WERAM Information

Tag Content
WERAM ID WERAM-Sot-0058
Ensembl Protein ID PGSC0003DMT400051031
Gene Name PGSC0003DMG400019814
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400019814 PGSC0003DMT400051031 PGSC0003DMT400051031
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 6.40e-21 75.7 16 252
Organism Solanum tuberosum
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt  2 ehevsepFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkss 70
                          +++  e+F epvdp  e+ dYy+iikePmd+ t++++l eg+Y ++++f +D  li +Na+ +n+ ++ 
  PGSC0003DMT400051031 16 RRDTYEIFAEPVDP-TEVEDYYEIIKEPMDFGTMRAKLHEGMYHNLQQFERDAFLIPKNAMHFNSSGTV 83
                          678899********.7************************************************98775 PP
             BROMO.txt  41 egnYss.peefvkDvr...lifnNa 61 
                           +g Y++ +  f++D+    +++ Na
  PGSC0003DMT400051031 228 NGSYREsLMTFARDLGptaQMVANA 252
                           6778876999999975333666666 PP
Protein Sequence
(Fasta)		LPEKRILQLI LDVLQRRDTY EIFAEPVDPT EVEDYYEIIK EPMDFGTMRA KLHEGMYHNL 60
QQFERDAFLI PKNAMHFNSS GTVYFRQARA IYDLAKKAFH VLKTNPKNIE VEFPVNRRRS 120
MRRLQNEARD TRHVIPEGAL DVSSKNIGLG PSVPSTYRRS SKERPLLCTK DAAPIDSAFL 180
LGNRHAQRLS SLGAGRCSTY EFFRPSPYHD TSSFLCNQNP DSLILNRNGS YRESLMTFAR 240
DLGPTAQMVA NAKMQGSHPF LLSHTTKGPP TCLGFAAFAH VQNQSNTGVL TSSQKLSSPV 300
QGFCSVLKST SDKIDVSNVA KGDETCKIAG MSSQKGALPR TENSEKKSTS ILCYKRNVHK 360
VTEEAAKKTQ NGSERKENNL GTHIVTNGTS GDTKKPGRRS AKVEENKVLP VVLALEQSHS 420
SLSELKWRNK KSSNFTSRKA RSQSKIAEPN VTGTIPGQTK NNSFRSKHEN KAAICDQNNN 480
FGSSINPTFL ETMSQSSELK LNKTIPVMPF PGILSSRFTF DMPFLKAQLN QMNPVGENDM 540
PQVSRDNMEW SLYGHGSNNK MGRKVNPSVS SLQDRPNGTL QTMPTFIYNN QSSHHSIDTD 600
LALQL 605
Nucleotide Sequence
(Fasta)		TTGCCAGAAA AACGTATACT ACAACTTATT CTCGACGTTC TGCAACGGAG GGACACCTAT 60
GAAATATTTG CAGAACCAGT TGATCCCACT GAGGTGGAAG ATTACTATGA AATCATTAAA 120
GAGCCTATGG ATTTTGGTAC AATGAGGGCT AAGCTTCATG AAGGAATGTA TCACAACCTC 180
CAACAGTTTG AGCGTGATGC ATTTCTGATT CCGAAAAATG CAATGCATTT CAACTCCTCT 240
GGTACTGTCT ACTTCAGACA GGCTCGTGCT ATATATGATC TAGCTAAGAA AGCATTTCAC 300
GTCCTAAAAA CTAATCCCAA AAACATTGAA GTAGAATTTC CGGTGAACAG ACGTAGATCG 360
ATGAGAAGAT TGCAAAATGA GGCCAGGGAT ACAAGACATG TCATACCAGA AGGTGCCCTT 420
GATGTTTCTT CCAAGAATAT TGGACTTGGC CCAAGTGTTC CATCAACATA TAGAAGAAGC 480
AGCAAAGAAA GGCCTTTGTT ATGCACCAAA GATGCTGCTC CGATTGACAG TGCATTCTTA 540
TTAGGTAATA GACATGCTCA AAGGTTGTCT TCTCTTGGTG CTGGTCGTTG TTCTACATAC 600
GAATTTTTCA GGCCTTCGCC TTACCATGAC ACTAGCTCAT TTCTGTGTAA CCAGAACCCC 660
GACTCACTAA TTCTTAACAG GAACGGTAGT TACAGAGAGA GCTTGATGAC ATTTGCCAGA 720
GATTTAGGAC CAACAGCACA AATGGTTGCC AACGCGAAAA TGCAAGGGAG CCATCCATTT 780
CTTCTCTCAC ACACAACTAA AGGTCCTCCA ACGTGCTTAG GATTCGCTGC CTTTGCACAT 840
GTACAAAACC AATCTAATAC TGGAGTTCTA ACCTCATCTC AGAAGCTGTC TAGTCCTGTT 900
CAAGGTTTTT GCTCCGTTCT CAAAAGCACC AGTGATAAGA TCGATGTGAG TAATGTTGCA 960
AAGGGAGATG AGACTTGCAA AATAGCTGGC ATGAGCAGTC AGAAAGGGGC CCTTCCTCGC 1020
ACAGAAAATT CAGAGAAGAA AAGTACATCA ATTTTGTGCT ACAAAAGGAA TGTTCATAAA 1080
GTAACAGAAG AAGCGGCCAA GAAAACTCAA AATGGAAGCG AGAGAAAAGA GAATAACTTG 1140
GGAACTCATA TCGTTACTAA TGGGACATCT GGGGATACGA AGAAACCCGG CAGAAGAAGT 1200
GCGAAGGTTG AAGAAAACAA AGTTCTTCCA GTTGTACTAG CTCTAGAGCA ATCTCATTCA 1260
AGTCTATCTG AGTTGAAGTG GAGAAACAAG AAGAGTTCCA ATTTCACATC ACGTAAGGCA 1320
CGATCACAAA GCAAGATTGC AGAGCCCAAT GTCACTGGGA CAATTCCAGG TCAAACTAAA 1380
AATAACAGCT TTAGATCAAA GCACGAAAAC AAAGCAGCTA TTTGTGATCA AAACAACAAT 1440
TTTGGCAGCA GTATCAACCC AACTTTTCTT GAGACAATGA GCCAATCTTC AGAGTTGAAA 1500
TTGAACAAGA CAATTCCTGT AATGCCATTT CCAGGAATAT TGAGCTCCAG GTTCACTTTT 1560
GATATGCCGT TCTTGAAAGC TCAGCTAAAT CAAATGAATC CAGTAGGGGA AAATGACATG 1620
CCTCAAGTAT CAAGAGATAA CATGGAGTGG TCATTGTATG GTCACGGAAG TAATAATAAG 1680
ATGGGCAGGA AAGTAAATCC ATCGGTGTCG TCTCTGCAAG ACAGACCAAA CGGTACTCTG 1740
CAGACCATGC CGACTTTCAT TTACAATAAT CAATCATCAC ATCATTCAAT AGACACTGAC 1800
TTGGCCCTTC AGCTCTGA 1819
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0110 Solyc09g055660.1.1 Solanum lycopersicum 90 0.0 1125
WERAM-Glm-0214 GLYMA16G34785.1 Glycine max 51 2e-61 234
WERAM-Pot-0156 POPTR_0016s14820.1 Populus trichocarpa 45 1e-60 231
WERAM-Thc-0049 EOY04373 Theobroma cacao 44 4e-59 226
WERAM-Prp-0101 EMJ07659 Prunus persica 34 6e-58 223
WERAM-Viv-0058 VIT_08s0056g00330.t01 Vitis vinifera 74 6e-53 206
WERAM-Met-0170 AET01108 Medicago truncatula 67 3e-46 184
WERAM-Amt-0078 ERN04277 Amborella trichopoda 42 3e-45 181
WERAM-Art-0015 AT1G20670.1 Arabidopsis thaliana 57 2e-33 141
WERAM-Mua-0071 GSMUA_Achr4P11790_001 Musa acuminata 55 2e-33 141
WERAM-Arl-0045 fgenesh2_kg.1__ 2254__ AT1G20670.1 Arabidopsis lyrata 56 8e-33 139
WERAM-Brr-0126 Bra025837.1-P Brassica rapa 58 1e-32 138
WERAM-Orb-0106 OBART09G18790.1 Oryza barthii 54 2e-32 138
WERAM-Orr-0109 ORUFI09G20360.1 Oryza rufipogon 56 2e-32 138
WERAM-Ors-0095 OS09T0550000-01 Oryza sativa 56 2e-32 138
WERAM-Orni-0105 ONIVA09G19920.1 Oryza nivara 56 2e-32 138
WERAM-Orgl-0103 OGLUM09G19290.1 Oryza glumaepatula 56 3e-32 137
WERAM-Org-0099 ORGLA09G0149700.1 Oryza glaberrima 56 3e-32 137
WERAM-Orbr-0112 OB09G25430.1 Oryza brachyantha 56 3e-32 137
WERAM-Sei-0113 Si029325m Setaria italica 57 4e-32 137
WERAM-Sob-0032 Sb02g032020.1 Sorghum bicolor 57 4e-32 137
WERAM-Zem-0107 GRMZM2G312501_P01 Zea mays 56 5e-32 136
WERAM-Orl-0064 KN539310.1_FGP014 Oryza longistaminata 56 5e-32 136
WERAM-Bro-0094 Bo5g030560.1 Brassica oleracea 59 5e-32 136
WERAM-Orp-0099 OPUNC09G17160.1 Oryza punctata 55 1e-31 135
WERAM-Brd-0113 BRADI4G37197.1 Brachypodium distachyon 56 2e-31 135
WERAM-Lep-0103 LPERR09G14620.1 Leersia perrieri 56 2e-31 135
WERAM-Ori-0086 BGIOSGA025787-PA Oryza indica 53 6e-31 133
WERAM-Orm-0072 OMERI07G12350.1 Oryza meridionalis 53 6e-31 133
WERAM-Tra-0157 Traes_4DL_AE09D3F97.1 Triticum aestivum 34 9e-31 132
WERAM-Aet-0070 EMT11052 Aegilops tauschii 56 9e-31 132
WERAM-Php-0049 PP1S214_29V6.1 Physcomitrella patens 49 8e-29 126
WERAM-Tru-0062 TRIUR3_25198-P1 Triticum urartu 53 1e-28 125
WERAM-Hov-0042 MLOC_4085.1 Hordeum vulgare 34 4e-26 117
WERAM-Sem-0087 EFJ10182 Selaginella moellendorffii 45 1e-20 99.0
WERAM-Mae-0048 ENSMEUP00000004688.1 Macropus eugenii 43 2e-19 95.1
WERAM-Mum-0217 ENSMUSP00000004985.9 Mus musculus 42 2e-19 95.1
WERAM-Myl-0031 ENSMLUP00000002199.2 Myotis lucifugus 42 3e-19 94.4
WERAM-Ova-0135 ENSOARP00000014056.1 Ovis aries 42 3e-19 94.4
WERAM-Cap-0116 ENSCPOP00000009174.2 Cavia porcellus 42 3e-19 94.4
WERAM-Caj-0165 ENSCJAP00000029416.2 Callithrix jacchus 42 3e-19 94.4
WERAM-Drm-0049 FBpp0088092 Drosophila melanogaster 45 3e-19 94.0
WERAM-Tas-0080 ENSTSYP00000007958.1 Tarsius syrichta 42 4e-19 94.0
WERAM-Ran-0166 ENSRNOP00000041680.3 Rattus norvegicus 42 4e-19 94.0
WERAM-Mod-0118 ENSMODP00000031361.3 Monodelphis domestica 48 4e-19 94.0
WERAM-Usm-0035 UM05887P0 Ustilago maydis 39 7e-19 93.2
WERAM-Eqc-0025 ENSECAP00000004577.1 Equus caballus 41 2e-18 92.0
WERAM-Vip-0098 ENSVPAP00000009227.1 Vicugna pacos 41 2e-18 91.7
WERAM-Dio-0041 ENSDORP00000004516.1 Dipodomys ordii 41 2e-18 91.7
WERAM-Dan-0074 ENSDNOP00000007515.3 Dasypus novemcinctus 41 2e-18 91.7
WERAM-Sah-0064 ENSSHAP00000007688.1 Sarcophilus harrisii 41 2e-18 91.3
WERAM-Pat-0201 ENSPTRP00000046383.4 Pan troglodytes 41 2e-18 91.3
WERAM-Ict-0068 ENSSTOP00000006036.2 Ictidomys tridecemlineatus 41 2e-18 91.3
WERAM-Fec-0022 ENSFCAP00000001618.3 Felis catus 41 3e-18 91.3
WERAM-Aim-0006 ENSAMEP00000000373.1 Ailuropoda melanoleuca 41 3e-18 91.3
WERAM-Spr-0041 CBQ70925 Sporisorium reilianum 43 3e-18 91.3
WERAM-Caf-0020 ENSCAFP00000001989.4 Canis familiaris 41 3e-18 91.3
WERAM-Paa-0008 ENSPANP00000012515.1 Papio anubis 41 3e-18 91.3
WERAM-Mup-0043 ENSMPUP00000004041.1 Mustela putorius furo 41 3e-18 91.3
WERAM-Hos-0050 ENSP00000350267.6 Homo sapiens 41 3e-18 91.3
WERAM-Chs-0121 ENSCSAP00000006430.1 Chlorocebus sabaeus 41 3e-18 91.3
WERAM-Poa-0149 ENSPPYP00000018502.2 Pongo abelii 41 3e-18 91.3
WERAM-Orc-0083 ENSOCUP00000007454.3 Oryctolagus cuniculus 41 3e-18 91.3
WERAM-Nol-0094 ENSNLEP00000011003.1 Nomascus leucogenys 41 3e-18 91.3
WERAM-Gog-0148 ENSGGOP00000013085.2 Gorilla gorilla 41 3e-18 91.3
WERAM-Tut-0180 ENSTTRP00000015203.1 Tursiops truncatus 41 3e-18 90.9
WERAM-Cym-0004 CMB029CT Cyanidioschyzon merolae 36 4e-18 90.5
WERAM-Pes-0055 ENSPSIP00000007495.1 Pelodiscus sinensis 42 5e-18 90.1
WERAM-Ora-0025 ENSOANP00000003691.2 Ornithorhynchus anatinus 46 6e-18 90.1
WERAM-Otg-0037 ENSOGAP00000002289.2 Otolemur garnettii 40 7e-18 89.7
WERAM-Gaga-0007 ENSGALP00000001121.4 Gallus gallus 41 8e-18 89.7
WERAM-Meg-0003 ENSMGAP00000000252.2 Meleagris gallopavo 41 1e-17 89.0
WERAM-Ten-0080 ENSTNIP00000009563.1 Tetraodon nigroviridis 48 1e-17 89.0
WERAM-Anp-0002 ENSAPLP00000000272.1 Anas platyrhynchos 47 1e-17 89.0
WERAM-Anc-0176 ENSACAP00000016633.3 Anolis carolinensis 47 2e-17 88.6
WERAM-Tar-0011 ENSTRUP00000002345.1 Takifugu rubripes 48 2e-17 88.2
WERAM-Fia-0052 ENSFALP00000003674.1 Ficedula albicollis 46 3e-17 87.8
WERAM-Orla-0122 ENSORLP00000014580.1 Oryzias latipes 47 3e-17 87.4
WERAM-Ocp-0109 ENSOPRP00000010619.2 Ochotona princeps 47 4e-17 87.4
WERAM-Soa-0089 ENSSARP00000008498.1 Sorex araneus 41 6e-17 86.7
WERAM-Tag-0057 ENSTGUP00000003959.1 Taeniopygia guttata 44 8e-17 86.3
WERAM-Ect-0118 ENSETEP00000013907.1 Echinops telfairi 41 9e-17 86.3
WERAM-Tub-0066 ENSTBEP00000008262.1 Tupaia belangeri 41 1e-16 85.9
WERAM-Mam-0004 ENSMMUP00000000744.2 Macaca mulatta 47 1e-16 85.9
WERAM-Mim-0029 ENSMICP00000002767.1 Microcebus murinus 47 1e-16 85.9
WERAM-Lac-0016 ENSLACP00000002326.1 Latimeria chalumnae 42 1e-16 85.9
WERAM-Orn-0121 ENSONIP00000012311.1 Oreochromis niloticus 47 1e-16 85.5
WERAM-Asm-0006 ENSAMXP00000001051.1 Astyanax mexicanus 38 1e-16 85.5
WERAM-Ere-0020 ENSEEUP00000001322.1 Erinaceus europaeus 47 2e-16 85.1
WERAM-Xet-0097 ENSXETP00000031780.3 Xenopus tropicalis 44 2e-16 84.7
WERAM-Leo-0167 ENSLOCP00000019767.1 Lepisosteus oculatus 44 2e-16 84.7
WERAM-Loa-0173 ENSLAFP00000016305.2 Loxodonta africana 40 4e-16 84.0
WERAM-Ptv-0134 ENSPVAP00000011359.1 Pteropus vampyrus 45 5e-16 83.6
WERAM-Pof-0113 ENSPFOP00000009821.1 Poecilia formosa 45 6e-16 83.6
WERAM-Xim-0051 ENSXMAP00000004637.1 Xiphophorus maculatus 45 6e-16 83.6
WERAM-Dar-0107 ENSDARP00000067969.4 Danio rerio 39 1e-15 82.8
WERAM-Bot-0219 ENSBTAP00000055298.1 Bos taurus 44 1e-15 82.4
Created Date 25-Jun-2016