 29 3e-33 141
WERAM-Mam-0113 ENSMMUP00000017247.2 Macaca mulatta 27 4e-33 141
WERAM-Myl-0036 ENSMLUP00000003044.2 Myotis lucifugus 28 5e-33 140
WERAM-Tag-0135 ENSTGUP00000011149.1 Taeniopygia guttata 27 7e-32 137
Created Date 25-Jun-2016