WERAM Information

Tag Content
WERAM ID WERAM-Sot-0039
Ensembl Protein ID PGSC0003DMT400035505
Gene Name PGSC0003DMG400013647
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400013647 PGSC0003DMT400035505 PGSC0003DMT400035505
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 4.60e-57 194.5 727 962
Organism Solanum tuberosum
Domain Profile
  HDM JHDM2
             JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy................................. 60 
                           + g lN+asklp+ +++pdlgPk+y AyG a+e +r++++t+lh+d+sdavn+l++                                 
  PGSC0003DMT400035505 727 LSGILNVASKLPNGILKPDLGPKTYIAYGYAEELGRGDSVTKLHCDMSDAVNVLMHtadvtiakwqlsridelkkkkasdsddkkelhi 815
                           6899**********************************************************************************999 PP
             JHDM2.txt  61 ..........vgilkkkwaeedlkellk...sieee......eldevtrkrvqdpke.kpgalWhifaakdaekirellekvskeqga. 128
                                      g + +k  +e+  ++ +   +++ e      ++ +   +++  p+e + ga+W+if+++d+ k++++l++++ke+++ 
  PGSC0003DMT400035505 816 tdtddhlvlkSGFASSK--QEKASDVFSsdwNVQLEgslssdQVVD-LENKFDGPEEeNGGAVWDIFRRQDVSKLENYLKEHHKEFKHt 901
                           99999998663333333..333333333111444444553313333.35666666651568*************************998 PP
             JHDM2.txt 129 ...evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlks 186
                              +v ++++pihdq++yl+ +++++L+ee+ +e+wt+vQklg+avlipag+pHqv+nlk 
  PGSC0003DMT400035505 902 lgsPVDQVVHPIHDQVFYLTTYHKEKLKEEFDIEPWTFVQKLGEAVLIPAGCPHQVRNLKV 962
                           8888999****************************************************85 PP
Protein Sequence
(Fasta)		MSQRNHGDGD GKQQSSVPPD DLRCKRSDGK QWRCKGFKVE GKSMCEQHLH RVKISSASVK 60
SRDASDSVVK RTERRGEEPE KKRRRRYVAR SDTSDSGEKT DDLSEPEDDK PVRKPRFPGT 120
KIRRKGEGRK EDETVSLGDP RKVVGGEGDK KKYLNNEGFR VKKKRGNEEK GCSNFIKSSE 180
KCARTESSSK GKDRMKGVKM ISQEEEEHGN GERRVSRVVK KGVGCDFKKS RLNGKSIQSD 240
EENDGGNVYD SRRKLSAKSP EPIAKGVENE SLLRRSDRKL PEKKKVKVAL EKQNDNDQND 300
CTNPKDKKNG EVTNKKAAPR RRHFSTDDPY DDCQMCHQCM KSDRKVVRCG KRCGKRYCSP 360
CIERWYPHLS EEAIAEKCPV CRGNCNCKDC LRKNISPKEP KYLGIPQENN EKINCLKYLV 420
DALYPFLKTF IHDQTIEKEM EASIKGLSPT QLTIPKAVLY EDERVYCNNC GTSIADLHRN 480
CTTCSYDLCL TCCQEIREGC FLRDEDKRLP EWRAKETGEI PCPPNERGGC GNNRLELKCL 540
FGVKQVEQIM REVENLVKAN SSASETFSVE KQCTCNTKNR RKAASRSDSD DNYLFCPSSD 600
IQEGHLEHFQ KHWRMGEPVI VSNVLELASG LSWEPMVMWR AFRNIAIKEG LSDLVVTAVD 660
CLDWCEVDIN IRQFFTGYLE GRAHSDSWPE MLKLKDWPPS TEFEKRLPRH GAEFIRALPY 720
KEYTHPLSGI LNVASKLPNG ILKPDLGPKT YIAYGYAEEL GRGDSVTKLH CDMSDAVNVL 780
MHTADVTIAK WQLSRIDELK KKKASDSDDK KELHITDTDD HLVLKSGFAS SKQEKASDVF 840
SSDWNVQLEG SLSSDQVVDL ENKFDGPEEE NGGAVWDIFR RQDVSKLENY LKEHHKEFKH 900
TLGSPVDQVV HPIHDQVFYL TTYHKEKLKE EFDIEPWTFV QKLGEAVLIP AGCPHQVRNL 960
KVQYSFVTFM PYTS 974
Nucleotide Sequence
(Fasta)		ATAAAACAAA TATTGAACCG TTCCCTTTTT TCACTTTTCC CTCTAAAAAA CAAAACTCAT 60
TTTCAACAAA CCTAAAAAAC CACAACGGAG ATCAATGAGT CAGCGGAATC ATGGCGACGG 120
CGACGGCAAG CAACAGTCCT CGGTACCGCC GGATGATCTC CGTTGCAAAA GATCAGATGG 180
TAAGCAATGG AGATGCAAAG GTTTTAAGGT CGAAGGTAAA TCCATGTGTG AGCAGCATTT 240
ACACCGGGTA AAGATATCAT CCGCTAGTGT TAAGTCGCGA GACGCAAGTG ATTCTGTCGT 300
TAAGAGGACG GAAAGGAGAG GGGAGGAACC GGAGAAGAAA CGGCGAAGAA GATACGTTGC 360
GAGGAGCGAC ACGAGTGATT CTGGTGAGAA GACGGATGAT TTAAGTGAAC CAGAAGACGA 420
TAAGCCTGTG AGGAAACCTC GTTTTCCTGG GACGAAAATC AGGAGAAAGG GAGAGGGAAG 480
GAAGGAGGAT GAGACTGTTA GTTTAGGTGA TCCAAGGAAA GTAGTAGGGG GCGAGGGTGA 540
CAAGAAGAAA TATTTGAACA ATGAAGGGTT TCGGGTAAAG AAAAAGCGTG GCAATGAGGA 600
GAAAGGTTGT TCTAATTTTA TCAAATCTTC TGAAAAGTGT GCCAGGACTG AATCTTCTTC 660
GAAGGGGAAG GATAGAATGA AAGGAGTAAA AATGATTTCA CAAGAGGAAG AAGAACATGG 720
GAATGGTGAG AGGAGGGTTA GTAGAGTGGT GAAGAAAGGG GTTGGATGTG ATTTTAAGAA 780
ATCAAGGTTA AATGGGAAGA GTATTCAAAG TGATGAGGAG AATGATGGTG GTAATGTTTA 840
TGATTCAAGG AGGAAACTTT CAGCCAAATC GCCGGAACCT ATTGCAAAAG GTGTTGAAAA 900
TGAGTCTTTA CTTAGGAGAA GCGATAGGAA ATTACCAGAG AAGAAAAAAG TGAAAGTTGC 960
TTTGGAAAAG CAGAATGATA ATGACCAAAA TGATTGCACA AATCCAAAGG ACAAGAAGAA 1020
TGGTGAAGTA ACTAACAAGA AGGCTGCCCC AAGGAGAAGG CATTTCAGTA CAGATGACCC 1080
ATATGATGAT TGCCAGATGT GCCATCAGTG CATGAAAAGT GATCGAAAGG TTGTTAGGTG 1140
TGGAAAAAGA TGCGGTAAAC GCTATTGTAG CCCATGTATT GAAAGATGGT ACCCTCATCT 1200
GTCAGAGGAA GCAATTGCCG AGAAATGCCC CGTTTGTCGT GGGAACTGCA ATTGCAAAGA 1260
TTGTTTACGC AAAAACATTA GTCCTAAGGA ACCAAAATAT TTAGGAATAC CACAGGAAAA 1320
CAACGAAAAA ATTAATTGCT TGAAGTATCT TGTGGATGCA CTTTACCCAT TTTTGAAAAC 1380
ATTTATCCAT GATCAAACCA TTGAAAAGGA GATGGAGGCA TCAATTAAAG GTTTGTCACC 1440
GACACAGTTA ACAATACCAA AAGCTGTCCT TTATGAGGAT GAGCGTGTTT ATTGCAACAA 1500
CTGCGGTACC TCCATTGCTG ATCTTCATAG AAATTGTACA ACTTGTTCTT ATGATCTCTG 1560
TCTGACCTGC TGTCAGGAAA TTCGAGAAGG TTGTTTTCTA AGAGATGAAG ATAAAAGGCT 1620
CCCTGAATGG AGAGCAAAAG AAACGGGTGA AATACCTTGC CCACCAAACG AAAGAGGTGG 1680
CTGTGGAAAT AATCGCCTGG AGCTTAAGTG TCTCTTTGGT GTAAAGCAGG TTGAACAAAT 1740
AATGAGGGAA GTTGAAAACT TAGTCAAAGC AAATTCATCT GCCAGTGAGA CCTTCTCTGT 1800
TGAAAAACAG TGTACCTGTA ACACTAAAAA TAGAAGAAAA GCAGCTTCCA GATCAGATTC 1860
TGATGACAAT TATTTGTTCT GCCCTTCAAG TGACATACAG GAAGGGCACC TGGAACACTT 1920
CCAGAAACAT TGGAGAATGG GAGAACCTGT CATTGTAAGC AACGTTCTTG AATTAGCATC 1980
TGGATTAAGC TGGGAGCCAA TGGTGATGTG GCGTGCGTTC CGTAATATAG CAATCAAGGA 2040
GGGCTTATCA GATTTGGTGG TGACAGCAGT TGATTGTCTT GATTGGTGTG AGGTGGATAT 2100
AAATATTCGT CAATTTTTTA CGGGTTATCT TGAAGGTCGA GCACACTCAG ATTCATGGCC 2160
CGAAATGCTT AAGCTTAAGG ACTGGCCCCC ATCTACAGAA TTTGAGAAGC GGTTGCCACG 2220
CCATGGAGCA GAATTTATTA GAGCCTTGCC GTACAAAGAA TACACACATC CGCTTTCTGG 2280
TATTCTTAAT GTTGCATCCA AACTTCCAAA TGGTATACTG AAGCCAGATC TGGGTCCAAA 2340
AACATATATA GCATATGGAT ATGCTGAAGA ACTTGGACGT GGAGATTCCG TTACAAAGCT 2400
TCATTGTGAT ATGTCTGATG CGGTGAATGT TTTAATGCAT ACTGCTGATG TTACTATTGC 2460
TAAGTGGCAG CTTTCAAGAA TTGATGAGCT GAAGAAAAAG AAAGCTTCTG ATTCAGATGA 2520
TAAAAAAGAA CTACATATTA CTGATACAGA TGATCACCTA GTTCTTAAGA GTGGTTTTGC 2580
ATCTTCAAAA CAAGAAAAAG CAAGTGATGT TTTTTCCTCT GACTGGAATG TGCAATTGGA 2640
GGGCAGTTTA TCTTCTGATC AGGTGGTTGA TCTTGAAAAC AAGTTTGATG GACCAGAGGA 2700
AGAAAATGGT GGTGCAGTCT GGGATATCTT TAGGAGACAG GATGTTTCCA AGCTCGAGAA 2760
TTATCTTAAA GAGCACCACA AGGAATTCAA GCATACACTT GGTTCTCCGG TAGACCAGGT 2820
TGTTCACCCA ATTCATGATC AAGTTTTCTA CTTAACTACG TATCACAAGG AGAAACTCAA 2880
GGAAGAGTTT GACATTGAAC CGTGGACATT TGTGCAAAAA CTTGGAGAAG CAGTTCTCAT 2940
ACCTGCTGGG TGTCCCCATC AAGTTAGAAA TCTGAAGGTA CAATATTCTT TTGTTACTTT 3000
TATGCCATAT ACTTCTTAAT CGTGAACCTA ATTGTAGAAG TTGAGTTCAC GTGTACCATA 3060
TTGCTTGCTT CGCCAGCTGC CCCCAACCTG TTAAAAAAGG TCCAGTCATG CACAAAGAAA 3120
TAGGGGAAAA TAAACCTGAG GCATAAGAAA AGATTGGAAA ATTAATTTTT CTTTTCACTA 3180
TAGGTTGGGT ACGATAGATT TTGCTAGACA ACTATATGGT GTTTATCCCC TCATCTTCAT 3240
GCACGTCCG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0031 Solyc02g082400.2.1 Solanum lycopersicum 87 0.0 1228
WERAM-Viv-0065 VIT_10s0042g00830.t01 Vitis vinifera 50 0.0 666
WERAM-Thc-0088 EOY14163 Theobroma cacao 48 0.0 644
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 46 6e-178 622
WERAM-Met-0036 AES62955 Medicago truncatula 44 1e-172 604
WERAM-Glm-0245 GLYMA19G12090.1 Glycine max 46 9e-172 602
WERAM-Pot-0063 POPTR_0005s09360.1 Populus trichocarpa 49 2e-171 600
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 45 6e-169 592
WERAM-Sei-0128 Si034182m Setaria italica 46 4e-168 589
WERAM-Lep-0033 LPERR02G31600.1 Leersia perrieri 44 8e-168 588
WERAM-Brr-0086 Bra016801.1-P Brassica rapa 47 7e-167 585
WERAM-Bro-0174 Bo9g038630.1 Brassica oleracea 47 1e-166 585
WERAM-Art-0023 AT1G62310.1 Arabidopsis thaliana 47 1e-165 581
WERAM-Arl-0004 Al_scaffold_0002_290 Arabidopsis lyrata 46 2e-165 580
WERAM-Prp-0037 EMJ15852 Prunus persica 48 4e-165 579
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 42 7e-158 555
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 55 2e-153 540
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 43 4e-152 536
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 43 2e-150 531
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 49 6e-138 489
WERAM-Amt-0041 ERN17369 Amborella trichopoda 45 2e-136 484
WERAM-Ori-0030 BGIOSGA009342-PA Oryza indica 48 9e-136 482
WERAM-Org-0029 ORGLA02G0333900.1 Oryza glaberrima 48 1e-135 481
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 48 2e-135 481
WERAM-Orbr-0045 OB03G31290.1 Oryza brachyantha 48 5e-135 479
WERAM-Tra-0233 Traes_5DL_9DCF29857.2 Triticum aestivum 43 4e-133 473
WERAM-Aet-0048 EMT13865 Aegilops tauschii 43 1e-132 471
WERAM-Orni-0087 ONIVA08G02050.1 Oryza nivara 43 8e-132 469
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 44 4e-131 466
WERAM-Orb-0029 OBART02G38100.1 Oryza barthii 47 3e-130 464
WERAM-Orm-0018 OMERI02G00250.1 Oryza meridionalis 42 4e-130 463
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 46 5e-128 456
WERAM-Orp-0036 OPUNC03G20970.1 Oryza punctata 46 3e-125 447
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 44 3e-118 424
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 30 1e-39 162
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 32 1e-38 159
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 31 3e-38 158
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 31 3e-38 158
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 30 9e-38 156
WERAM-Mod-0072 ENSMODP00000027999.1 Monodelphis domestica 31 2e-37 155
WERAM-Ora-0091 ENSOANP00000016437.2 Ornithorhynchus anatinus 31 2e-37 155
WERAM-Fia-0125 ENSFALP00000010570.1 Ficedula albicollis 30 1e-36 152
WERAM-Gaga-0143 ENSGALP00000036346.1 Gallus gallus 30 2e-36 152
WERAM-Meg-0127 ENSMGAP00000013877.2 Meleagris gallopavo 30 2e-36 152
WERAM-Sah-0148 ENSSHAP00000015447.1 Sarcophilus harrisii 30 2e-36 152
WERAM-Ova-0218 ENSOARP00000022207.1 Ovis aries 30 2e-36 152
WERAM-Pes-0047 ENSPSIP00000007045.1 Pelodiscus sinensis 30 6e-36 150
WERAM-Orc-0105 ENSOCUP00000008900.3 Oryctolagus cuniculus 30 1e-35 149
WERAM-Ptv-0098 ENSPVAP00000008907.1 Pteropus vampyrus 30 1e-35 149
WERAM-Bot-0126 ENSBTAP00000018069.5 Bos taurus 30 1e-35 149
WERAM-Sus-0059 ENSSSCP00000008777.2 Sus scrofa 30 3e-35 148
WERAM-Fec-0111 ENSFCAP00000009754.3 Felis catus 30 3e-35 148
WERAM-Mup-0099 ENSMPUP00000009177.1 Mustela putorius furo 30 3e-35 148
WERAM-Aim-0108 ENSAMEP00000010467.1 Ailuropoda melanoleuca 30 3e-35 148
WERAM-Caf-0086 ENSCAFP00000011182.3 Canis familiaris 30 3e-35 148
WERAM-Cap-0195 ENSCPOP00000020827.1 Cavia porcellus 30 3e-35 148
WERAM-Tag-0135 ENSTGUP00000011149.1 Taeniopygia guttata 29 3e-35 148
WERAM-Chs-0197 ENSCSAP00000012405.1 Chlorocebus sabaeus 29 4e-35 147
WERAM-Tas-0095 ENSTSYP00000010010.1 Tarsius syrichta 29 4e-35 147
WERAM-Hos-0087 ENSP00000323659.5 Homo sapiens 29 4e-35 147
WERAM-Gog-0083 ENSGGOP00000006802.2 Gorilla gorilla 29 5e-35 147
WERAM-Poa-0107 ENSPPYP00000013616.2 Pongo abelii 29 5e-35 147
WERAM-Pat-0097 ENSPTRP00000042227.4 Pan troglodytes 29 5e-35 147
WERAM-Ocp-0022 ENSOPRP00000001989.2 Ochotona princeps 29 6e-35 147
WERAM-Nol-0029 ENSNLEP00000003424.1 Nomascus leucogenys 29 6e-35 147
WERAM-Tut-0121 ENSTTRP00000009851.1 Tursiops truncatus 29 1e-34 145
WERAM-Prc-0027 ENSPCAP00000002242.1 Procavia capensis 30 3e-34 144
WERAM-Mum-0192 ENSMUSP00000128789.1 Mus musculus 30 5e-34 144
WERAM-Otg-0117 ENSOGAP00000010248.2 Otolemur garnettii 30 6e-34 144
WERAM-Paa-0087 ENSPANP00000002284.1 Papio anubis 30 7e-34 143
WERAM-Mam-0113 ENSMMUP00000017247.2 Macaca mulatta 29 9e-34 143
WERAM-Ran-0048 ENSRNOP00000041218.4 Rattus norvegicus 29 1e-33 142
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 29 6e-33 140
WERAM-Caj-0082 ENSCJAP00000013430.1 Callithrix jacchus 27 4e-29 127
Created Date 25-Jun-2016