WERAM Information

Tag Content
WERAM ID WERAM-Sot-0060
Ensembl Protein ID PGSC0003DMT400052107
Gene Name PGSC0003DMG400020226
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400020226 PGSC0003DMT400052107 PGSC0003DMT400052107
PGSC0003DMG400020226 PGSC0003DMT400052108 PGSC0003DMT400052108
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.50e-24 87.3 188 255
Organism Solanum tuberosum
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt   3 hevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenks 69 
                           h+ + +F++pvd   l+ipdY+++ik+PmdL tik+rl +g Yssp+ef++Dvrl f+Na +yn++++
  PGSC0003DMT400052107 188 HHNAGVFNKPVDVVkLNIPDYFTVIKHPMDLGTIKKRLTSGAYSSPLEFLADVRLTFSNALTYNPPGN 255
                           89999***********************************************************9986 PP
Protein Sequence
(Fasta)		MARKDKLRGG GSAGFATNCG SEGSGSSGRF DAGISVSGHS IAPQQRWINI NSSSHDGFAV 60
PIHVILQSKL SPSERKNLVL QLRSDIEQIR LLQKKVEFYR TSVIAVSSSS DIVSCSNAQK 120
GLPLASKKKS TGNPGFGKKS NPLAQKTRGL SREVSGRFKS VKPTSVPSRS NAALMKQCEN 180
LLKKLLSHHN AGVFNKPVDV VKLNIPDYFT VIKHPMDLGT IKKRLTSGAY SSPLEFLADV 240
RLTFSNALTY NPPGNIVNVM ADEMSKFFEL RWKTIEKKLP TNDAELVEEK SGLHEENGTA 300
SKKRRLSPTQ HVVMPELPKS KMTDEEKHKL GGELEASLGD LPDNILEFLK ELSSNGTATG 360
ENGEDGEDAI EIDIDILSDD TLFTLRALLD KFLQEKQKGN ARAEPCEIEL PNGLGLSNSS 420
MHLEGGSYSL F 431
Nucleotide Sequence
(Fasta)		GAGAAACCCG TTTTCTTTAC TTCCCTCACT CTTAACAGAA AGAAACCAAA AAAAAGAAAA 60
GAAATCCATA GCGAGAGAAA AACAAAAAAA GAAAAAGAAA AAGAAAAAAA AACTTATCTG 120
TTTGAAGAAG TGGTGCTTCG AGCTTTCAGC TTCCCCTGTG ATCACAGCGG TTGCCTGTAA 180
TTTCTTCAAA GGTTCGCAAG AATTGCAATT CTTGAAGGTT TGGAGGTCAA ATTGGGTATA 240
AATTCACAAT TCTAGGGTTT GCTGTTTTGA TATTTACGGC TTATTCTTCT TGAATTTTCC 300
TCTGTATTTC GTCGAATCAT TTAGTATTGG TGTAATTGGG CGTTGCCTCC AGGGTCAGGA 360
GCTGATTAAG CGAAGGTCGG AGAAACCCTT CTTTTGCTGA GGCCAAGTAG TACCTATTCT 420
GCAGTCTGGT CGATGGCTAG GAAAGACAAG TTGCGTGGAG GTGGTTCTGC TGGTTTTGCC 480
ACTAATTGTG GATCGGAGGG CTCTGGCAGT TCAGGGAGAT TCGATGCTGG AATTTCCGTT 540
TCAGGACATT CAATTGCTCC TCAGCAGAGA TGGATAAATA TAAATTCTTC TTCACATGAT 600
GGTTTTGCTG TGCCCATCCA TGTTATACTG CAATCCAAGC TGTCACCATC TGAGAGGAAA 660
AACTTGGTTC TGCAGTTGAG ATCTGATATT GAACAAATTA GACTTCTTCA GAAGAAAGTT 720
GAGTTTTATA GGACAAGTGT AATTGCAGTT TCATCTTCTA GTGATATTGT TAGCTGTAGC 780
AATGCACAGA AAGGGCTCCC TTTAGCAAGC AAGAAGAAAT CTACAGGAAA CCCTGGGTTT 840
GGAAAGAAGT CAAACCCTCT TGCTCAGAAG ACACGGGGCC TGAGCAGGGA GGTGTCAGGC 900
AGGTTTAAAT CTGTTAAGCC TACTTCAGTA CCATCCCGTT CAAATGCAGC ATTGATGAAA 960
CAGTGTGAGA ACTTGTTGAA AAAGTTGTTG TCACATCATA ATGCTGGTGT ATTTAATAAA 1020
CCTGTTGACG TAGTTAAGTT GAATATTCCC GACTATTTCA CTGTCATTAA ACACCCAATG 1080
GATTTGGGGA CAATAAAAAA GAGGCTGACT TCAGGTGCTT ACTCGAGTCC ACTGGAGTTT 1140
CTTGCTGATG TGAGACTGAC GTTTTCTAAT GCATTGACCT ACAACCCCCC TGGTAATATT 1200
GTCAATGTCA TGGCTGACGA GATGAGCAAA TTTTTTGAAC TGAGATGGAA AACTATTGAG 1260
AAAAAGCTGC CTACAAACGA TGCTGAATTA GTGGAAGAAA AATCAGGCTT GCATGAAGAA 1320
AATGGAACTG CTTCAAAGAA GAGGAGACTT TCTCCAACGC AGCATGTAGT TATGCCAGAA 1380
CTTCCTAAAT CCAAGATGAC TGATGAAGAG AAACATAAAC TTGGTGGTGA ACTAGAAGCT 1440
TCACTTGGTG ATCTACCCGA CAACATCCTT GAGTTTTTGA AGGAACTGAG TTCAAATGGA 1500
ACAGCAACTG GAGAAAATGG AGAAGATGGA GAAGATGCCA TTGAGATTGA CATTGATATT 1560
CTCTCTGATG ATACTTTGTT CACGTTACGG GCGCTTCTAG ATAAGTTTTT GCAAGAGAAG 1620
CAAAAAGGCA ATGCAAGAGC TGAACCTTGT GAGATAGAGC TGCCAAATGG ATTGGGGCTT 1680
AGTAATTCAT CCATGCACCT AGAAGGAGGT TCTTACTCGC TCTTTTGATT TCATGCACGC 1740
TATTTGTTGT TTGGTGTTAG ATTTCGAACT TCAACGATTT TCCTTCTAAA TACTGGAAAA 1800
TATACAGATA ATAACCATGT TGATGAGGAG GTCGATATTG GTGGAAATGA GCCTCCTGTC 1860
TCCAGTTATC CTTCACTTGA GATCGAAAAA GATACAGATC CCAAAAGAGA TGAACGTATA 1920
AATACAGGGG GTCCCAATGG TAATTCAAAT TGGTTATTGA CTCATCGATA CTTTTCGCTT 1980
TGTTTCTGTT GGACATTCTT GTAGTGCATC CTACTTTTTC AATGATCCGC TTTCTGGTGA 2040
CATATCCTGT TCATATCATA TCTTCCTTGT CTTATCTTCT AGGGCTGGTA AAATGAATTT 2100
TAAAGCCATC AAGTCATCGG ACTATTTTTA CCATCTTGTG GGATGTGCTC TTTTCCCTTT 2160
TAATTTTT 2169
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0038 Solyc02g093880.2.1 Solanum lycopersicum 92 0.0 710
WERAM-Viv-0092 VIT_14s0171g00380.t01 Vitis vinifera 56 1e-110 397
WERAM-Thc-0044 EOY02687 Theobroma cacao 55 2e-104 376
WERAM-Glm-0208 GLYMA16G06710.1 Glycine max 53 9e-96 347
WERAM-Pot-0133 POPTR_0012s09600.1 Populus trichocarpa 47 2e-94 343
WERAM-Prp-0035 EMJ12094 Prunus persica 48 2e-91 333
WERAM-Arl-0087 fgenesh2_kg.5__ 500__ AT3G27260.1 Arabidopsis lyrata 47 4e-86 315
WERAM-Art-0078 AT3G27260.1 Arabidopsis thaliana 47 1e-81 301
WERAM-Met-0065 KEH34972 Medicago truncatula 45 1e-79 294
WERAM-Mua-0113 GSMUA_Achr8P01140_001 Musa acuminata 44 1e-75 281
WERAM-Bro-0129 Bo7g084380.1 Brassica oleracea 45 8e-75 278
WERAM-Amt-0007 ERN06807 Amborella trichopoda 42 3e-71 266
WERAM-Brr-0196 Bra039088.1-P Brassica rapa 41 8e-66 248
WERAM-Aet-0046 EMT14126 Aegilops tauschii 41 2e-64 244
WERAM-Lep-0030 LPERR02G18800.1 Leersia perrieri 41 3e-62 236
WERAM-Tru-0018 TRIUR3_07786-P1 Triticum urartu 40 2e-61 233
WERAM-Sei-0065 Si016501m Setaria italica 39 2e-61 233
WERAM-Tra-0345 TRAES3BF067800230CFD_t1 Triticum aestivum 40 6e-61 232
WERAM-Ori-0018 BGIOSGA006099-PA Oryza indica 39 2e-60 230
WERAM-Ors-0023 OS02T0601800-01 Oryza sativa 39 3e-60 229
WERAM-Org-0025 ORGLA02G0198800.1 Oryza glaberrima 39 3e-60 229
WERAM-Orl-0061 KN539183.1_FGP004 Oryza longistaminata 39 3e-60 229
WERAM-Orb-0025 OBART02G23090.1 Oryza barthii 39 4e-60 229
WERAM-Orm-0027 OMERI02G22640.1 Oryza meridionalis 39 4e-60 229
WERAM-Orni-0024 ONIVA02G26010.1 Oryza nivara 39 4e-60 229
WERAM-Orr-0024 ORUFI02G24500.1 Oryza rufipogon 39 5e-60 229
WERAM-Sob-0073 Sb04g025160.1 Sorghum bicolor 39 5e-60 229
WERAM-Orgl-0026 OGLUM02G23450.1 Oryza glumaepatula 39 7e-60 228
WERAM-Brd-0087 BRADI3G47960.1 Brachypodium distachyon 40 6e-59 225
WERAM-Orp-0024 OPUNC02G21060.1 Oryza punctata 39 8e-59 225
WERAM-Zem-0009 GRMZM2G006707_P01 Zea mays 39 1e-58 224
WERAM-Hov-0096 MLOC_70538.1 Hordeum vulgare 37 2e-57 221
WERAM-Orbr-0029 OB02G30530.1 Oryza brachyantha 39 1e-56 217
WERAM-Sem-0092 EFJ05740 Selaginella moellendorffii 41 9e-37 152
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 37 2e-33 140
WERAM-Gam-0180 ENSGMOP00000017708.1 Gadus morhua 42 7e-23 105
WERAM-Chr-0016 EDP01011 Chlamydomonas reinhardtii 36 1e-22 105
WERAM-Orn-0007 ENSONIP00000000922.1 Oreochromis niloticus 47 1e-22 104
Created Date 25-Jun-2016