WERAM Information

Tag Content
WERAM ID WERAM-Pot-0052
Ensembl Protein ID POPTR_0004s22720.1
Gene Name POPTR_0004s22720g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0004s22720 POPTR_0004s22720.1 POPTR_0004s22720.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.70e-13 50.3 430 745
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCg...kddegekemvqCdeC 23 
                         ++C  C+   +    +k  v C++C
  POPTR_0004s22720.1 430 NFCWNCRgsiTGAGSRKSKVLCSQC 454
                         6788886343222223338889888 PP
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                         ++C++C +d+ +   +++Cd C+++fH++C++lp  s+p g +wyC+ C 
  POPTR_0004s22720.1 601 DLCQIC-RDGGK---LLCCDVCPRAFHQECLSLP--SIPRG-KWYCKYCL 643
                         58****.55554...9******************..*****.*******6 PP
             PHD.txt   4 ClvCgkddegeke....mvqCdeCddwfHlkCvklp....lsslpegkswyC.psC 50 
                         C++C+ +d+++++    ++ Cd+C++ fH+ C+k      l++lp+g +w+C   C
  POPTR_0004s22720.1 691 CVFCRGHDFERTFgprtVIICDQCEKEFHVGCLKEHkmqdLKELPKG-KWFCcTGC 745
                         ****9888887778888*****************99999999*****.88760455 PP
Protein Sequence
(Fasta)		MANSTDAKDA AMAKVRPGHK REFEFAFRAR SEIRGYLGRT RSSRVFSSPG NNGSNSYNGK 60
KLKGYGIKKV CQLEKAEKVD VVDLEEAKFE SVTPLLSKNG DAGIVEVKEI EEEKEKVVEC 120
EERNNGSLLI LDKDLKEEGD LCEERNNGSV TVLMDGEMEE NEVLGSKSGV EVKEGYKDHP 180
CEEGISGLVL MDEDSNAIVN RAFERKNDCE LKKDDAREEG TSGLSSVLVK NGEGGDVNNS 240
LHPVVVDGDI KCKVEAEKPF RRFTRSALKP KIETVDISSS DGVKVDDRGS SSAAAATTTN 300
TPTKMFSIDG SKKFPTKLKD LLDSGILEGQ KVKYLRGAKV RGPGEKGLHG MVRESGILCF 360
CDDCKGKEVV TPAIFVLHAG SSNKRPPEYI CLENGNTLCD VMNACKNSSL DTLDEAIRLS 420
TGFSPSKKSN FCWNCRGSIT GAGSRKSKVL CSQCFGLKDF QASSAPKTAK KERTAKPHSV 480
PESSCNLLKS SLSGSKSQGR VTKKDIRTHK LVFEEEVLPD GTEVGYYCQG KKLLAGYKKG 540
FGIFCSCCNS EVSPSQFEAH AGWASRRKPY LNIYTSNGVS LHELAISLSK GRRHSIKEND 600
DLCQICRDGG KLLCCDVCPR AFHQECLSLP SIPRGKWYCK YCLNTFEKEK FVERNANAIA 660
AGRVAGVDPI EQITRRCIRI VKTFEAEVGG CVFCRGHDFE RTFGPRTVII CDQCEKEFHV 720
GCLKEHKMQD LKELPKGKWF CCTGCERIHS ALQKLVIRGE EKLPDSSLNF IKKHEESASE 780
SGCSDDVRWR LLSKKTDSSD VTEALLSDAV AIFHECFDPI TVDKSKRRRD DHDFIPSMVK 840
GGNMKGQDLG GMYCAVLLVN HVVVSVAVVR IFGQELAELP IVATSSRWQG QGYFQTLFTC 900
IEKLLGFLNV KNLVLPAAEE VGSIWKNKFG FGAITQDELM EYRRRYQIMV FQGALMLQKP 960
VPKCRIVGKS EGG 973
Nucleotide Sequence
(Fasta)		TTCATTTTTC AGGAAATCAG ATAAAAATAG AAATAAAAGA TGCATTCTTC TTGATGTTAC 60
TGAAATCTTA AGAAACCCAA AAGAGAGTGG CTTTGGTTTT TGATCTCTCA ATCAATATGG 120
CAAACAGTAC GGACGCCAAG GATGCGGCTA TGGCAAAGGT CCGGCCAGGT CACAAACGAG 180
AGTTTGAGTT TGCTTTCAGA GCCCGCTCTG AGATCCGTGG GTATCTGGGC CGGACACGGT 240
CATCTCGGGT CTTCTCGTCT CCAGGTAACA ATGGAAGTAA CAGTTATAAT GGAAAGAAGT 300
TGAAGGGGTA TGGAATTAAA AAGGTTTGTC AGTTAGAGAA AGCTGAAAAG GTTGATGTTG 360
TTGATTTGGA GGAGGCAAAG TTTGAGTCTG TGACTCCTTT GTTGAGCAAG AATGGCGATG 420
CGGGGATTGT GGAAGTGAAG GAAATTGAAG AAGAGAAGGA AAAAGTGGTT GAATGTGAAG 480
AAAGGAATAA CGGGTCGCTG CTGATTCTGG ACAAGGATTT GAAAGAGGAG GGTGATTTGT 540
GTGAGGAAAG GAATAACGGG TCAGTGACAG TTTTGATGGA TGGAGAGATG GAAGAAAATG 600
AGGTTTTAGG AAGCAAGAGT GGTGTTGAAG TAAAGGAGGG TTACAAGGAT CATCCATGTG 660
AGGAAGGGAT TAGTGGGTTA GTTTTGATGG ATGAAGATTC AAATGCGATA GTGAATAGGG 720
CTTTTGAGAG AAAGAATGAT TGTGAATTGA AGAAGGATGA TGCACGCGAG GAAGGGACAA 780
GTGGGCTATC CTCGGTTTTG GTTAAAAATG GTGAGGGAGG AGATGTTAAC AACTCATTGC 840
ATCCAGTTGT AGTTGATGGT GATATTAAAT GTAAGGTTGA AGCGGAAAAA CCTTTTAGGA 900
GGTTTACCAG GTCAGCATTG AAGCCGAAGA TAGAGACTGT GGATATATCT TCCTCTGATG 960
GGGTTAAAGT TGATGACAGA GGCAGTTCAT CTGCTGCTGC TGCTACCACC ACCAACACAC 1020
CTACGAAGAT GTTCAGCATT GATGGGTCAA AGAAGTTTCC AACAAAGTTG AAGGATCTTC 1080
TTGATTCAGG TATACTTGAG GGACAGAAGG TGAAGTATTT GCGCGGTGCC AAGGTAAGAG 1140
GACCTGGAGA GAAAGGGTTG CATGGGATGG TCAGGGAATC GGGAATTTTG TGTTTCTGTG 1200
ATGATTGCAA GGGAAAAGAA GTTGTCACTC CTGCTATTTT TGTGCTGCAT GCGGGCAGTT 1260
CAAACAAGCG TCCACCAGAG TATATTTGCC TGGAGAATGG AAATACACTC TGTGATGTAA 1320
TGAACGCATG CAAGAATTCT TCGTTGGATA CTTTGGATGA AGCTATTCGG CTTTCTACCG 1380
GGTTTTCACC TTCAAAGAAA TCTAATTTCT GTTGGAACTG CAGAGGGTCA ATTACAGGGG 1440
CTGGCTCTAG GAAATCAAAG GTATTGTGTA GTCAATGCTT CGGATTGAAA GATTTTCAAG 1500
CTAGCTCTGC ACCAAAAACA GCTAAAAAAG AACGAACAGC AAAACCACAT TCAGTTCCAG 1560
AGTCCTCTTG CAATTTGTTG AAGTCTAGCC TGTCAGGAAG CAAGAGTCAA GGGAGAGTTA 1620
CAAAAAAAGA TATTCGAACA CATAAGCTGG TTTTTGAAGA AGAGGTCTTG CCAGATGGAA 1680
CTGAAGTTGG ATATTACTGC CAGGGAAAGA AATTGCTGGC AGGCTACAAG AAGGGATTTG 1740
GCATTTTCTG CTCATGCTGC AATTCTGAGG TTAGCCCATC TCAATTTGAA GCTCATGCTG 1800
GTTGGGCATC GCGTCGAAAG CCTTACCTGA ACATTTACAC ATCCAATGGG GTGTCTCTTC 1860
ATGAATTAGC AATATCTCTA TCAAAAGGTC GGAGGCACTC TATCAAGGAG AATGATGACC 1920
TATGCCAGAT CTGTAGAGAT GGTGGGAAAC TTTTGTGTTG TGATGTATGC CCAAGAGCTT 1980
TTCACCAAGA ATGTCTTTCT CTACCTTCAA TTCCTAGGGG TAAATGGTAC TGCAAATATT 2040
GCCTGAATAC TTTTGAGAAA GAAAAATTTG TGGAGCGTAA TGCCAATGCT ATAGCAGCAG 2100
GAAGGGTTGC AGGAGTTGAT CCCATAGAAC AGATAACCAG ACGATGCATT CGTATTGTTA 2160
AAACTTTTGA GGCTGAAGTT GGTGGATGTG TTTTCTGCAG AGGTCATGAT TTTGAAAGAA 2220
CGTTTGGTCC TCGCACTGTG ATTATTTGTG ATCAGTGTGA GAAGGAGTTC CATGTTGGCT 2280
GTTTAAAGGA ACATAAGATG CAAGATCTGA AGGAGTTGCC AAAGGGAAAG TGGTTCTGTT 2340
GCACAGGGTG TGAAAGAATT CATTCTGCTT TGCAGAAATT GGTTATTCGT GGGGAAGAGA 2400
AGCTTCCAGA TTCTTCCCTG AATTTTATAA AGAAGCATGA AGAAAGTGCC TCGGAGAGTG 2460
GTTGCAGTGA TGATGTAAGA TGGAGGCTTC TTAGTAAGAA AACAGATTCT TCTGATGTTA 2520
CTGAAGCCCT ACTGTCCGAC GCTGTCGCCA TTTTCCATGA GTGCTTTGAT CCAATAACTG 2580
TGGATAAATC CAAACGTAGA CGTGATGACC ATGACTTCAT CCCATCCATG GTTAAAGGCG 2640
GGAACATGAA AGGGCAGGAT CTAGGTGGCA TGTATTGTGC TGTATTGCTG GTTAACCATG 2700
TGGTAGTGTC AGTGGCAGTT GTTAGAATTT TTGGCCAGGA ATTGGCTGAG CTGCCTATAG 2760
TTGCAACTAG TAGCAGATGG CAAGGACAGG GTTATTTTCA GACCTTGTTT ACTTGCATTG 2820
AGAAGCTACT TGGATTTCTC AATGTGAAGA ATCTTGTACT TCCTGCAGCT GAAGAAGTCG 2880
GATCTATTTG GAAAAACAAA TTCGGGTTTG GTGCGATAAC TCAAGATGAG CTGATGGAAT 2940
ACAGGAGAAG GTATCAGATA ATGGTGTTTC AAGGGGCATT AATGCTGCAA AAGCCAGTCC 3000
CCAAGTGCCG AATTGTAGGT AAATCAGAGG GCGGCTGAAA GCCAGATACT TTTTAATTGA 3060
AGAAGTGGGA AAGCAATTTT TTGGACAGCA GCCTTTTCCT TTGTGTACAG GAGGATCTTT 3120
AGTAGGCATT TGTGTACAGT AAAACATCCT TTTCATGTTA ATAGTTGGAG CCCACGGGCT 3180
GTTATAATTC TTTTTGTAGA ATTGAAGGGA AAGAAAGGAG GATTTTAGAC GGTTGATTAG 3240
ATATACAAAA GTAGGGAGCA GCGGGGGTGC TCACGCATTA ATCAATTAAG TGTTATTATA 3300
TTAGAATTAT ACTAACAACT TAAAAAAACA GCTGAGGGTC TCGATTTAAC T 3352
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Prp-0026 EMJ08347 Prunus persica 54 0.0 801
WERAM-Viv-0039 VIT_06s0061g00840.t01 Vitis vinifera 56 0.0 779
WERAM-Glm-0174 GLYMA13G39570.1 Glycine max 45 0.0 749
WERAM-Art-0047 AT2G27980.1 Arabidopsis thaliana 51 0.0 743
WERAM-Sol-0136 Solyc11g066480.1.1 Solanum lycopersicum 56 0.0 741
WERAM-Sot-0002 PGSC0003DMT400001219 Solanum tuberosum 56 0.0 734
WERAM-Bro-0081 Bo4g164940.1 Brassica oleracea 51 0.0 727
WERAM-Brr-0168 Bra034381.1-P Brassica rapa 52 0.0 726
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 50 0.0 673
WERAM-Thc-0061 EOY08018 Theobroma cacao 66 0.0 642
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 49 4e-176 616
WERAM-Sei-0021 Si005834m Setaria italica 48 4e-176 616
WERAM-Met-0159 AES81946 Medicago truncatula 62 3e-171 600
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 48 1e-170 598
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 48 1e-170 597
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 46 2e-168 590
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 49 8e-168 588
WERAM-Amt-0092 ERN04758 Amborella trichopoda 57 5e-160 562
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 46 1e-159 561
WERAM-Arl-0074 fgenesh2_kg.4__ 1712__ AT2G36720.1 Arabidopsis lyrata 58 4e-155 546
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 44 2e-152 537
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 45 3e-151 533
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 49 3e-149 526
WERAM-Orr-0058 ORUFI06G00030.1 Oryza rufipogon 42 2e-148 524
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 43 1e-147 521
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 44 4e-147 520
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 43 4e-147 520
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 43 2e-146 517
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 43 2e-146 517
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 41 3e-146 517
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 42 5e-140 496
WERAM-Php-0096 PP1S412_30V6.1 Physcomitrella patens 38 1e-114 412
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 51 8e-106 382
WERAM-Sem-0141 EFJ30219 Selaginella moellendorffii 29 4e-43 174
WERAM-Aet-0069 EMT23788 Aegilops tauschii 29 4e-41 167
WERAM-Ran-0118 ENSRNOP00000052823.4 Rattus norvegicus 30 3e-14 78.6
WERAM-Mum-0216 ENSMUSP00000060054.8 Mus musculus 30 3e-14 78.6
WERAM-Aim-0162 ENSAMEP00000015022.1 Ailuropoda melanoleuca 30 3e-14 78.6
WERAM-Chh-0003 ENSCHOP00000000249.1 Choloepus hoffmanni 30 3e-14 78.2
WERAM-Dan-0007 ENSDNOP00000000870.3 Dasypus novemcinctus 30 4e-14 78.2
WERAM-Tut-0182 ENSTTRP00000015268.1 Tursiops truncatus 30 4e-14 78.2
WERAM-Myl-0158 ENSMLUP00000013056.2 Myotis lucifugus 30 4e-14 78.2
WERAM-Otg-0102 ENSOGAP00000008965.2 Otolemur garnettii 30 4e-14 78.2
WERAM-Cap-0103 ENSCPOP00000007645.2 Cavia porcellus 30 4e-14 78.2
WERAM-Bot-0134 ENSBTAP00000019612.5 Bos taurus 30 4e-14 78.2
WERAM-Fec-0075 ENSFCAP00000006385.3 Felis catus 30 4e-14 78.2
WERAM-Ova-0075 ENSOARP00000007963.1 Ovis aries 30 4e-14 78.2
WERAM-Orc-0077 ENSOCUP00000020108.1 Oryctolagus cuniculus 30 4e-14 78.2
WERAM-Ict-0076 ENSSTOP00000006839.2 Ictidomys tridecemlineatus 30 4e-14 78.2
WERAM-Mup-0195 ENSMPUP00000016754.1 Mustela putorius furo 30 4e-14 78.2
WERAM-Sus-0008 ENSSSCP00000000743.2 Sus scrofa 30 4e-14 78.2
WERAM-Ptv-0138 ENSPVAP00000011854.1 Pteropus vampyrus 30 4e-14 78.2
WERAM-Caf-0156 ENSCAFP00000022067.4 Canis familiaris 30 4e-14 78.2
WERAM-Ect-0045 ENSETEP00000004800.1 Echinops telfairi 29 4e-14 78.2
WERAM-Orn-0112 ENSONIP00000011684.1 Oreochromis niloticus 30 2e-13 76.3
WERAM-Eqc-0182 ENSECAP00000019928.1 Equus caballus 29 4e-13 74.7
Created Date 25-Jun-2016