WERAM Information

Tag Content
WERAM ID WERAM-Sot-0011
Ensembl Protein ID PGSC0003DMT400009967
Gene Name PGSC0003DMG400003902
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400003902 PGSC0003DMT400009967 PGSC0003DMT400009967
PGSC0003DMG400003902 PGSC0003DMT400009969 PGSC0003DMT400009969
PGSC0003DMG400003902 PGSC0003DMT400009971 PGSC0003DMT400009971
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.80e-12 48.7 94 241
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                           ++C++C  +d g  ++v Cd+C+++fH +C +l+   +p g +wyC+ C++
  PGSC0003DMT400009967  94 DLCIIC--ADGG--ILVLCDGCPRAFHKECASLS--AVPRG-KWYCKYCEN 137
                           58****..3444..49******************..*****.*******87 PP
               PHD.txt   3 iClvCg...kddegekemvqCdeCddwfHlkCvklp....lsslpegkswy.CpsCk 51 
                           +C+ C    k+++g ++++ Cd+C++ +H+ C+k      l++lp+g +w+ C  Ck
  PGSC0003DMT400009967 187 LCR-CYdfsKSGFGPRTVILCDQCEKEYHVGCLKKRkiaeLKELPKG-KWFcCADCK 241
                           455.5245566666666*****************99999999*****.876266776 PP
Protein Sequence
(Fasta)		MHWLVFEEGG LPDGTEVAYY SRGKKLLVGY KQGSGIVCSC CNSEVSPSQF EAHAGWASRK 60
KPYGYIYASN GVSLHEFAMS LLRGRKSSVK DSDDLCIICA DGGILVLCDG CPRAFHKECA 120
SLSAVPRGKW YCKYCENKFQ REKFVEHNAN AIAAGRISGI DPIDQISKRC MRTVKNPEEA 180
EVIACALCRC YDFSKSGFGP RTVILCDQCE KEYHVGCLKK RKIAELKELP KGKWFCCADC 240
KRIYSALQNS LNSGEERLSE SCLGAVRMKL KEKRMDFVGD LDVRWRLISG KITSRETRVL 300
LAEAVSIFHD CFDPIVDSAT GRDFIPSMVY GRNIRGQDFG GMYCAILTVN SIVVSAGILR 360
IFGQDMAELP LVATRIGSQG QGYFQLLLSC IEKLLAFLNV RRFILPSAVE AMSIWTEKFG 420
FKEIPPDLLV SYKKTCWQLI TFKGTCMLEK MVPKCRIIRH EETEAEAEAE TETETETETE 480
SDAPDE 486
Nucleotide Sequence
(Fasta)		TTTTCACGCT CTCTGCCTCC CTTACCCCAT CCCCCTAATA ACACCCCACC CAATGCTCCG 60
TCTTCTTCTC ACAAATTCCT CTGAAGGGTT TCAGTTTCAC TCAAATTCTC CCTTTTTCTC 120
AGATCCATAG CTCACTTTTT TCCGATGACG GCGCCGATGG CCGAGTCTCC GATTGTCAAA 180
GCCGGAGCCG GAATTGGTAC CGGTACTGGT GATCCGTGTT GCATTGAACA GGAATCGAAC 240
GGTTCGGTTC ATGGCGTTAG GTACAACGAA GTTGCTTCTG TTAAGGATCG TGATAGGAAT 300
GGAGTTGTTG TGTATAGGAG GAACAAGAGG TTGAAGAGAG CGGCTAATGT TGATGGCGGT 360
GAATCGACTG ATTCGAAGTT TAATAATTCA GGTGGTAAAT GTGTGATTAA GGATGGTACA 420
GAGGGTATTT CCGGCAATGT GGAGAGTGTG AAGGAAATGG TGGAGGTTGA AGTCAAAGAG 480
GAGTCAACGT TGACAGTGAA CTGTGCTACT GTTGCTGGGA GGAGGCTTAC AAGGTCGGTT 540
TTGAAGCTGA ATGTGGAACC TCTTGATATG TCGAATGAGA ATTTGGAAGT GTTGGACGGG 600
AAATTGATCA CATGTAATGG TGCATCTCCT GCAGAAGAAT CAGAGATGGA AATATCGAAG 660
AAGATTTCGA TTATAGGAAG GCCTACTACC GTTAGGGAGC TTTTTGAGAC TGGTTTGCTC 720
GAGGGCTATC CGGTTTTCTA TAATGGTGGC AAGAGGGGAA TTCCACTGAG AGGAACAGTC 780
AAAGATATTG GAATTCTATG TTCTTGTGAT CTGTGCAAGG GTGCCAGGGT TGTTCCTCCT 840
GGCAAATTTG AGATCCATGC ATGTAAAACT TATAGACGTG CATCACAGTA TATCTGCCTG 900
GAAAATGGAA AGAGTCTCCT TGATGTGGTC AAAGAATGTA GGAAAGGTTC TTTGAAGAAC 960
TTGGAAGCAA CAATTCGAAG CTTCATTGGC CCGATTCCTG TGAAGGAAAA TATCATATGT 1020
CAGAATTGCA ATGGGTCTTT TGCTGCAACT TCAGTTGGAA AAATTGACCA AATTTGTGAT 1080
TCTTGCATAA TCTCTTTAAG ATCAGAAGCC ACTCCATCTC AGTCAATAAA AGTTGAAGCT 1140
GGGATATCTG AGCCTGACCT GAACATAAAT TCCTCTGAAG CTTCAACTGC GTCAGATACT 1200
TCTCTAAAAA GGCGTAGAGG AAGAAAAAAG AAAAAGCCTG TGGAAATATG TTCAAGGAAA 1260
AAGTCCCTTA GAATATCTTC AGCACATACA ATCTCAGGAA GGAAGGATCA GTTGAAGACA 1320
CCAAACAAGT TATCCAATCC AGTTCTTTCT CCACACTCAA ATGAAGCTTC CCCGATGTGC 1380
AACTCTTTCA GAGATAAAAT GCAGAGCAAG ATCTCAAAAA AGTTGATTGT CAAAATCCAT 1440
TGCAGCTTCA AATTCCTCAA CAATTGGTTC TCTTGGTGTT TCAGTACACT CTAGGACCCA 1500
ATGGAAAATT ACAAAGAAGG ATCAGAAAAT GCATTGGTTG GTTTTTGAGG AAGGTGGACT 1560
GCCCGATGGG ACTGAAGTTG CTTATTATTC TCGTGGAAAG AAATTGCTTG TCGGTTATAA 1620
GCAGGGATCT GGTATAGTGT GTTCTTGCTG CAACTCTGAG GTTAGTCCAT CACAATTTGA 1680
AGCTCATGCA GGTTGGGCAT CGCGCAAAAA ACCCTATGGA TACATTTACG CTTCAAATGG 1740
AGTGTCTCTA CATGAATTTG CTATGTCCCT ATTGAGAGGT CGTAAGTCTT CTGTCAAAGA 1800
CAGTGATGAT CTGTGCATCA TATGCGCAGA TGGTGGAATA CTGGTGCTTT GTGATGGATG 1860
TCCAAGGGCC TTCCATAAAG AGTGTGCATC ATTGTCAGCT GTTCCCCGTG GTAAATGGTA 1920
CTGTAAGTAT TGTGAAAACA AGTTTCAGAG GGAGAAGTTT GTGGAGCACA ATGCTAATGC 1980
CATTGCTGCT GGGAGGATTT CTGGTATTGA CCCCATAGAT CAAATAAGTA AGCGTTGCAT 2040
GCGTACTGTC AAGAACCCAG AAGAGGCAGA AGTTATAGCA TGTGCTTTAT GCAGGTGTTA 2100
TGATTTTAGC AAGTCTGGAT TTGGTCCACG CACGGTTATC CTCTGTGACC AGTGTGAGAA 2160
GGAATATCAT GTTGGCTGCT TGAAGAAACG CAAGATAGCA GAGTTAAAGG AGTTGCCTAA 2220
AGGAAAATGG TTCTGCTGTG CGGATTGCAA GAGGATATAT TCTGCACTGC AAAATTCACT 2280
GAACTCAGGA GAAGAAAGAC TGTCAGAATC TTGCCTAGGT GCAGTAAGGA TGAAGCTAAA 2340
GGAAAAACGT ATGGATTTTG TTGGTGATCT AGATGTGAGA TGGAGACTTA TCAGTGGCAA 2400
AATTACTTCT CGTGAAACCA GAGTGTTATT AGCAGAAGCT GTTTCAATCT TCCATGATTG 2460
CTTTGATCCT ATTGTTGATT CGGCAACTGG ACGTGATTTC ATTCCATCTA TGGTCTATGG 2520
AAGGAATATT AGGGGCCAAG ACTTTGGGGG GATGTACTGT GCTATATTGA CAGTAAATTC 2580
AATAGTAGTA TCAGCAGGGA TCCTCCGTAT TTTTGGTCAG GATATGGCAG AGCTTCCTCT 2640
TGTGGCAACA CGTATTGGTA GCCAGGGCCA GGGTTACTTT CAGTTGCTCC TCTCCTGCAT 2700
AGAGAAATTG CTTGCATTTT TGAATGTAAG AAGATTTATA CTCCCTTCTG CTGTTGAAGC 2760
AATGTCAATA TGGACCGAGA AATTTGGATT CAAAGAGATA CCACCAGATC TGCTTGTCAG 2820
CTACAAAAAA ACCTGTTGGC AATTGATTAC CTTCAAAGGA ACATGTATGC TGGAAAAAAT 2880
GGTTCCTAAA TGTCGAATCA TTCGGCATGA GGAAACTGAA GCTGAAGCTG AAGCTGAAAC 2940
TGAAACTGAA ACTGAAACTG AAACTGAAAG TGATGCACCA GATGAGTAGA GGTAGCCAAA 3000
GATGATTTCC CCCCCATTTT GTAGAGCGAT TTCTGATCAC ATATGTATAT TTGAGTCTTA 3060
TTTTATCAAA GAGGGATGGA TTTGAGAGTA TCAAATTTTT GTAAAGAAGG TTCTTATTAC 3120
TCAAAAGTTA TAGCTGGTTG CATGTTTATA TGCCAGGTAA TAAATTTAGC CCACAAAGAG 3180
TTTTGATATC TTAATGAATT TCCACCACCT CTTAATATCA AATTAGTGTT GCCA 3235
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0106 Solyc09g008520.2.1 Solanum lycopersicum 97 0.0 931
WERAM-Prp-0031 EMJ05208 Prunus persica 72 0.0 714
WERAM-Thc-0061 EOY08018 Theobroma cacao 69 0.0 692
WERAM-Met-0159 AES81946 Medicago truncatula 67 0.0 674
WERAM-Glm-0253 GLYMA19G37190.2 Glycine max 69 0.0 672
WERAM-Pot-0076 POPTR_0006s12180.1 Populus trichocarpa 67 0.0 668
WERAM-Arl-0074 fgenesh2_kg.4__ 1712__ AT2G36720.1 Arabidopsis lyrata 61 9e-174 607
WERAM-Art-0054 AT2G36720.1 Arabidopsis thaliana 60 5e-173 604
WERAM-Viv-0053 VIT_08s0007g04490.t01 Vitis vinifera 64 2e-171 599
WERAM-Bro-0084 Bo4g186380.1 Brassica oleracea 59 4e-168 588
WERAM-Brr-0090 Bra017226.1-P Brassica rapa 58 3e-165 579
WERAM-Mua-0072 GSMUA_Achr4P12040_001 Musa acuminata 59 8e-158 554
WERAM-Amt-0092 ERN04758 Amborella trichopoda 58 7e-157 551
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 55 8e-149 524
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 54 2e-147 520
WERAM-Sei-0021 Si005834m Setaria italica 55 5e-146 514
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 54 3e-142 502
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 54 6e-139 491
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 52 4e-137 485
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 52 2e-136 483
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 52 3e-136 482
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 52 8e-133 471
WERAM-Orr-0058 ORUFI06G00030.1 Oryza rufipogon 48 1e-121 434
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 48 1e-121 434
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 48 2e-121 433
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 49 2e-121 433
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 47 2e-120 430
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 48 3e-120 429
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 49 6e-120 428
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 47 3e-119 426
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 48 9e-117 417
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 48 9e-109 391
WERAM-Php-0109 PP1S50_31V6.1 Physcomitrella patens 41 2e-105 380
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 30 2e-51 201
WERAM-Aet-0069 EMT23788 Aegilops tauschii 29 2e-46 184
WERAM-Ect-0045 ENSETEP00000004800.1 Echinops telfairi 30 1e-14 79.0
WERAM-Xet-0118 ENSXETP00000041129.3 Xenopus tropicalis 32 4e-14 77.0
WERAM-Pes-0148 ENSPSIP00000017808.1 Pelodiscus sinensis 31 7e-14 76.3
WERAM-Chh-0003 ENSCHOP00000000249.1 Choloepus hoffmanni 30 1e-13 75.5
WERAM-Ict-0076 ENSSTOP00000006839.2 Ictidomys tridecemlineatus 30 1e-13 75.5
WERAM-Caf-0156 ENSCAFP00000022067.4 Canis familiaris 30 1e-13 75.5
WERAM-Myl-0158 ENSMLUP00000013056.2 Myotis lucifugus 30 1e-13 75.5
WERAM-Mup-0195 ENSMPUP00000016754.1 Mustela putorius furo 30 1e-13 75.5
WERAM-Bot-0134 ENSBTAP00000019612.5 Bos taurus 30 1e-13 75.5
WERAM-Ptv-0138 ENSPVAP00000011854.1 Pteropus vampyrus 30 1e-13 75.5
WERAM-Fec-0075 ENSFCAP00000006385.3 Felis catus 30 1e-13 75.5
WERAM-Otg-0102 ENSOGAP00000008965.2 Otolemur garnettii 30 1e-13 75.5
WERAM-Orc-0077 ENSOCUP00000020108.1 Oryctolagus cuniculus 30 1e-13 75.5
WERAM-Mim-0059 ENSMICP00000006034.1 Microcebus murinus 30 1e-13 75.5
WERAM-Aim-0162 ENSAMEP00000015022.1 Ailuropoda melanoleuca 30 1e-13 75.5
WERAM-Sus-0008 ENSSSCP00000000743.2 Sus scrofa 30 1e-13 75.5
WERAM-Mum-0216 ENSMUSP00000060054.8 Mus musculus 30 1e-13 75.5
WERAM-Ere-0102 ENSEEUP00000010821.1 Erinaceus europaeus 30 1e-13 75.5
WERAM-Dan-0007 ENSDNOP00000000870.3 Dasypus novemcinctus 30 1e-13 75.1
WERAM-Cap-0103 ENSCPOP00000007645.2 Cavia porcellus 30 1e-13 75.1
WERAM-Ran-0118 ENSRNOP00000052823.4 Rattus norvegicus 30 1e-13 75.1
WERAM-Ova-0075 ENSOARP00000007963.1 Ovis aries 30 1e-13 75.1
WERAM-Tut-0182 ENSTTRP00000015268.1 Tursiops truncatus 30 1e-13 75.1
WERAM-Orn-0112 ENSONIP00000011684.1 Oreochromis niloticus 31 2e-13 74.7
Created Date 25-Jun-2016