WERAM Information

Tag Content
WERAM ID WERAM-Sot-0045
Ensembl Protein ID PGSC0003DMT400041247
Gene Name PGSC0003DMG400015969
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400015969 PGSC0003DMT400041247 PGSC0003DMT400041247
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 0.02 16.6 26 275
Organism Solanum tuberosum
Domain Profile
  Me_Reader Tudor
             Tudor.txt  5 GlrVvakwssdG...yfYsgkiVvkghrvesgeeyysiky 41
                          G rV+++  ++G    +Y + iV      + ge+ ++++y
  PGSC0003DMT400041247 26 GMRVEVRSDEEGyqgSWYTAVIV-----DSIGEHKFLVEY 60
                          7788888888888889******7.....446777777776 PP
             Tudor.txt   9 vakwssdGyfYsgki 23 
                           +a ++  + ++ g i
  PGSC0003DMT400041247 101 DAWYN--EGWWVGLI 113
                           55444..66776655 PP
             Tudor.txt   1 nskvGlrVvakwssdG...yfYsgkiVv 25 
                           n+ vG +V+++  ++G    +Y+++iV+
  PGSC0003DMT400041247 181 NFCVGAKVEVRSDEEGyqgSWYPATIVR 208
                           688********999999999******85 PP
             Tudor.txt  12 wssdGyfYsgkiVvkghrv 30 
                           w  dG ++ g++     +v
  PGSC0003DMT400041247 262 WH-DGGWWAGQV----CKV 275
                           88.*********....333 PP
Protein Sequence
(Fasta)		MTLKSKELKI RIKCSGRTSK PKFSKGMRVE VRSDEEGYQG SWYTAVIVDS IGEHKFLVEY 60
LTLRTEDESE PLKEKADVSD IRPCPPVIQR IDRFKMLEEV DAWYNEGWWV GLICKILDGL 120
KYMVYFWTTN EELVFDHFTL RPHQEWIDGK WVIAFMKKSK LQVKSKLNLK RQNGGVASHT 180
NFCVGAKVEV RSDEEGYQGS WYPATIVRPL GNGKYLLQYQ TLETDDETDL LTEEVDAIFI 240
RPSPLVIQQA DQFRPLDEVD AWHDGGWWAG QVCKVLIGSN YTVYFRTANE ILEFQHSDLR 300
PRQNWLDGEW IAAKRNVLLC RVVYHDQGKS
Nucleotide Sequence
(Fasta)		AACTTATCAA AAACACAAAA CTATTGCAAT GCAGAAGAAC ATACCAGAGG TAGAGCTGAA 60
GTCAAGAGGG GTCAAACTCA GGATAATGTG TAGCCGATCT TGGAAGGAAA CATTTAGTGA 120
AGGGATGTCT GTGGAGGTGA AACGTGATAA AGAAGGTTGC TATGGTTCAT GGCATACTGC 180
AGCTATTGTT GAATCTGTTG GCTATGACAA GTTTTTGGTT GAATACCAGA AACTGAAAAC 240
AGTGAACGGG TCTCAATTTC TCAAAGAAGA GGTTGATGCT TCATGCATCA GACCTTGTCC 300
ACCTGAAATA CAATCATTTC ATCAATTTGA ACATCTTGAT AGGGTAGATG CTTGGTTGAA 360
TGATGGATGG TGGGAAGGTC ATATAAAAGA AGTTCTTGGT GGTTTAAAGT ATATAGTTTG 420
TTTGACGACC ACAGAGGAAG AATTGGTGTT TGAGCACTCT ATGCTGAGGC CTCGTCAAGA 480
ATGGGTCAAA GAGAAATGGT TTACTGCCAG AGAGGTATGT TCCTCTAATC TCTTCCACGT 540
ACTTGTTGGC TTTTTGCCTC GAGGCTACAT AACAGTCTTC TTTTTCTTTG TACATCCTCC 600
TCTGTTCCCT CAATTTCTTA AAGTTTGATA AGACAAGAAG TTCATCTGAC ATGACACTGA 660
AGTCAAAGGA GCTGAAAATC AGGATAAAGT GTAGTGGAAG GACATCGAAG CCAAAGTTCA 720
GCAAAGGGAT GAGGGTAGAA GTGAGAAGTG ATGAAGAAGG ATACCAGGGA TCCTGGTACA 780
CTGCAGTAAT TGTTGATTCC ATTGGTGAGC ATAAGTTTTT GGTGGAATAC CTGACACTAA 840
GAACTGAAGA CGAATCTGAG CCCCTTAAAG AAAAGGCAGA TGTTTCTGAC ATTAGGCCCT 900
GTCCCCCTGT AATTCAAAGA ATTGACAGAT TTAAAATGCT TGAAGAAGTT GACGCATGGT 960
ACAATGAGGG ATGGTGGGTT GGTCTTATAT GCAAAATCCT TGACGGCTTA AAGTACATGG 1020
TTTATTTTTG GACAACAAAT GAGGAGCTGG TGTTTGACCA TTTCACTTTG AGACCCCATC 1080
AAGAGTGGAT AGATGGAAAA TGGGTCATTG CTTTCATGAA AAAATCTAAA CTCCAAGTGA 1140
AGTCCAAACT AAACTTAAAG AGACAGAATG GTGGAGTAGC CAGTCATACA AATTTTTGTG 1200
TTGGAGCAAA GGTGGAGGTG AGGAGTGATG AAGAAGGTTA CCAGGGTTCA TGGTACCCTG 1260
CTACGATTGT GAGACCTCTA GGAAATGGGA AGTATTTACT ACAATACCAG ACTCTAGAAA 1320
CTGATGATGA AACTGACCTC CTGACTGAAG AAGTAGATGC TATTTTTATA AGGCCTTCTC 1380
CCCTAGTAAT CCAACAAGCT GATCAATTCA GGCCACTTGA TGAAGTTGAT GCTTGGCATG 1440
ATGGTGGATG GTGGGCTGGT CAAGTGTGCA AAGTCCTCAT AGGTTCAAAT TATACAGTCT 1500
ACTTTCGAAC AGCAAATGAG ATCTTGGAAT TTCAGCATTC TGATTTGAGG CCCCGTCAAA 1560
ACTGGCTAGA TGGAGAATGG ATTGCTGCTA AAAGGAATGT GTTGCTTTGC AGGGTCGTAT 1620
ATCATGATCA GGGCAAATCA TGATGATATT TACAGACTTG AACAAGCTCC TCGAAGATCT 1680
TGCACTTTGC TCGTTCATGA AAACATCAAA TTGTGCAGCG AAACATTCTC AAGTTGCCTG 1740
ACTTGTACAT ATAGTATTAC GTTATCATTT GACATGTACA TGAATAGTAT GATCAGCAAA 1800
CTTGGAAGAG CTAAACTTTC CTCTTGTAAC TATTATGGCT TCTTAAATAT ACAAAGCCTA 1860
TATTTAGTCA AAATCAATTT ACCACATATA AAATCAATTA GCA 1904
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pot-0056 POPTR_0005s01460.1 Populus trichocarpa 39 2e-58 223
WERAM-Bro-0003 Bo01087s020.1 Brassica oleracea 41 8e-58 221
WERAM-Art-0008 AT1G09320.1 Arabidopsis thaliana 39 4e-56 216
WERAM-Arl-0049 fgenesh2_kg.1__ 977__ AT1G09320.1 Arabidopsis lyrata 39 4e-55 212
WERAM-Brr-0095 Bra018567.1-P Brassica rapa 37 3e-53 206
WERAM-Prp-0125 EMJ22805 Prunus persica 41 7e-49 191
WERAM-Thc-0070 EOY11696 Theobroma cacao 54 1e-43 174
WERAM-Amt-0093 ERN04860 Amborella trichopoda 33 4e-10 63.2
WERAM-Sol-0109 Solyc09g031580.2.1 Solanum lycopersicum 34 4e-09 59.3
WERAM-Glm-0016 GLYMA02G39300.2 Glycine max 31 3e-07 53.5
WERAM-Met-0088 KEH34313 Medicago truncatula 28 3e-07 53.5
Created Date 25-Jun-2016