WERAM Information

Tag Content
WERAM ID WERAM-Org-0048
Ensembl Protein ID ORGLA04G0270900.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ORGLA04G0270900 ORGLA04G0270900.1 ORGLA04G0270900.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.60e-10 41.7 6 101
Organism Oryza glaberrima
Domain Profile
  Me_Reader PHD
            PHD.txt  2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51
                       ++C +C   d ge  +++Cd+C+  +H++C++ +  +lpeg swyC +C+
  ORGLA04G0270900.1  6 DTCGFC--GDGGE--LLCCDNCPSTYHQTCLSDQ--ELPEG-SWYCHNCT 48
                       58****..33332..9******************..*****.*******7 PP
            PHD.txt   3 iClvCgkddegeke.....mvqCdeCddwfHlkCvklplsslpegks..wyCps 49 
                        +C+ Cg++  +++      +++C +C d +H +C++ ++ ++ +++s  w+C +
  ORGLA04G0270900.1  48 TCRSCGNPLSEKEVstfsaILKCLQCGDSYHDTCIDQEMLPCGDKQSniWFCGR 101
                        5999*75555544456698*******************55554332356***64 PP
Protein Sequence
(Fasta)		MDENDDTCGF CGDGGELLCC DNCPSTYHQT CLSDQELPEG SWYCHNCTCR SCGNPLSEKE 60
VSTFSAILKC LQCGDSYHDT CIDQEMLPCG DKQSNIWFCG RYCKEIFIGL HNHVGIENFL 120
DNELSWSILK CNTDGRKLHS SKKIAHMTEC NTKLAVALTI LEECFVRMVD PRTGVDMIPH 180
VLYNKGSNFA RLDYQGFYTV ILEKGDEILC VASIRVHGTK AAELPFVATS VDYRRQGMCR 240
RLMDTIEMML RSFHVETLVL SAIPELVNTW VSGFGFKPIE DNEKKQLRNV NLMLFPGTSL 300
LTKRLDGITA AKSEEDKDAY NVSGLPNGKC LPSRKGNGHL ELHDLDLLEA ELNTEDATNA 360
SFRALKHECG PATWFNHAKL AVGEV 385
Nucleotide Sequence
(Fasta)		ATGGATGAAA ATGATGATAC GTGTGGTTTC TGTGGAGATG GTGGTGAATT ACTTTGCTGC 60
GACAATTGCC CATCAACATA TCATCAAACT TGTTTGTCTG ACCAGGAACT TCCAGAAGGC 120
AGTTGGTACT GCCATAACTG CACATGCCGG AGTTGTGGGA ATCCACTTAG TGAAAAGGAG 180
GTTTCAACAT TCTCGGCTAT CTTGAAATGT TTGCAGTGTG GAGATTCATA CCATGATACT 240
TGCATTGACC AGGAGATGCT CCCCTGTGGG GATAAACAAT CCAACATATG GTTTTGTGGG 300
AGATACTGTA AAGAGATATT TATTGGATTA CACAATCACG TTGGAATAGA GAATTTTCTT 360
GACAACGAGC TTTCATGGAG CATATTGAAG TGCAACACTG ATGGGCGGAA GCTACATTCT 420
TCCAAGAAGA TTGCGCATAT GACAGAATGC AATACAAAAT TAGCTGTGGC TCTTACTATA 480
TTGGAGGAAT GTTTTGTTCG CATGGTGGAT CCTAGAACTG GTGTAGACAT GATACCGCAT 540
GTCTTGTACA ATAAGGGATC AAACTTCGCT CGCTTAGATT ACCAGGGGTT CTATACAGTA 600
ATCCTGGAGA AAGGTGATGA GATTTTATGT GTAGCATCTA TCAGAGTACA TGGGACCAAA 660
GCAGCTGAGC TTCCATTTGT TGCTACTTCT GTGGATTATC GCCGCCAAGG AATGTGCCGA 720
AGACTTATGG ACACCATTGA AATGATGCTT AGATCATTCC ATGTTGAGAC ATTGGTCCTT 780
TCTGCCATCC CAGAGTTGGT TAATACATGG GTGTCAGGAT TTGGTTTCAA ACCCATTGAA 840
GATAATGAGA AGAAACAACT TCGTAATGTG AACTTGATGT TATTTCCTGG AACATCCTTG 900
CTAACTAAAA GATTGGATGG AATTACAGCT GCCAAATCAG AAGAGGACAA GGATGCATAC 960
AATGTTTCTG GATTACCTAA TGGTAAGTGT TTGCCTAGCA GGAAAGGAAA CGGGCATCTT 1020
GAACTCCATG ATCTTGACTT GTTAGAGGCC GAGTTGAATA CTGAGGATGC AACCAATGCT 1080
TCTTTCAGAG CACTGAAACA TGAATGTGGT CCTGCAACAT GGTTTAATCA TGCCAAGCTA 1140
GCTGTTGGGG AAGTGTGA 1159
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 99 0.0 769
WERAM-Orb-0048 OBART04G30730.1 Oryza barthii 99 0.0 759
WERAM-Orgl-0047 OGLUM04G30610.1 Oryza glumaepatula 99 0.0 759
WERAM-Orni-0045 ONIVA04G29920.1 Oryza nivara 99 0.0 759
WERAM-Orl-0058 KN539151.1_FGP008 Oryza longistaminata 99 0.0 759
WERAM-Orr-0048 ORUFI04G32440.1 Oryza rufipogon 98 0.0 757
WERAM-Ori-0046 BGIOSGA014033-PA Oryza indica 99 0.0 746
WERAM-Orbr-0058 OB04G37750.1 Oryza brachyantha 90 0.0 713
WERAM-Tru-0009 TRIUR3_05331-P1 Triticum urartu 79 0.0 640
WERAM-Aet-0007 EMT20462 Aegilops tauschii 78 0.0 633
WERAM-Tra-0043 Traes_2AL_F68D162A8.2 Triticum aestivum 78 0.0 631
WERAM-Zem-0025 GRMZM2G038050_P01 Zea mays 77 5e-174 607
WERAM-Hov-0086 MLOC_65889.1 Hordeum vulgare 79 6e-174 607
WERAM-Sob-0094 Sb06g034065.1 Sorghum bicolor 77 5e-170 594
WERAM-Sei-0077 Si020995m Setaria italica 77 7e-170 593
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 84 8e-167 583
WERAM-Amt-0045 ERN15883 Amborella trichopoda 57 8e-111 397
WERAM-Prp-0010 EMJ14932 Prunus persica 59 2e-110 396
WERAM-Viv-0120 VIT_19s0014g01500.t01 Vitis vinifera 55 3e-108 389
WERAM-Thc-0086 EOY13226 Theobroma cacao 58 5e-107 385
WERAM-Glm-0154 GLYMA12G35760.2 Glycine max 57 3e-106 382
WERAM-Met-0046 KEH38626 Medicago truncatula 53 3e-103 372
WERAM-Sot-0038 PGSC0003DMT400032367 Solanum tuberosum 52 5e-103 372
WERAM-Sol-0097 Solyc07g062600.2.1 Solanum lycopersicum 57 6e-103 371
WERAM-Mua-0094 GSMUA_Achr6P25440_001 Musa acuminata 54 8e-101 364
WERAM-Art-0071 AT3G14980.1 Arabidopsis thaliana 56 1e-100 363
WERAM-Bro-0100 Bo5g127560.1 Brassica oleracea 55 7e-99 358
WERAM-Brr-0136 Bra027290.1-P Brassica rapa 54 8e-98 354
WERAM-Arl-0059 fgenesh2_kg.3__ 1623__ AT3G14980.1 Arabidopsis lyrata 56 3e-96 348
WERAM-Sem-0133 EFJ35658 Selaginella moellendorffii 46 6e-82 301
WERAM-Orm-0068 OMERI07G03260.1 Oryza meridionalis 47 2e-81 300
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 47 1e-79 294
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 45 2e-79 293
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 40 2e-75 280
WERAM-Pot-0028 POPTR_0002s11940.1 Populus trichocarpa 37 4e-52 202
WERAM-Eqc-0088 ENSECAP00000010777.1 Equus caballus 53 9e-11 65.5
WERAM-Mum-0005 ENSMUSP00000019257.8 Mus musculus 47 1e-10 64.7
WERAM-Gaa-0200 ENSGACP00000024737.1 Gasterosteus aculeatus 54 2e-10 64.3
WERAM-Gaga-0043 ENSGALP00000006407.3 Gallus gallus 51 2e-10 64.3
WERAM-Dan-0005 ENSDNOP00000000444.3 Dasypus novemcinctus 51 2e-10 64.3
WERAM-Gog-0138 ENSGGOP00000012040.2 Gorilla gorilla 51 2e-10 63.9
WERAM-Myl-0150 ENSMLUP00000012292.2 Myotis lucifugus 51 2e-10 63.9
WERAM-Chh-0099 ENSCHOP00000011432.1 Choloepus hoffmanni 51 2e-10 63.9
WERAM-Poa-0071 ENSPPYP00000009124.2 Pongo abelii 51 2e-10 63.9
WERAM-Lac-0129 ENSLACP00000015259.1 Latimeria chalumnae 51 2e-10 63.9
WERAM-Mod-0180 ENSMODP00000024106.3 Monodelphis domestica 51 2e-10 63.9
WERAM-Fia-0082 ENSFALP00000006610.1 Ficedula albicollis 51 3e-10 63.9
WERAM-Chs-0086 ENSCSAP00000003351.1 Chlorocebus sabaeus 51 3e-10 63.9
WERAM-Orc-0150 ENSOCUP00000013081.2 Oryctolagus cuniculus 51 3e-10 63.9
WERAM-Mam-0199 ENSMMUP00000028388.2 Macaca mulatta 51 3e-10 63.9
WERAM-Ran-0061 ENSRNOP00000053077.3 Rattus norvegicus 51 3e-10 63.9
WERAM-Caj-0130 ENSCJAP00000024434.2 Callithrix jacchus 51 3e-10 63.9
WERAM-Ict-0039 ENSSTOP00000003153.2 Ictidomys tridecemlineatus 51 3e-10 63.9
WERAM-Bot-0145 ENSBTAP00000021255.5 Bos taurus 51 3e-10 63.9
WERAM-Aim-0057 ENSAMEP00000004762.1 Ailuropoda melanoleuca 51 3e-10 63.9
WERAM-Otg-0088 ENSOGAP00000007119.2 Otolemur garnettii 51 3e-10 63.9
WERAM-Nol-0031 ENSNLEP00000003880.1 Nomascus leucogenys 51 3e-10 63.9
Created Date 25-Jun-2016