WERAM Information

Tag Content
WERAM ID WERAM-Sot-0046
Ensembl Protein ID PGSC0003DMT400042379
Gene Name PGSC0003DMG400016435
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400016435 PGSC0003DMT400042379 PGSC0003DMT400042379
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 2.10e-72 244.6 1047 1276
Organism Solanum tuberosum
Domain Profile
  HDM JHDM2
             JHDM2.txt    5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkwaeedlkellk 78  
                            r g lNLa+klp  +++pdlgPk+y AyG+++e +r++++t+lh+d+sda+nil++             ++i k+++ ++d +e lk
  PGSC0003DMT400042379 1047 RIGILNLAVKLPAGVIKPDLGPKTYIAYGVTKELGRGDSVTKLHCDMSDAINILTHtaemaitdeqqsaIEIVKQRHRTQDERERLK 1133
                            5689************************************************************************99999888888 PP
             JHDM2.txt   79 sieee.......eldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfe 154 
                              ++e       ++     k   d++++ galW+if+++d++k++e+l k+ ke+++    +v ++ +pihdqs+yl+ +++++L+e
  PGSC0003DMT400042379 1134 CEADEypmkmssDI-RGEEKTSDDSETTGGALWDIFRREDVPKLNEYLLKHAKEFRHtfccPVDQVFHPIHDQSFYLTMEHKRKLKE 1219
                            77777777663322.33456677899999***************************999999999********************** PP
             JHDM2.txt  155 eyGvegwtlvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211 
                            e+G+e+wt+ Q lg+av+ipag+pHqv+nlksc kva dFvsPEn+ ecfrlt e+r
  PGSC0003DMT400042379 1220 EFGIEPWTFEQRLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENIRECFRLTAEFR 1276
                            *******************************************************98 PP
Protein Sequence
(Fasta)		MATLVAKQGP LSSQNQDTPG MRNQSRVFRK RKFILNRDEE ELEKDNAAAS VLNVTELPNK 60
KPKLCSEPGA SRGKRTVSEH ANVAIRKEDA LLSGGSTEKV KTAEKPKRNM VKSHLRTKTV 120
AKEKMTVMES EGSHSRITSK GYHRSAEKKL SSKIWDELVG DDEEEESEEE QEQEQEEDEE 180
YFPGSLTNFQ MPLKETLNNL RNSEKLLRSC TKGKILRSGP MRNKGNDEEK DEPSQCKDRL 240
KLSTATKSVL LRGNSQTKRM PDKVNLEQPP GTSRKKMTHK GDNTMNKVEF GSEEKQGVCK 300
KKPTLPKVGK KMPGTREIQG SENKRRVPAI LNGEQCLGTS NKKKIPQGES TSEDEWKEKP 360
SLSKDGKKKQ GIHEKDAENK RISVRRATAS FKRYGNDYYI GEWEDDTDEY EVFPLSDGHH 420
IPSNTRNQGS DVSPESKPKN SLKNIIKNSG KLPVCSSFPS WAPAKLNGEQ CLGTSSKKKS 480
PREDSTMDKM DENDDDWNMC KEKSNLSKDG KKKQRIYEKN AENKRTSVRR AAASVKRYDH 540
DYHVDEWEDD TEEYEVWHHT PSNTRSQRSE VSHESKPKDS LRDIINNSVT LSACSSLPSS 600
SSSSGSTISR NGIDRSKNVK VNCHQCRRSD RRTVVPCTKC KEKFYCIKCI REWYPELEEE 660
EISEACPYCR GKCNCNWCLH SSGMLKTSRR DLTDREKIKH LQYLIIKLLP FLKEIHQEQI 720
QEIETESSIR GVSSSSVDIK QSLCHNEERV YCNNCSTSIV DLHRSCPDCS FELCISCCQE 780
LREGKFPGNS KKAVVQYPNV GYDYMHGGDA QPESSDDMEI PQDQNKPIAW VANYDGNIMC 840
APVAIGGCGN FVLELKHLLP KNWISTLEAK AERILIQCNF SEMISQPICR MDDPELLHRA 900
ASRVGSDDNY LYFPTAKDAM EDDALLHFRR HWGKGEPVIV QNVLAHTSGL SWEPMVMWRA 960
LCEGTDSKIL TSMSEVKAID CLADCQVPIN TRKFFKGYTE GRRYENLWPE MLKLKDWPPS 1020
DKFENLLPRH CDEFISALPF QEYTDPRIGI LNLAVKLPAG VIKPDLGPKT YIAYGVTKEL 1080
GRGDSVTKLH CDMSDAINIL THTAEMAITD EQQSAIEIVK QRHRTQDERE RLKCEADEYP 1140
MKMSSDIRGE EKTSDDSETT GGALWDIFRR EDVPKLNEYL LKHAKEFRHT FCCPVDQVFH 1200
PIHDQSFYLT MEHKRKLKEE FGIEPWTFEQ RLGEAVFIPA GCPHQVRNLK SCTKVAADFV 1260
SPENIRECFR LTAEFRTLPK GHKAREDKLE IKKMVIHAIN QVVTDLEQLT YIV 1313
Nucleotide Sequence
(Fasta)		ACATGGTTTT GTTGCGCCTT CTTCCTTTTC TCAATTTCTC CGTTTTCCCT TAAATAAAAA 60
AATCGATTTT CTTTCCTTTT CTTCACTCCA TTCATTTTCT TTTTAATTTC AATTCTTGAA 120
ATTCACTGCA TGATGAATTA GAATTATTGG AATTCAATCG GAGCTGTTTC AACTGATCCA 180
TTGATCAGTT GTGTTGGGAG TAGAAGATGG CAACATTAGT TGCGAAACAA GGGCCATTGA 240
GCAGTCAGAA TCAAGACACA CCGGGAATGA GAAACCAGTC TAGGGTGTTT AGGAAGAGAA 300
AGTTTATCCT AAACCGCGAT GAAGAAGAGC TTGAAAAGGA CAATGCAGCA GCATCGGTGC 360
TCAATGTTAC AGAATTACCT AATAAGAAAC CAAAGCTTTG TTCTGAGCCT GGCGCCTCCC 420
GTGGCAAAAG AACTGTGTCA GAGCACGCAA ATGTTGCAAT CAGGAAGGAG GATGCACTTT 480
TATCGGGTGG ATCGACAGAG AAAGTAAAAA CAGCGGAAAA GCCTAAGAGG AACATGGTTA 540
AATCACATCT GAGAACCAAG ACGGTAGCTA AGGAAAAAAT GACTGTAATG GAATCTGAAG 600
GTTCACATAG CAGAATCACA TCCAAGGGGT ATCATCGTTC AGCAGAGAAG AAATTAAGTT 660
CTAAAATTTG GGATGAATTG GTGGGTGATG ATGAAGAAGA GGAGAGTGAA GAGGAACAGG 720
AACAGGAACA GGAAGAGGAT GAAGAGTATT TTCCAGGATC CTTAACAAAC TTTCAGATGC 780
CACTTAAGGA AACATTGAAT AATTTAAGAA ATTCAGAGAA GCTTTTGAGA TCTTGCACCA 840
AGGGAAAAAT TCTTAGAAGT GGACCTATGA GAAATAAAGG GAATGATGAA GAGAAAGATG 900
AGCCTTCCCA GTGCAAGGAC AGGCTCAAAC TATCTACCGC CACAAAAAGC GTTCTTCTGA 960
GAGGAAATTC ACAGACAAAA AGGATGCCTG ATAAAGTAAA TCTAGAACAA CCTCCAGGAA 1020
CTTCAAGAAA GAAGATGACT CATAAAGGAG ATAATACAAT GAACAAGGTG GAATTTGGAA 1080
GTGAAGAAAA GCAGGGTGTG TGCAAGAAAA AACCAACTTT ACCCAAGGTT GGAAAGAAAA 1140
TGCCAGGGAC TCGTGAAATT CAAGGCTCAG AGAATAAAAG GCGGGTGCCT GCTATATTAA 1200
ATGGAGAACA ATGTCTAGGA ACGTCAAACA AGAAGAAGAT TCCTCAAGGA GAGAGTACAA 1260
GTGAAGATGA GTGGAAGGAA AAGCCAAGTT TGTCCAAGGA TGGAAAAAAG AAGCAGGGAA 1320
TTCATGAAAA AGATGCCGAG AATAAAAGGA TATCTGTACG ACGTGCTACT GCATCATTCA 1380
AGAGATACGG TAATGATTAC TATATTGGTG AGTGGGAAGA CGATACTGAT GAGTATGAGG 1440
TTTTCCCTCT AAGTGATGGA CATCATATAC CAAGTAACAC AAGAAACCAG GGAAGTGATG 1500
TTTCACCTGA GTCGAAACCA AAAAATAGTC TGAAAAATAT AATAAAAAAT TCAGGGAAGT 1560
TACCTGTTTG TAGTTCATTT CCTTCCTGGG CACCTGCTAA ATTAAATGGA GAACAATGTC 1620
TAGGAACGTC AAGCAAGAAG AAGAGTCCTC GAGAAGATAG TACAATGGAT AAAATGGATG 1680
AAAATGATGA TGACTGGAAT ATGTGCAAGG AAAAGTCAAA TTTGTCCAAG GATGGAAAAA 1740
AGAAGCAGAG AATTTATGAG AAAAATGCAG AGAATAAAAG GACATCAGTA AGACGTGCTG 1800
CTGCATCAGT CAAGAGATAT GATCATGATT ACCATGTTGA TGAGTGGGAA GATGATACTG 1860
AGGAGTATGA GGTTTGGCAT CATACACCAA GTAACACAAG AAGTCAGAGA AGTGAAGTTT 1920
CACATGAATC AAAACCTAAA GATAGTCTGA GAGATATAAT AAATAATTCA GTGACGTTAT 1980
CTGCTTGTAG TTCATTGCCT TCCTCCTCAT CGTCTTCTGG TTCGACAATT TCGAGAAATG 2040
GAATAGATAG ATCTAAAAAC GTGAAGGTAA ATTGTCATCA ATGTAGAAGA AGTGATAGAA 2100
GAACTGTTGT TCCTTGCACT AAGTGTAAAG AGAAATTTTA CTGTATCAAG TGCATCAGGG 2160
AATGGTATCC GGAATTGGAA GAAGAGGAAA TCTCAGAGGC TTGCCCATAT TGTCGTGGAA 2220
AATGTAACTG CAACTGGTGC TTACACTCAA GTGGCATGCT TAAGACATCA AGAAGGGATC 2280
TCACTGATCG TGAAAAGATC AAGCATTTGC AGTATTTGAT TATCAAGCTC CTTCCCTTTC 2340
TGAAAGAAAT TCATCAGGAA CAAATTCAGG AGATAGAGAC AGAGTCTTCT ATTCGTGGGG 2400
TATCTTCATC TTCAGTTGAT ATTAAACAAT CACTTTGTCA CAATGAGGAG CGCGTTTACT 2460
GTAACAACTG TTCAACTTCA ATAGTCGATC TTCATCGAAG CTGCCCAGAT TGCTCATTTG 2520
AGCTATGTAT AAGTTGCTGC CAAGAGCTTC GGGAAGGAAA GTTTCCAGGA AATAGTAAAA 2580
AAGCAGTTGT CCAATATCCA AATGTAGGTT ATGATTACAT GCACGGTGGA GATGCACAGC 2640
CTGAAAGTTC TGATGATATG GAAATTCCAC AGGACCAGAA CAAACCAATT GCTTGGGTTG 2700
CTAATTATGA TGGTAATATC ATGTGTGCTC CTGTAGCAAT TGGTGGATGT GGAAATTTTG 2760
TATTAGAGCT CAAGCATCTG CTACCGAAAA ACTGGATATC AACCTTGGAG GCAAAAGCAG 2820
AAAGGATTCT GATTCAGTGC AATTTTTCCG AGATGATTTC CCAGCCGATT TGTAGAATGG 2880
ATGACCCTGA ACTGTTACAC AGAGCGGCTT CAAGAGTTGG TTCTGATGAT AACTACTTAT 2940
ATTTCCCTAC TGCAAAGGAT GCAATGGAGG ATGATGCACT TTTACACTTT CGTAGGCACT 3000
GGGGCAAGGG TGAACCAGTG ATTGTACAAA ATGTTCTTGC ACATACTAGT GGTTTAAGCT 3060
GGGAACCAAT GGTTATGTGG CGTGCATTAT GTGAGGGCAC TGATTCAAAG ATCCTTACAA 3120
GTATGTCAGA AGTGAAAGCT ATCGACTGTC TGGCTGATTG TCAGGTTCCG ATCAATACTC 3180
GAAAGTTTTT TAAAGGTTAT ACAGAAGGCA GAAGGTATGA AAATCTTTGG CCTGAAATGC 3240
TCAAACTTAA AGATTGGCCA CCATCTGACA AGTTTGAGAA TCTCTTGCCT CGGCACTGCG 3300
ATGAATTCAT CAGTGCATTA CCATTCCAAG AGTACACAGA TCCAAGGATA GGGATTCTGA 3360
ATCTTGCTGT TAAATTACCG GCTGGAGTCA TAAAACCAGA TTTGGGTCCA AAGACATACA 3420
TCGCGTATGG TGTCACCAAG GAACTTGGGA GAGGGGATTC AGTGACAAAG CTTCACTGTG 3480
ATATGTCAGA TGCGATAAAT ATTTTGACAC ACACAGCAGA GATGGCTATA ACTGATGAGC 3540
AGCAGTCTGC AATTGAAATA GTGAAACAGA GGCATAGAAC TCAAGATGAA AGAGAGCGCC 3600
TCAAATGTGA GGCTGATGAA TATCCTATGA AGATGTCTAG TGATATTAGA GGGGAGGAGA 3660
AAACCTCTGA TGATTCAGAG ACAACTGGAG GTGCCTTGTG GGACATTTTC AGAAGGGAAG 3720
ACGTACCCAA GTTGAATGAG TATCTTTTAA AGCATGCAAA GGAATTTAGG CACACTTTCT 3780
GTTGTCCGGT TGATCAGGTT TTTCATCCAA TCCATGACCA GAGCTTCTAC CTAACTATGG 3840
AGCACAAGAG AAAACTGAAG GAAGAATTCG GGATTGAACC TTGGACATTC GAGCAAAGAC 3900
TTGGAGAGGC AGTTTTCATT CCTGCAGGAT GCCCTCACCA AGTGCGTAAT CTCAAGTCGT 3960
GTACCAAAGT TGCTGCTGAT TTTGTTTCTC CTGAAAACAT TCGAGAATGT TTCCGCCTCA 4020
CAGCTGAGTT CAGGACATTG CCGAAAGGCC ACAAGGCCAG AGAAGACAAA CTAGAGATAA 4080
AGAAGATGGT CATTCATGCA ATCAACCAAG TTGTCACAGA TTTGGAGCAG CTCACATACA 4140
TAGTTTAGAG AAATAGCAGT ACTTTCTTTA GCAGCAGTAG CAGTTAGTAT TTGGTTGTTG 4200
CTATTGTCCT TGGGTGTTCT TTTAGGTGTT AGGCCAAGGA CAATTTTGAT ACATATTTCT 4260
TGCAGCTTAG GCCCTCTTCA CCATTGTTGC CTGTAGAAAA GTAAATGTTA AAAGGAACAT 4320
TCTTTTTTCC TGCAATAAAG GCAGCTTCTC CTATACAAAA ACTCGCAACC TTCGCATTTG 4380
ATTACATAAT GGAATATAAT GTGAAATTTC 4411
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 93 0.0 1462
WERAM-Thc-0081 EOY28779 Theobroma cacao 62 0.0 909
WERAM-Arl-0042 fgenesh2_kg.1__ 1301__ AT1G11950.1 Arabidopsis lyrata 62 0.0 880
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 61 0.0 877
WERAM-Art-0009 AT1G11950.1 Arabidopsis thaliana 61 0.0 875
WERAM-Bro-0174 Bo9g038630.1 Brassica oleracea 61 0.0 874
WERAM-Brr-0135 Bra027055.1-P Brassica rapa 60 0.0 853
WERAM-Glm-0083 GLYMA07G39310.2 Glycine max 58 0.0 843
WERAM-Prp-0037 EMJ15852 Prunus persica 58 0.0 843
WERAM-Met-0115 AES92666 Medicago truncatula 57 0.0 812
WERAM-Pot-0042 POPTR_0004s00770.1 Populus trichocarpa 57 0.0 770
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 49 0.0 686
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 48 0.0 679
WERAM-Sei-0128 Si034182m Setaria italica 49 0.0 668
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 47 3e-179 627
WERAM-Tra-0176 Traes_5AL_C9FC195D1.2 Triticum aestivum 51 3e-179 627
WERAM-Aet-0048 EMT13865 Aegilops tauschii 51 5e-178 622
WERAM-Orl-0059 KN539156.1_FGP008 Oryza longistaminata 53 8e-178 622
WERAM-Orgl-0100 OGLUM09G09380.1 Oryza glumaepatula 53 9e-178 622
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 53 2e-177 620
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 53 3e-177 620
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 51 2e-175 614
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 53 5e-168 589
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 55 2e-166 584
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 54 4e-162 570
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 54 4e-158 556
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 55 1e-157 555
WERAM-Amt-0068 ERN16983 Amborella trichopoda 38 9e-146 515
WERAM-Brd-0109 BRADI4G29617.1 Brachypodium distachyon 57 5e-139 493
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 50 1e-137 489
WERAM-Php-0101 PP1S444_19V6.1 Physcomitrella patens 48 2e-136 484
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 47 1e-135 482
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 60 6e-132 469
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 46 8e-128 456
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 37 3e-64 244
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 37 3e-64 244
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 36 4e-63 241
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 38 9e-63 240
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 37 1e-62 239
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 37 1e-62 239
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 37 1e-62 239
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 37 1e-62 239
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 37 1e-62 239
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 37 1e-62 239
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 37 1e-62 239
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 37 1e-62 239
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 37 1e-62 239
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 37 1e-62 239
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 37 1e-62 239
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 37 1e-62 239
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 37 1e-62 239
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 37 1e-62 239
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 37 1e-62 239
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 37 1e-62 239
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 37 1e-62 239
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 37 2e-62 239
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 37 2e-62 239
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 37 2e-62 239
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 37 2e-62 239
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 37 2e-62 239
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 37 2e-62 239
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 36 2e-62 238
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 36 2e-62 238
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 36 3e-62 238
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 37 3e-62 238
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 38 4e-62 238
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 37 6e-62 237
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 37 8e-62 236
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 36 8e-62 236
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 37 1e-61 236
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 36 1e-61 236
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 36 1e-61 236
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 36 2e-61 236
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 36 2e-61 236
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 36 2e-61 235
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 36 2e-61 235
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 37 2e-61 235
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 37 2e-61 235
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 36 3e-61 235
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 37 3e-61 234
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 36 5e-61 234
Created Date 25-Jun-2016