WERAM Information

Tag Content
WERAM ID WERAM-Sot-0081
Ensembl Protein ID PGSC0003DMT400067527
Gene Name PGSC0003DMG400026258
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400026258 PGSC0003DMT400067527 PGSC0003DMT400067527
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.00e-08 35.8 233 307
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt   3 iClvCgkddegekemvqCdeCddwf.HlkCvklplsslpegkswyCpsCk 51 
                            C++C  d+ +   +++Cd+C+  + H kC++++  ++p+g swyCp C+
  PGSC0003DMT400067527 233 ACMIC-ADGGN---LMCCDNCSSTYhHNKCLGMQ--EVPNG-SWYCPFCV 275
                           7****.66666...9*******6652689*****..*****.*******8 PP
               PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklp 35 
                           +C +Cg++ ++++++ +C++C++ +H +C +  
  PGSC0003DMT400067527 275 VCKICGDPAYENDYLQKCQQCERKYHRECRQAR 307
                           6****999999998999************9877 PP
Protein Sequence
(Fasta)		MAGRSRKQRS SSSSWSSESS YNMSDLQYRA KLPEKKAKEE FLANPIRGYL TEDDTTHDNS 60
SMGRSRKRNR HSKKEQHVKD ETFSSEDNQD SSVSSKKRNT RGRRKRAGIS RKRKVNGQKQ 120
SRATILTWLI DCGVIQENAE VVVIEEETTK KMGKIKKEGI LCSCCCTVLT VGDFYKHAGG 180
TTSKPYEYIL IAETCSSLLS FMVKAWYLPE ESKFHRFNLI ETSHDASDSY DDACMICADG 240
GNLMCCDNCS STYHHNKCLG MQEVPNGSWY CPFCVCKICG DPAYENDYLQ KCQQCERKYH 300
RECRQAREPV SLDMNETQED TFCDLTCKKI YDKLERCYLG VEHELDKSYK WTLLQNTDDG 360
SGINIEDDYQ RTVCHSKLVV ARRLMEDCFE EIIDRHTKID VVKSLVYNCG SNFNRVNFRG 420
FYTFILENDE EIISAATIRI HGTNLAEMPF IATNKEYRRK GMCKKLMVAI ETTLCSLKVE 480
KLVIPSVSEC IETWIESYGF RLISSPLPKE ITLHNTLMFH DSVRLQKDIR PSASDKQVWT 540
NGRLKSVIHR AVVNKEKQRL SIAYFMNPTS SATIECPQQL IDSVSNPRKY VPFTWGELRY 600
LLLTTRRVRG KAVAINNFLI SS 622
Nucleotide Sequence
(Fasta)		ATGGCAGGAA GATCAAGAAA ACAGAGAAGC AGTTCTAGTT CTTGGAGTTC GGAATCTTCA 60
TACAACATGA GTGACTTGCA ATATCGTGCA AAATTACCTG AGAAAAAGGC TAAAGAAGAG 120
TTTTTGGCTA ACCCCATAAG AGGCTATCTC ACTGAAGATG ACACAACTCA TGATAATTCT 180
TCAATGGGGA GAAGCAGGAA ACGAAATCGC CATTCGAAGA AAGAGCAACA TGTTAAAGAT 240
GAAACATTTT CATCAGAGGA TAATCAAGAT TCTTCTGTTT CAAGTAAGAA GAGAAATACG 300
CGGGGTAGGA GGAAAAGAGC AGGAATAAGT AGAAAAAGGA AAGTAAATGG CCAAAAACAG 360
AGTAGAGCAA CAATACTTAC ATGGCTTATA GATTGTGGTG TAATTCAAGA AAATGCAGAA 420
GTTGTTGTCA TTGAAGAGGA GACAACAAAG AAAATGGGGA AGATTAAGAA GGAAGGCATA 480
CTATGTTCTT GTTGCTGTAC TGTTCTTACA GTTGGAGACT TCTATAAACA TGCTGGAGGA 540
ACAACTAGCA AACCTTATGA GTACATTCTC ATTGCTGAAA CATGTTCTTC ACTCTTGTCT 600
TTCATGGTTA AAGCTTGGTA TTTACCTGAA GAAAGTAAAT TTCATCGATT TAACTTAATT 660
GAAACCAGCC ATGATGCTAG TGACTCGTAC GATGATGCTT GCATGATTTG TGCTGATGGA 720
GGGAACCTGA TGTGTTGTGA CAACTGCAGC TCTACTTACC ATCATAATAA GTGCTTGGGA 780
ATGCAGGAGG TTCCTAATGG TTCGTGGTAT TGCCCATTTT GTGTGTGCAA AATCTGTGGT 840
GATCCTGCTT ATGAAAATGA TTATTTGCAG AAATGTCAAC AATGTGAGAG AAAATATCAC 900
AGGGAGTGCC GTCAAGCCAG AGAACCAGTC AGTTTAGACA TGAATGAGAC CCAAGAAGAC 960
ACATTCTGTG ACCTTACCTG CAAAAAGATT TATGATAAAC TGGAGAGGTG CTATCTTGGT 1020
GTTGAACATG AGCTCGATAA AAGTTACAAA TGGACACTTC TTCAGAACAC AGATGATGGC 1080
TCTGGAATTA ATATAGAAGA CGATTATCAA AGAACTGTGT GTCACTCCAA ACTAGTCGTG 1140
GCACGACGAC TTATGGAAGA TTGTTTCGAG GAAATTATAG ACAGGCATAC TAAAATTGAT 1200
GTCGTCAAAA GTCTGGTCTA CAACTGCGGG TCAAATTTCA ACAGGGTGAA TTTCAGGGGC 1260
TTTTACACAT TTATTTTAGA AAATGATGAA GAGATCATTT CTGCAGCAAC CATAAGGATT 1320
CATGGAACAA ACCTTGCTGA AATGCCCTTT ATCGCGACAA ATAAGGAATA TAGGAGAAAA 1380
GGAATGTGCA AAAAGCTAAT GGTTGCCATT GAAACAACTC TTTGCTCTCT AAAGGTAGAA 1440
AAGCTGGTAA TTCCATCAGT ATCAGAGTGC ATAGAGACCT GGATAGAAAG CTATGGTTTT 1500
CGTCTCATTA GCTCTCCACT ACCAAAAGAG ATAACATTGC ACAATACATT GATGTTCCAT 1560
GATTCAGTGA GATTACAAAA AGACATCCGT CCATCCGCTT CTGATAAGCA AGTTTGGACA 1620
AATGGAAGGT TAAAGAGTGT TATACACAGG GCAGTGGTGA ATAAGGAGAA GCAGAGGCTA 1680
TCAATTGCAT ATTTCATGAA TCCAACAAGC AGTGCAACAA TTGAATGCCC TCAACAGCTT 1740
ATTGATTCAG TTTCTAATCC AAGAAAATAT GTACCTTTTA CGTGGGGTGA ACTGCGGTAC 1800
CTTCTTTTGA CTACCAGGAG GGTCAGGGGC AAAGCTGTTG CCATCAATAA TTTCCTTATT 1860
TCTAGTTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Met-0033 KEH43887 Medicago truncatula 42 2e-96 350
WERAM-Thc-0054 EOY05682 Theobroma cacao 43 6e-95 345
WERAM-Viv-0024 VIT_05s0020g03420.t01 Vitis vinifera 42 2e-92 337
WERAM-Bro-0088 Bo5g005570.1 Brassica oleracea 42 2e-91 333
WERAM-Glm-0120 GLYMA11G00755.1 Glycine max 41 3e-91 333
WERAM-Sol-0114 Solyc09g076010.2.1 Solanum lycopersicum 43 1e-90 331
WERAM-Prp-0110 EMJ25684 Prunus persica 41 5e-90 329
WERAM-Tra-0234 Traes_5DL_9FA4818AF.2 Triticum aestivum 41 2e-89 327
WERAM-Mua-0076 GSMUA_Achr4P21300_001 Musa acuminata 40 2e-88 324
WERAM-Amt-0036 ERN16161 Amborella trichopoda 39 4e-86 316
WERAM-Sob-0017 Sb02g004100.1 Sorghum bicolor 38 1e-85 315
WERAM-Brr-0108 Bra020653.1-P Brassica rapa 41 6e-85 312
WERAM-Sei-0098 Si028686m Setaria italica 40 1e-84 311
WERAM-Orgl-0070 OGLUM07G04140.1 Oryza glumaepatula 38 3e-83 306
WERAM-Orm-0068 OMERI07G03260.1 Oryza meridionalis 40 7e-83 305
WERAM-Orr-0074 ORUFI07G04440.1 Oryza rufipogon 40 7e-83 305
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 38 8e-83 305
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 40 8e-83 305
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 40 9e-83 305
WERAM-Org-0072 ORGLA07G0040300.1 Oryza glaberrima 40 1e-82 305
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 39 3e-82 303
WERAM-Orbr-0080 OB07G13580.1 Oryza brachyantha 38 3e-82 303
WERAM-Aet-0042 EMT29012 Aegilops tauschii 39 4e-82 303
WERAM-Art-0101 AT4G14920.1 Arabidopsis thaliana 38 7e-82 302
WERAM-Tru-0097 TRIUR3_33650-P1 Triticum urartu 39 8e-82 302
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 38 2e-81 300
WERAM-Zem-0025 GRMZM2G038050_P01 Zea mays 38 5e-77 286
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 37 6e-75 279
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 37 1e-71 268
WERAM-Hov-0086 MLOC_65889.1 Hordeum vulgare 37 3e-71 267
WERAM-Orb-0048 OBART04G30730.1 Oryza barthii 36 8e-70 262
WERAM-Arl-0059 fgenesh2_kg.3__ 1623__ AT3G14980.1 Arabidopsis lyrata 36 1e-66 252
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 32 4e-65 246
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 41 5e-65 246
WERAM-Pot-0115 POPTR_0010s09810.1 Populus trichocarpa 38 3e-57 220
WERAM-Cym-0028 CMR472CT Cyanidioschyzon merolae 48 1e-10 66.2
WERAM-Ten-0159 ENSTNIP00000015977.1 Tetraodon nigroviridis 45 4e-10 63.9
WERAM-Pof-0154 ENSPFOP00000012650.2 Poecilia formosa 45 5e-10 63.9
WERAM-Orn-0079 ENSONIP00000008816.1 Oreochromis niloticus 46 5e-10 63.9
WERAM-Tar-0183 ENSTRUP00000038299.1 Takifugu rubripes 45 5e-10 63.9
WERAM-Caj-0001 ENSCJAP00000000208.2 Callithrix jacchus 49 6e-10 63.5
WERAM-Asm-0115 ENSAMXP00000011496.1 Astyanax mexicanus 49 7e-10 63.5
WERAM-Tag-0164 ENSTGUP00000013727.1 Taeniopygia guttata 41 7e-10 63.2
WERAM-Dar-0054 ENSDARP00000127601.1 Danio rerio 49 7e-10 63.2
WERAM-Anp-0127 ENSAPLP00000014113.1 Anas platyrhynchos 41 7e-10 63.2
WERAM-Meg-0141 ENSMGAP00000014906.2 Meleagris gallopavo 41 7e-10 63.2
WERAM-Gaa-0207 ENSGACP00000025482.1 Gasterosteus aculeatus 51 7e-10 63.2
WERAM-Gaga-0128 ENSGALP00000023294.4 Gallus gallus 41 8e-10 63.2
WERAM-Eqc-0182 ENSECAP00000019928.1 Equus caballus 46 9e-10 62.8
WERAM-Pes-0148 ENSPSIP00000017808.1 Pelodiscus sinensis 41 1e-09 62.8
WERAM-Fia-0067 ENSFALP00000004982.1 Ficedula albicollis 41 1e-09 62.8
WERAM-Orla-0068 ENSORLP00000008921.1 Oryzias latipes 45 1e-09 62.8
WERAM-Leo-0141 ENSLOCP00000017225.1 Lepisosteus oculatus 49 1e-09 62.8
Created Date 25-Jun-2016