WERAM Information

Tag Content
WERAM ID WERAM-Pot-0008
Ensembl Protein ID POPTR_0001s23640.1
Gene Name POPTR_0001s23640g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s23640 POPTR_0001s23640.1 POPTR_0001s23640.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 6.30e-09 36.9 302 367
Organism Populus trichocarpa
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt   3 hevsepFrepvdpqleipdYydiikePmdLstikerleegnYss.peefvkDvrlifnNakaynenk 68 
                         h+  + F+   +  +e   Y+d+i+++mdL+ i+++le+g Ys   + f +D+ l+fnNa  + ++ 
  POPTR_0001s23640.1 302 HRNGSLFESLLES-QEMGVYKDMIRQHMDLEAIQAKLEQGSYSLsKLLFFRDLLLLFNNALVFFPKH 367
                         7778899999999.79**************************965999************9998765 PP
Protein Sequence
(Fasta)		MANQEEDIHH QNQQSWGTWE ELLLASAVKR HGFKNWDSVA LELQTKTCLP HLLTTAQICQ 60
QKYLDLNRRF NTTTINNLHH NHTPEEDNQD EEQNNINTDI INNNIVSVPW LEELRKLRVA 120
ELKQEVQRYD VSILTLQLKV KKLEEEREIS VQEGDGNTEK PDLKADRLIN EDEPGKPGSV 180
SGEESDPEDR SVNESNSTAS GGGEDAVAKL EEVEPVQGGS GEPDPVVSGS NRKALDEGGG 240
GGGEESCEFG DSVTQLSCES LNSGRKRKGS ERKEEVSVTG GEETVAVKSE PVVGFLEMIR 300
AHRNGSLFES LLESQEMGVY KDMIRQHMDL EAIQAKLEQG SYSLSKLLFF RDLLLLFNNA 360
LVFFPKHSVE SLTAHKIRSL VMDEMRKDTQ KSDSTVVPEN IPSQPKRELE RSDSLLAKHK 420
SSIPIIVCRK RSSISAKPSS SSLGPKIEQQ QQQSNENKPV NDLKPPAVEQ GLLKMKSEEK 480
PVTGARSTRR GNKNLAKGST SPSKKQNTSP DTKVAAPDKS ETPKTEKKKN EALPLEKKKS 540
AVDFLKRIKK NSPAETPKNN NRGASSGGER KMEGSGGKGE RGKERVLKNS DKKQGKQESS 600
PSKKNVGRPS KKAAEESRVS GKRGRDSGGK EVAKRPRKRS RR 642
Nucleotide Sequence
(Fasta)		TTTTAGAATA GAATCGAAAG AAGGAAAGAA AAGGGTAGGG CAGACCTAAC TCTAACTTAG 60
CTCAGCTCAG CTCCCTCCCC CATCAAAACC AAACCAAACC AATCATGGCT AACCAAGAAG 120
AAGACATTCA CCACCAAAAC CAACAGTCAT GGGGCACGTG GGAAGAGCTG TTGTTAGCAA 180
GTGCCGTCAA GCGTCATGGT TTCAAGAACT GGGATTCCGT TGCTTTAGAA CTTCAAACCA 240
AAACCTGCCT TCCTCATCTC TTAACCACTG CTCAAATTTG CCAGCAGAAA TACCTTGACC 300
TCAACCGCAG ATTCAATACC ACCACCATCA ACAACCTCCA TCACAACCAT ACACCGGAGG 360
AGGATAATCA AGATGAAGAA CAAAACAACA TTAACACTGA TATTATTAAT AATAATATTG 420
TAAGCGTTCC ATGGCTCGAA GAACTTCGTA AACTCCGTGT TGCGGAGTTG AAACAAGAGG 480
TCCAACGATA CGATGTTTCC ATCCTTACTT TGCAATTGAA GGTGAAAAAA TTGGAGGAAG 540
AGCGAGAGAT AAGCGTTCAA GAAGGAGATG GCAATACAGA AAAACCAGAT CTGAAGGCAG 600
ATAGATTGAT AAACGAGGAT GAACCGGGGA AACCGGGTTC GGTTTCAGGT GAGGAGTCGG 660
ACCCGGAGGA CCGGTCGGTG AATGAATCGA ATTCGACTGC CTCGGGTGGG GGAGAAGATG 720
CGGTGGCGAA ATTAGAGGAA GTCGAACCGG TTCAGGGAGG GTCTGGTGAA CCGGACCCGG 780
TTGTGAGCGG GTCGAATCGG AAAGCGCTGG ATGAGGGTGG TGGTGGTGGA GGGGAGGAGT 840
CGTGCGAGTT TGGCGACTCG GTGACTCAGT TGAGTTGTGA GTCGTTGAAT TCGGGAAGGA 900
AGAGGAAAGG GAGCGAGAGA AAGGAGGAGG TTTCAGTAAC AGGCGGTGAG GAAACGGTGG 960
CGGTGAAATC TGAACCGGTG GTTGGGTTTT TAGAGATGAT TAGGGCCCAC AGAAATGGTT 1020
CTCTTTTTGA AAGCCTGCTT GAGAGCCAGG AAATGGGTGT GTATAAAGAC ATGATCCGGC 1080
AGCATATGGA TTTGGAAGCA ATACAAGCAA AGCTAGAACA AGGCTCCTAC TCTCTTTCAA 1140
AACTTTTGTT CTTCCGAGAT CTTTTGCTTC TCTTCAACAA TGCTTTAGTT TTCTTTCCCA 1200
AACACTCTGT CGAATCACTC ACCGCCCACA AAATCCGATC CCTTGTCATG GATGAAATGA 1260
GAAAAGATAC CCAAAAATCT GATTCTACTG TGGTGCCAGA AAATATTCCT TCCCAACCCA 1320
AACGTGAACT TGAAAGATCA GATTCATTGC TCGCTAAACA CAAGTCTTCC ATCCCTATTA 1380
TAGTTTGTCG TAAACGCAGT TCAATATCGG CTAAGCCTTC CTCTTCTAGC CTAGGGCCAA 1440
AGATTGAGCA GCAGCAGCAG CAAAGCAATG AGAACAAACC AGTTAATGAT CTGAAACCGC 1500
CTGCTGTTGA GCAGGGTTTG CTAAAGATGA AATCTGAAGA GAAGCCTGTA ACTGGTGCAA 1560
GAAGTACCAG GAGAGGTAAT AAGAATCTTG CGAAGGGTTC TACTTCTCCG AGCAAGAAGC 1620
AAAATACAAG CCCTGACACA AAAGTTGCTG CACCTGACAA GTCTGAAACT CCTAAAACCG 1680
AAAAGAAGAA AAATGAGGCA TTGCCATTGG AGAAGAAAAA AAGTGCGGTT GATTTCTTGA 1740
AGAGAATAAA GAAGAATTCT CCTGCAGAGA CACCAAAGAA TAATAATAGA GGAGCTAGTA 1800
GTGGTGGAGA GCGAAAAATG GAAGGAAGTG GTGGGAAAGG AGAGAGAGGG AAAGAAAGAG 1860
TGTTGAAGAA TAGTGATAAA AAACAAGGAA AGCAGGAGAG TAGTCCATCA AAGAAGAATG 1920
TTGGGAGGCC ATCGAAGAAG GCAGCAGAGG AGAGTAGGGT TTCAGGAAAG CGTGGCAGGG 1980
ACAGTGGCGG CAAGGAGGTG GCAAAGAGGC CAAGAAAGCG GTCTAGGAGG TAAACACCAC 2040
TCATAAATGG CTGCTATGGC TTCTGTATAT TATGTATGTA GTGTAGAGTA GTGTTTGATC 2100
ACCCAATCAG TTAGCAATTC GTTGATCTTT TAGTCACTGT AACATTGTAT CAGCTCTAAT 2160
TCTTTTTACA CTTGGTAGTT TTGCTACCAT TTCTTCTTTG CTTGTCATTT ACTTCCCCCG 2220
CTACTCGAGT GTAATCGTTA TTTTATTGAG GATCTTACAA GACTTGACCC TTGATTAACT 2280
GATAGGTTTG CTCGTGATTC ATGGGCTAAT GATAATTAGT GAGGGAAATA AGTGTAGTAC 2340
TGTACAAAAC GAAGAATGTT GTGGCAATCA AGCCTTCTGT TTAATTTG 2389
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0058 AT2G44430.1 Arabidopsis thaliana 40 3e-82 303
WERAM-Glm-0090 GLYMA08G15870.1 Glycine max 38 5e-71 266
WERAM-Met-0045 AES66032 Medicago truncatula 37 5e-70 263
WERAM-Bro-0065 Bo4g021680.1 Brassica oleracea 38 3e-69 260
WERAM-Brr-0020 Bra004831.1-P Brassica rapa 39 1e-63 242
WERAM-Thc-0062 EOY09477 Theobroma cacao 36 5e-62 236
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 51 5e-61 233
WERAM-Arl-0135 scaffold_503237.1 Arabidopsis lyrata 35 9e-60 229
WERAM-Prp-0113 EMJ03206 Prunus persica 32 3e-50 197
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 34 4e-49 193
WERAM-Sol-0008 Solyc01g073950.2.1 Solanum lycopersicum 51 4e-42 170
WERAM-Sot-0018 PGSC0003DMT400016153 Solanum tuberosum 41 1e-34 145
WERAM-Brd-0111 BRADI4G33820.1 Brachypodium distachyon 30 2e-30 131
WERAM-Sei-0046 Si013408m Setaria italica 41 2e-25 115
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 39 5e-22 103
WERAM-Ors-0085 OS08T0510700-01 Oryza sativa 38 3e-21 100
WERAM-Orr-0099 ORUFI08G22500.1 Oryza rufipogon 38 3e-21 100
WERAM-Ori-0091 BGIOSGA026697-PA Oryza indica 38 3e-21 100
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 39 4e-21 100
WERAM-Orni-0095 ONIVA08G22660.1 Oryza nivara 41 1e-20 99.0
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 39 1e-20 99.0
WERAM-Hov-0108 MLOC_75616.3 Hordeum vulgare 37 2e-20 98.6
WERAM-Amt-0004 ERN03421 Amborella trichopoda 40 3e-20 97.4
WERAM-Sob-0110 Sb07g027680.1 Sorghum bicolor 42 1e-18 92.4
WERAM-Zem-0018 GRMZM2G022499_P01 Zea mays 38 4e-18 90.9
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 38 1e-15 82.4
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 36 2e-14 78.6
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 36 1e-11 69.7
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 44 2e-06 52.0
Created Date 25-Jun-2016