WERAM Information

Tag Content
WERAM ID WERAM-Pot-0062
Ensembl Protein ID POPTR_0005s08460.1
Gene Name POPTR_0005s08460g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0005s08460 POPTR_0005s08460.1 POPTR_0005s08460.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 1.70e-73 247.9 954 1174
Organism Populus trichocarpa
Domain Profile
  HDM JHDM2
           JHDM2.txt    2 Yc.krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy...vgilkkkwae.edlkellksieee.. 83  
                          Y+ +r g+lNLa +lp+n+++pd+gPk+y AyG+  e +r++++t+lh+d+sdavn+l++   v    ++ ae ++lk l  + ++   
  POPTR_0005s08460.1  954 YTdRRSGPLNLAIRLPQNSLKPDMGPKTYIAYGFPIELGRGDSVTKLHCDMSDAVNVLTHtaeVSYNDGQLAEiQNLKLLHFKQDQRel 1042
                          662468******************************************************76633344443330333333333333323 PP
           JHDM2.txt   84 .eldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQkl 167 
                           +  +    ++   k++ ga+W+if+++d++k++e+l+k+ ke+++    + +++++ ihdq++yl+ +++++L+eeyG+e+wt+vQkl
  POPTR_0005s08460.1 1043 fGY-DQNVDKFDVNKNDGGAVWDIFRREDVPKLQEYLDKHFKEFRHihccPLQKVVHSIHDQTFYLTLEHKRKLKEEYGIEPWTFVQKL 1130
                          323.33346677788889***************************9999988899********************************** PP
           JHDM2.txt  168 gdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211 
                          gdav+ipag+pHqv+nlksc+kva dFvsPEnv ec+rlt+e+r
  POPTR_0005s08460.1 1131 GDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECIRLTEEFR 1174
                          ******************************************98 PP
Protein Sequence
(Fasta)		MTRVGKRQRP AKSTAGVKEE AAENGGSEEE VKESGGLVEG SEIEGKVEET CHFDKSKDVS 60
NKGNREWKVK ESESRVSEEE REGNGVEEGR ECDLKENANK GKKKKKGKKK ESDNEKEKEK 120
VKEGNDEKGV SSVVKEKKRV KFAEKEVASV EEGEFGDKSE VRFVKQEERG FAWKEKQEAG 180
TEEEEEIAVD NGKEGKLDGK REEKGKRKRE KKGGKLRNQE VDDEEGKEIG ELGVEGKEKV 240
KFVENEGENS EKGEKKGAEL GNEEETVVGV EENGGPLKKR PRKNEKKVNY AEIDSALDEV 300
VFGEKHRKSQ KEDGVSDSRK KKALLENDGL QREKKSENGD VNNEEKGTAL GNEEVESEEG 360
KETVVGVEEN GGPLKKRLRK TEKKVNYAEI DNALDELVFG EKHRKSRKKV GVSESRQKKG 420
VSECDGLESE KKRENGDVNS GTKRASQKGK KKQEAQEKIK GEEEMEESGE GKGEGDSLVI 480
CTGTGHGPRS QKEQAGQNSK SWRTSQFTEE ACLMCHQCQR SDKGRVIRCL KCKRKRYCIP 540
CLTKWYPKMT EDDIASACPV CLGNCNCKSC LRLDAPVKDL KNLNLEVSEE EEVQHSKFLL 600
CSLLPFLKRL DAEQMTEREI EARIRGVPPA DLQIENASCP ADERMFCDNC RTSIFDYHRS 660
CSNCSSDLCL LCCREIRAGC LQGGGPDVVM EYIDRGFKYM HGEHEEIKDE LLTGSPKKTV 720
SEDFIGPKSG WKANEDGSIH CACGSGNLQL KCLFPNTEVN FSVSVSVSEL VKKVEDVLKN 780
CEIDSANAPV ELRMCFNSNG NRDICNGNEL LKAACREDSD DNYLFNPKAK DIMEDDLKHF 840
QFHWKRAEPV IVSNVLETAS GLSWEPMVMW RAFRQIKHEK HGTLLDVKAI ECLSCCEVEI 900
NVHKFFTGYT EGRFDGKNWP QILKLKDWPP YKTFGESLPR HDVEFTCCLP FKEYTDRRSG 960
PLNLAIRLPQ NSLKPDMGPK TYIAYGFPIE LGRGDSVTKL HCDMSDAVNV LTHTAEVSYN 1020
DGQLAEIQNL KLLHFKQDQR ELFGYDQNVD KFDVNKNDGG AVWDIFRRED VPKLQEYLDK 1080
HFKEFRHIHC CPLQKVVHSI HDQTFYLTLE HKRKLKEEYG IEPWTFVQKL GDAVFIPAGC 1140
PHQVRNLKSC IKVALDFVSP ENVGECIRLT EEFRLLPPNH QAKEDKLEVF VIFLLCLYNN 1200
DKC 1203
Nucleotide Sequence
(Fasta)		ATGACAAGAG TCGGGAAGCG GCAGAGACCG GCGAAATCGA CGGCGGGGGT GAAGGAGGAA 60
GCTGCGGAGA ATGGTGGGTC TGAGGAGGAA GTGAAGGAAA GTGGGGGTTT AGTTGAAGGT 120
AGTGAAATTG AAGGGAAAGT GGAGGAAACT TGTCATTTCG ATAAGTCAAA GGATGTCTCA 180
AATAAGGGGA ATAGGGAGTG GAAGGTAAAG GAGAGTGAGA GTAGAGTTAG TGAAGAAGAA 240
AGGGAAGGTA ATGGTGTGGA GGAAGGGCGA GAATGTGATC TGAAGGAGAA TGCGAATAAG 300
GGTAAAAAGA AAAAGAAGGG AAAGAAGAAA GAAAGTGATA ATGAGAAGGA GAAGGAGAAG 360
GTGAAAGAAG GGAATGATGA AAAGGGGGTC TCATCTGTTG TGAAAGAGAA GAAAAGGGTG 420
AAATTTGCTG AGAAAGAGGT GGCGAGTGTG GAAGAAGGCG AATTTGGTGA TAAAAGTGAA 480
GTGCGGTTTG TGAAGCAGGA AGAGAGAGGG TTTGCTTGGA AGGAAAAACA GGAGGCTGGT 540
ACTGAGGAAG AAGAAGAGAT AGCCGTAGAT AATGGAAAAG AAGGTAAATT AGATGGGAAA 600
AGGGAAGAGA AAGGGAAAAG GAAGAGGGAG AAGAAGGGAG GTAAATTGAG GAATCAGGAG 660
GTGGATGATG AGGAAGGGAA AGAGATTGGA GAGCTGGGAG TTGAAGGGAA GGAAAAAGTG 720
AAATTTGTTG AGAATGAAGG AGAGAACAGT GAAAAGGGTG AGAAGAAGGG AGCTGAATTA 780
GGTAATGAGG AGGAGACTGT TGTCGGCGTG GAAGAGAATG GAGGTCCATT AAAGAAGAGG 840
CCGAGGAAAA ATGAGAAAAA GGTGAATTAT GCTGAGATTG ATAGTGCATT AGATGAGGTA 900
GTGTTTGGGG AGAAACATAG GAAGAGCCAG AAGGAGGATG GAGTCTCGGA TAGTAGAAAG 960
AAGAAAGCAC TCTTGGAGAA TGATGGGCTG CAACGTGAGA AAAAGAGTGA AAATGGTGAT 1020
GTAAACAACG AGGAGAAGGG AACTGCATTG GGTAATGAGG AGGTGGAGAG TGAGGAGGGG 1080
AAGGAGACTG TTGTTGGTGT GGAAGAGAAT GGAGGTCCCT TAAAGAAGAG GCTGAGGAAA 1140
ACTGAGAAAA AGGTGAATTA TGCTGAGATT GATAATGCAT TAGACGAGTT AGTGTTTGGG 1200
GAGAAGCATA GGAAGAGCAG GAAGAAGGTG GGAGTCTCGG AGAGTAGACA GAAGAAAGGG 1260
GTCTCGGAGT GTGATGGATT GGAAAGTGAG AAAAAGAGGG AAAACGGTGA TGTGAATAGT 1320
GGGACAAAGA GAGCGAGTCA AAAAGGGAAG AAGAAGCAGG AGGCGCAGGA GAAAATTAAA 1380
GGAGAAGAAG AAATGGAAGA AAGTGGTGAA GGCAAAGGTG AAGGAGATTC TTTGGTGATT 1440
TGCACTGGGA CAGGTCATGG GCCCAGGAGT CAGAAAGAGC AAGCTGGGCA GAACAGCAAA 1500
TCCTGGCGCA CTAGTCAGTT CACTGAGGAA GCGTGTTTAA TGTGCCACCA ATGCCAGAGA 1560
AGTGATAAAG GCCGTGTCAT TCGATGCCTG AAATGTAAAA GGAAGCGCTA TTGTATCCCC 1620
TGCTTAACAA AATGGTATCC TAAGATGACA GAGGATGATA TTGCAAGTGC TTGTCCAGTT 1680
TGTCTTGGAA ATTGCAACTG TAAATCTTGT TTGCGTCTAG ATGCGCCAGT AAAAGACCTG 1740
AAAAATTTAA ACCTGGAAGT AAGCGAAGAA GAAGAAGTGC AGCACTCTAA GTTTTTACTT 1800
TGTTCACTTC TTCCATTTCT GAAGCGGTTA GATGCAGAGC AAATGACGGA GAGAGAAATT 1860
GAGGCTAGGA TAAGGGGTGT ACCGCCTGCA GACTTACAGA TAGAAAATGC TAGCTGCCCT 1920
GCAGATGAAC GCATGTTCTG TGATAATTGC CGAACTTCTA TTTTTGATTA TCACAGAAGT 1980
TGCTCAAATT GCTCTTCTGA TCTTTGTCTT CTCTGTTGCC GTGAGATCCG TGCTGGATGC 2040
TTGCAAGGTG GTGGGCCGGA TGTGGTTATG GAGTATATTG ATAGGGGATT TAAGTATATG 2100
CATGGTGAAC ATGAGGAAAT AAAAGATGAA TTGCTGACTG GTTCGCCTAA AAAGACTGTC 2160
TCTGAGGATT TTATAGGGCC AAAGTCTGGA TGGAAAGCAA ATGAAGATGG AAGCATTCAT 2220
TGTGCTTGTG GTAGTGGCAA TTTACAACTG AAATGTTTGT TCCCAAACAC AGAAGTTAAT 2280
TTTTCAGTTT CAGTTTCAGT TTCAGAGTTG GTAAAGAAAG TTGAAGATGT GTTAAAAAAC 2340
TGTGAAATTG ACTCTGCTAA TGCTCCCGTT GAACTACGCA TGTGTTTTAA TTCGAATGGC 2400
AATCGTGATA TCTGTAATGG TAACGAGTTG TTAAAAGCAG CATGTCGAGA AGATTCTGAT 2460
GATAACTATT TGTTCAATCC AAAAGCCAAA GATATCATGG AGGATGATTT GAAACATTTT 2520
CAGTTCCATT GGAAGAGAGC TGAGCCTGTG ATTGTTAGCA ATGTGCTTGA GACTGCTTCT 2580
GGGTTAAGTT GGGAGCCGAT GGTAATGTGG CGTGCCTTCC GCCAGATCAA ACATGAAAAA 2640
CATGGTACAC TTTTGGATGT TAAGGCAATT GAGTGCCTGA GTTGCTGTGA GGTAGAAATT 2700
AATGTCCATA AATTCTTTAC TGGTTACACG GAGGGAAGGT TTGATGGTAA AAATTGGCCT 2760
CAGATTCTGA AGCTGAAAGA CTGGCCCCCA TATAAAACAT TTGGTGAAAG TTTGCCACGA 2820
CATGATGTTG AATTCACCTG TTGTTTGCCC TTCAAGGAGT ATACTGACCG CCGCAGTGGA 2880
CCTTTAAACC TTGCTATCAG GTTGCCTCAG AATTCTTTGA AGCCAGACAT GGGGCCGAAG 2940
ACATATATTG CTTATGGATT TCCTATAGAG CTTGGGCGTG GAGATTCTGT TACCAAGCTT 3000
CATTGTGACA TGTCTGATGC GGTGAATGTT TTAACGCATA CTGCTGAGGT ATCCTATAAC 3060
GATGGACAAC TTGCTGAGAT TCAAAATTTG AAGCTTCTTC ACTTCAAACA AGACCAGAGA 3120
GAACTTTTTG GATATGATCA GAATGTGGAT AAATTTGATG TTAACAAGAA TGATGGAGGT 3180
GCTGTTTGGG ATATTTTCCG GAGAGAAGAT GTTCCTAAAT TGCAGGAATA TCTCGATAAG 3240
CACTTCAAAG AATTTAGGCA TATCCATTGT TGCCCTTTAC AAAAGGTTGT TCACTCCATA 3300
CATGACCAGA CATTTTATTT GACTCTAGAG CACAAAAGGA AGCTAAAAGA GGAATATGGC 3360
ATTGAACCGT GGACATTTGT CCAGAAACTT GGAGATGCTG TCTTTATTCC TGCAGGCTGT 3420
CCTCATCAAG TTAGAAACTT GAAGTCTTGC ATTAAGGTAG CACTGGACTT TGTCTCGCCT 3480
GAAAATGTTG GTGAGTGCAT ACGTTTGACA GAGGAATTCC GTCTGCTCCC CCCAAATCAT 3540
CAGGCCAAGG AAGACAAGCT GGAGGTATTT GTAATCTTCC TTTTATGTCT ATATAATAAT 3600
GACAAGTGCT GA 3613
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0088 EOY14163 Theobroma cacao 58 0.0 805
WERAM-Met-0036 AES62955 Medicago truncatula 56 0.0 776
WERAM-Brr-0149 Bra029664.1-P Brassica rapa 55 0.0 733
WERAM-Bro-0103 Bo5g141320.1 Brassica oleracea 55 0.0 730
WERAM-Viv-0065 VIT_10s0042g00830.t01 Vitis vinifera 52 0.0 714
WERAM-Art-0066 AT3G07610.1 Arabidopsis thaliana 51 0.0 693
WERAM-Arl-0040 fgenesh1_pm.C_scaffold_8000499 Arabidopsis lyrata 52 0.0 678
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 47 0.0 641
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 47 0.0 639
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 50 0.0 633
WERAM-Sei-0128 Si034182m Setaria italica 48 3e-180 630
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 50 1e-178 625
WERAM-Prp-0037 EMJ15852 Prunus persica 48 6e-176 616
WERAM-Glm-0246 GLYMA19G14700.2 Glycine max 46 5e-175 613
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 48 6e-168 589
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 48 5e-167 586
WERAM-Tra-0233 Traes_5DL_9DCF29857.2 Triticum aestivum 49 7e-156 549
WERAM-Aet-0048 EMT13865 Aegilops tauschii 49 1e-154 545
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 48 2e-151 534
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 43 2e-150 531
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 49 2e-150 531
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 49 3e-150 530
WERAM-Orm-0040 OMERI03G20080.1 Oryza meridionalis 44 6e-145 513
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 41 1e-143 508
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 45 5e-137 486
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 46 1e-135 482
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 45 2e-135 481
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 49 3e-134 477
WERAM-Mua-0155 GSMUA_AchrUn_randomP11860_001 Musa acuminata 47 4e-134 476
WERAM-Amt-0041 ERN17369 Amborella trichopoda 49 4e-130 463
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 48 5e-130 463
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 47 2e-129 461
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 59 4e-126 450
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 47 1e-121 435
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 40 4e-58 224
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 38 6e-57 220
WERAM-Ora-0091 ENSOANP00000016437.2 Ornithorhynchus anatinus 39 9e-57 219
WERAM-Ptv-0098 ENSPVAP00000008907.1 Pteropus vampyrus 38 1e-56 219
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 39 1e-56 219
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 38 1e-56 219
WERAM-Otg-0117 ENSOGAP00000010248.2 Otolemur garnettii 39 2e-56 219
WERAM-Caj-0207 ENSCJAP00000022938.2 Callithrix jacchus 39 2e-56 219
WERAM-Paa-0087 ENSPANP00000002284.1 Papio anubis 39 2e-56 219
WERAM-Gog-0083 ENSGGOP00000006802.2 Gorilla gorilla 39 2e-56 218
WERAM-Hos-0087 ENSP00000323659.5 Homo sapiens 39 2e-56 218
WERAM-Chs-0197 ENSCSAP00000012405.1 Chlorocebus sabaeus 39 2e-56 218
WERAM-Pat-0097 ENSPTRP00000042227.4 Pan troglodytes 39 3e-56 218
WERAM-Poa-0107 ENSPPYP00000013616.2 Pongo abelii 39 3e-56 218
WERAM-Tas-0095 ENSTSYP00000010010.1 Tarsius syrichta 39 3e-56 218
WERAM-Nol-0029 ENSNLEP00000003424.1 Nomascus leucogenys 39 3e-56 218
WERAM-Sah-0148 ENSSHAP00000015447.1 Sarcophilus harrisii 39 3e-56 218
WERAM-Orc-0105 ENSOCUP00000008900.3 Oryctolagus cuniculus 39 3e-56 218
WERAM-Ocp-0022 ENSOPRP00000001989.2 Ochotona princeps 39 3e-56 218
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 38 3e-56 218
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 38 5e-56 217
WERAM-Dan-0108 ENSDNOP00000012864.3 Dasypus novemcinctus 39 5e-56 217
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 40 6e-56 217
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 38 6e-56 217
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 38 1e-55 216
WERAM-Fec-0111 ENSFCAP00000009754.3 Felis catus 38 1e-55 216
WERAM-Cap-0195 ENSCPOP00000020827.1 Cavia porcellus 38 1e-55 216
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 39 1e-55 216
WERAM-Mup-0099 ENSMPUP00000009177.1 Mustela putorius furo 38 1e-55 216
WERAM-Mum-0192 ENSMUSP00000128789.1 Mus musculus 38 2e-55 216
WERAM-Ova-0218 ENSOARP00000022207.1 Ovis aries 38 2e-55 216
WERAM-Sus-0059 ENSSSCP00000008777.2 Sus scrofa 38 2e-55 215
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 39 2e-55 215
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 37 2e-55 215
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 39 2e-55 215
WERAM-Caf-0086 ENSCAFP00000011182.3 Canis familiaris 38 2e-55 215
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 39 2e-55 215
Created Date 25-Jun-2016