WERAM Information

Tag Content
WERAM ID WERAM-Sot-0018
Ensembl Protein ID PGSC0003DMT400016153
Gene Name PGSC0003DMG400006314
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400006314 PGSC0003DMT400016153 PGSC0003DMT400016153
PGSC0003DMG400006314 PGSC0003DMT400016155 PGSC0003DMT400016155
PGSC0003DMG400006314 PGSC0003DMT400016156 PGSC0003DMT400016156
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 8.50e-13 49.6 193 261
Organism Solanum tuberosum
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt   2 ehevsepFrepvdpqleipdYydiikePmdLstikerleegnYss.peefvkDvrlifnNakaynenkss 70 
                           +h+  ++F+++ d  ++  +Y+ +i+++mdL+t+++r++ g Y s p++++ D+ lifnNa  y  ++ss
  PGSC0003DMT400016153 193 SHKRGSVFKRRLDS-QKTDKYKSMIRQHMDLETVQARIDDGSYCScPSKLYLDLLLIFNNAIVYFAKSSS 261
                           68999*********.8*****************************9******************988776 PP
Protein Sequence
(Fasta)		MEEEREQSLK EQSLDDGQKP DLEDVKEERS QNDKNSGADV KPEDSTGKPV SSEESDRENR 60
SFNESNSTEN RETGVKNEPE PVEIGEDKPV QEVKPVSEED SYNDSSSDRQ EEKKARRDSG 120
DLRDTVSGSK EETKENSDVQ STATLTKRKR QRGGDGGRSG GDAAEMGSPA VGIKGDGAAK 180
SEPLIEFLDI IRSHKRGSVF KRRLDSQKTD KYKSMIRQHM DLETVQARID DGSYCSCPSK 240
LYLDLLLIFN NAIVYFAKSS SESSAANELR GIVMEELKKT RTQLKDVSPL KIQPKPELER 300
SDSLLAKHKS TVPIVVCRKR SSISAKAAAS SGNNKPEKPA DSKPPLNPKP PAIKSSSNEE 360
ESSIKLGVKE KPVTGVRSMR RSSKGRSTNN NNNNNASQSN SNQNTNAKQS NSSGDKKEEA 420
KPEKKKEESK KRGAAADFLK RIKKNSPTKG TLVEALKNNP PEDDVVVKGN KRDQQKKKVD 480
ERREAPVRRS GASKDEGSPS KRSVGRPPKR GGGGREVVVQ EKRGRENSEK DDSTKRPKKR 540
SRR 543
Nucleotide Sequence
(Fasta)		CGCGAAAGTA GTAAAACCAA TTCCGCAACT CGCACGTGCT ACCCGCTTCG GATACAATTT 60
GAAGGAAGGG TCAAATAAGG AATTCATCTA AAATGAAAGG GCAAAACCGT CAATTGATTA 120
GATCAAATCG CTTGCTTCAG ATCAGGCCCA TGGCTTACTA CACCTATAAA TGCCCAAATG 180
CCTCAATTCG TCAACCCATT CAAAAACCCA ACAACACAAA AAACTCAAAG ACACACTAAA 240
AAGATAAAAT TAAAGACGGG TATCTAAATT AATCTACACG AAGAAGACGA AAACTAAAAA 300
CCTAACAAAA AAAAAGAGAG CATAAAATAC CTAATCAAAC CCTAGGCTTA ATTACCTGTA 360
ATTATAATTT ATAACTCCCA TTTTTTCATA TGTTATGTTA TATATATGTG TGTGCGTCTA 420
TGTGTAAAGG AAAATAGAAT GGAAAAAGAC TCAGCAGCAG CTACAACGAC GACGAAGAAG 480
ACGATATGGA GTACATGGGA AGAACTTTTG TTAGCGTTTG CTGTGAAAAG GCATGGGCTA 540
AAGGACTGGG AATCTGTAGC CATGGAACTC CAAAACCGTA TATCGTTACC TGCTTTATTG 600
ACCGCTCAAA TTTGTAAGGA GAAATACAGG GACCTCCGCC GCCGCTTCAT GAATAGCTAT 660
AACAATAGTT ATGATGAAAA AATCATAGAA CAGGATGTAG ATGGAAATGG AGATGTAACG 720
ATTCCTTGGA TTGAGGAGTT GAGACAACTA CGGGTTGCTG AGCTTCAACA AGAGGTTCAA 780
CGCTACGATC TTTCGATCCA GTAAAATCTC TCAGTTTCCC TTTTTTTTTT GATTTTTTTT 840
TAAAATTTTG ATTTTTTCGG TTGTATGTGA ATTTTTTTTT ACGTGGAAAA AAATTCAGTA 900
ATTGGATCTG AGAGATTTTG ATCTGTGATG TGATATGAAC AGGTCGTTGG AGTTGAAAGT 960
GAAAAAGATG GAGGAAGAGA GAGAACAGAG TTTGAAGGAG CAGAGTTTAG ACGATGGCCA 1020
GAAACCAGAT CTGGAGGATG TGAAGGAAGA GAGATCGCAA AACGACAAAA ACAGCGGTGC 1080
TGATGTTAAG CCGGAGGATT CCACCGGAAA GCCCGTTTCG AGCGAGGAGT CAGACCGCGA 1140
AAACCGGTCG TTTAACGAGT CTAATTCGAC GGAGAACAGA GAAACCGGTG TTAAAAATGA 1200
ACCGGAACCG GTCGAGATCG GTGAAGACAA ACCGGTTCAG GAGGTTAAAC CGGTCAGTGA 1260
AGAGGACTCG TATAACGATA GCAGTTCAGA TAGACAGGAG GAAAAGAAAG CCCGTCGCGA 1320
CTCAGGCGAT TTACGTGATA CAGTGAGCGG GTCTAAGGAA GAGACTAAGG AAAACAGTGA 1380
CGTGCAAAGC ACGGCGACTT TAACGAAGAG AAAGCGGCAG CGCGGTGGCG ATGGAGGTAG 1440
AAGCGGCGGA GATGCGGCAG AGATGGGTTC TCCAGCCGTT GGAATTAAAG GGGATGGTGC 1500
GGCGAAATCA GAGCCGTTAA TTGAGTTTTT AGATATTATC AGGTCGCATA AGCGCGGCTC 1560
TGTATTCAAG CGCCGGCTAG ACAGCCAGAA AACGGACAAG TACAAGAGTA TGATCCGACA 1620
ACACATGGAT CTTGAAACGG TTCAAGCCCG GATTGATGAC GGATCCTATT GCTCTTGCCC 1680
ATCCAAATTA TACTTGGACC TCCTACTCAT CTTCAACAAT GCCATCGTCT ACTTCGCTAA 1740
GTCATCCTCA GAGTCAAGTG CAGCGAACGA ACTCCGTGGC ATTGTAATGG AAGAATTAAA 1800
AAAGACCAGA ACCCAGTTGA AGGATGTATC ACCATTAAAG ATCCAACCCA AGCCCGAATT 1860
GGAGAGATCC GATTCTTTGC TTGCAAAACA CAAGTCTACC GTTCCTATAG TAGTCTGTCG 1920
CAAGAGGAGC TCCATTTCAG CAAAAGCAGC AGCTTCTTCT GGTAATAACA AGCCAGAAAA 1980
ACCAGCTGAT AGTAAACCTC CTCTGAACCC AAAGCCACCT GCGATAAAAT CTTCTTCAAA 2040
TGAAGAAGAG AGTTCAATCA AGCTTGGGGT GAAAGAAAAG CCAGTGACTG GGGTAAGAAG 2100
TATGAGGAGG AGCAGCAAAG GCCGTTCGAC TAATAATAAT AATAATAATA ATGCTTCACA 2160
ATCCAACAGC AACCAAAACA CGAATGCTAA GCAAAGCAAT AGCAGCGGGG ACAAAAAGGA 2220
AGAGGCGAAA CCGGAGAAGA AGAAAGAAGA AAGTAAAAAA CGAGGAGCTG CAGCGGACTT 2280
TTTGAAGAGG ATAAAGAAGA ATTCTCCTAC TAAAGGAACG TTGGTGGAAG CGTTGAAGAA 2340
TAATCCTCCA GAGGATGATG TTGTTGTTAA AGGTAACAAA AGAGATCAGC AAAAGAAAAA 2400
AGTTGATGAA CGGAGAGAAG CTCCAGTGAG GCGAAGTGGT GCTAGCAAGG ATGAAGGTAG 2460
TCCATCGAAA AGGAGCGTAG GTCGCCCACC AAAGAGAGGT GGAGGTGGTA GAGAAGTAGT 2520
TGTGCAGGAA AAACGTGGAA GGGAAAATAG TGAAAAAGAT GATTCTACGA AACGGCCAAA 2580
GAAACGGTCA AGGAGGTAAA ATTATGATGA ATCAAGTTTA AGTAGTGATG TTAATTAGGA 2640
GGAGTTTAGT CTTATTTTGC CGTGTATATT TCACATCTTT TATTTTTAGT GTCAGGTTTT 2700
GATTTTGGGA ATATTACATG TTAGAATTAG TTCACATCTT TTGCTTCTGT AGCATGTTAT 2760
TGGTGTTTGT ACCTTTTCCT TGTTACAGTG AATTTTCTTT TTCTCAATTA GTTTTATGCT 2820
ATTTGTCCCA TAACATTGGT TATTGTTTTT AACCAAAGAG TAATTTAAAG TTGTAGGAGA 2880
AAGAGAAGGA AG 2893
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0008 Solyc01g073950.2.1 Solanum lycopersicum 92 0.0 697
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 43 4e-74 276
WERAM-Glm-0090 GLYMA08G15870.1 Glycine max 38 5e-48 189
WERAM-Thc-0062 EOY09477 Theobroma cacao 35 6e-41 166
WERAM-Pot-0008 POPTR_0001s23640.1 Populus trichocarpa 44 3e-37 154
WERAM-Arl-0077 fgenesh2_kg.4__ 2627__ AT2G44430.1 Arabidopsis lyrata 41 8e-36 149
WERAM-Prp-0043 EMJ22101 Prunus persica 44 4e-33 140
WERAM-Art-0058 AT2G44430.1 Arabidopsis thaliana 49 1e-31 135
WERAM-Bro-0065 Bo4g021680.1 Brassica oleracea 37 1e-29 129
WERAM-Brr-0020 Bra004831.1-P Brassica rapa 35 2e-29 127
WERAM-Met-0045 AES66032 Medicago truncatula 39 1e-27 121
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 40 3e-22 104
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 37 3e-22 103
WERAM-Tru-0078 TRIUR3_28812-P1 Triticum urartu 35 9e-22 102
WERAM-Sob-0110 Sb07g027680.1 Sorghum bicolor 43 1e-20 98.6
WERAM-Brd-0083 BRADI3G40060.1 Brachypodium distachyon 34 2e-20 98.2
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 38 4e-19 94.0
WERAM-Aet-0108 EMT21081 Aegilops tauschii 34 3e-18 90.9
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 37 9e-18 89.4
WERAM-Orni-0095 ONIVA08G22660.1 Oryza nivara 37 1e-17 89.4
WERAM-Ors-0085 OS08T0510700-01 Oryza sativa 36 3e-17 87.4
WERAM-Orr-0099 ORUFI08G22500.1 Oryza rufipogon 36 3e-17 87.4
WERAM-Ori-0091 BGIOSGA026697-PA Oryza indica 36 3e-17 87.4
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 37 5e-17 87.0
WERAM-Sem-0102 EFJ33930 Selaginella moellendorffii 41 3e-16 84.3
WERAM-Zem-0018 GRMZM2G022499_P01 Zea mays 34 3e-15 81.3
WERAM-Sei-0046 Si013408m Setaria italica 40 3e-15 80.9
WERAM-Amt-0030 ERN11592 Amborella trichopoda 49 4e-14 77.4
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 46 2e-13 75.1
WERAM-Tra-0222 Traes_5DL_195E7FFEF.2 Triticum aestivum 37 2e-09 61.6
WERAM-Hov-0028 MLOC_20426.3 Hordeum vulgare 33 1e-08 59.3
WERAM-Spr-0015 CBQ70270 Sporisorium reilianum 33 7e-08 56.6
WERAM-Crn-0037 AAW45314 Cryptococcus neoformans 34 2e-07 55.5
Created Date 25-Jun-2016