WERAM Information

Tag Content
WERAM ID WERAM-Sot-0102
Ensembl Protein ID PGSC0003DMT400094462
Gene Name PGSC0003DMG400044033
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400044033 PGSC0003DMT400094462 PGSC0003DMT400094462
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 5.90e-11 43.7 152 219
Organism Solanum tuberosum
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt   3 hevsepFrepvdpqleipdYydiikePmdLstikerleegnYss..peefvkDvrlifnNakaynenks 69 
                           h+++  F+ +    +e  +Y++ ik++mdL+ i+++le++ Ys   ++ f +D+ lifnNa  y++n++
  PGSC0003DMT400094462 152 HKHCCLFETRLPS-QEDLYYFKQIKQHMDLQIIQNKLEQNVYSVleIASFFRDLLLIFNNAIVYYPNET 219
                           6777788888888.7999************************9755789*****************986 PP
Protein Sequence
(Fasta)		MEKVEEDMVL AYSLRRHGLE NWEMVAADFS NSISDRRRCI LQFSSVECQV KYESLKERFK 60
SLYQTDFTEE EDDESGFIKL MADKLTKTYR DYWTEQVKLM DTPLQEKSPN IFKQEAEERI 120
KLNEEKSDDK SNEKMENINQ EFIKILDVVR SHKHCCLFET RLPSQEDLYY FKQIKQHMDL 180
QIIQNKLEQN VYSVLEIASF FRDLLLIFNN AIVYYPNETL QYSVALELRD IIVREMGKKS 240
LFCREIVCGL PAASNPMLAK QKMEKRTYNA RNKAQEGDSS VKRSARVRNK LACEFKNDPD 300
YDCIG 305
Nucleotide Sequence
(Fasta)		ATGGAGAAGG TTGAAGAAGA TATGGTGTTG GCATATTCAC TGCGACGCCA TGGATTAGAA 60
AATTGGGAAA TGGTGGCTGC CGATTTCTCA AATTCCATTT CCGATCGACG TCGATGTATT 120
CTTCAATTTT CGTCTGTGGA ATGTCAGGTC AAGTACGAAA GTTTAAAAGA GCGTTTTAAG 180
AGTCTATATC AAACAGATTT TACTGAAGAA GAAGATGATG AGAGTGGATT CATAAAGTTG 240
ATGGCAGATA AACTTACAAA GACATATAGA GATTATTGGA CAGAGCAAGT CAAACTAATG 300
GATACTCCAC TTCAGGAAAA ATCTCCGAAT ATTTTCAAAC AGGAAGCTGA AGAAAGAATA 360
AAGTTAAATG AGGAAAAAAG TGATGACAAA TCTAATGAAA AAATGGAGAA TATTAATCAA 420
GAGTTCATAA AAATCCTTGA TGTGGTGAGA TCTCACAAGC ATTGTTGTCT TTTTGAAACT 480
CGACTTCCCA GTCAGGAAGA TCTATATTAT TTTAAACAAA TTAAGCAGCA TATGGATTTA 540
CAGATTATTC AAAACAAGTT AGAACAAAAT GTTTATTCGG TCTTGGAAAT CGCCAGCTTC 600
TTTAGAGATC TCTTATTGAT TTTCAACAAC GCCATTGTTT ATTACCCAAA TGAAACTCTT 660
CAGTATTCTG TCGCGCTTGA ACTCAGAGAC ATTATTGTGA GAGAAATGGG TAAGAAATCC 720
TTATTTTGTC GTGAAATTGT GTGTGGATTA CCTGCAGCAA GTAACCCAAT GTTGGCCAAA 780
CAAAAAATGG AGAAAAGAAC ATATAATGCA CGTAACAAAG CTCAAGAAGG TGATTCATCG 840
GTCAAAAGGA GTGCGAGAGT GAGAAATAAG TTGGCTTGCG AATTCAAGAA TGATCCAGAT 900
TATGATTGCA TAGGGTAA 919
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0002 Solyc01g006470.1.1 Solanum lycopersicum 60 2e-93 339
WERAM-Prp-0043 EMJ22101 Prunus persica 43 1e-23 107
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 41 5e-21 99.0
WERAM-Brr-0039 Bra007506.1-P Brassica rapa 37 5e-20 95.9
WERAM-Arl-0077 fgenesh2_kg.4__ 2627__ AT2G44430.1 Arabidopsis lyrata 45 1e-19 94.4
WERAM-Art-0058 AT2G44430.1 Arabidopsis thaliana 36 2e-19 94.0
WERAM-Bro-0065 Bo4g021680.1 Brassica oleracea 43 2e-19 93.6
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 37 2e-18 90.1
WERAM-Thc-0062 EOY09477 Theobroma cacao 40 3e-18 89.7
WERAM-Glm-0202 GLYMA15G42440.2 Glycine max 38 3e-17 86.3
WERAM-Sob-0110 Sb07g027680.1 Sorghum bicolor 38 7e-17 85.5
WERAM-Tru-0078 TRIUR3_28812-P1 Triticum urartu 33 5e-14 75.9
WERAM-Sei-0046 Si013408m Setaria italica 37 6e-14 75.5
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 37 2e-13 73.9
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 34 2e-13 73.6
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 32 3e-13 73.6
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 29 4e-13 72.8
WERAM-Pot-0008 POPTR_0001s23640.1 Populus trichocarpa 44 1e-12 71.2
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 29 2e-12 70.1
WERAM-Orni-0095 ONIVA08G22660.1 Oryza nivara 28 3e-12 69.7
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 28 5e-12 69.3
WERAM-Aet-0108 EMT21081 Aegilops tauschii 30 5e-12 69.3
WERAM-Ors-0085 OS08T0510700-01 Oryza sativa 28 7e-12 68.6
WERAM-Orr-0099 ORUFI08G22500.1 Oryza rufipogon 28 7e-12 68.6
WERAM-Ori-0091 BGIOSGA026697-PA Oryza indica 28 7e-12 68.6
WERAM-Met-0038 AES63730 Medicago truncatula 35 1e-11 68.2
WERAM-Zem-0018 GRMZM2G022499_P01 Zea mays 31 1e-11 68.2
WERAM-Brd-0083 BRADI3G40060.1 Brachypodium distachyon 30 1e-11 67.8
WERAM-Amt-0030 ERN11592 Amborella trichopoda 36 1e-11 67.8
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 31 1e-09 60.8
WERAM-Tra-0093 Traes_2DS_86FDBD81F.1 Triticum aestivum 25 2e-09 60.5
WERAM-Scp-0043 SPCC1450.02.1:pep Schizosaccharomyces pombe 43 4e-07 52.8
WERAM-Pof-0215 ENSPFOP00000017402.2 Poecilia formosa 26 6e-06 48.9
WERAM-Pem-0008 ENSPMAP00000001026.1 Petromyzon marinus 28 9e-06 48.1
Created Date 25-Jun-2016