WERAM Information

Tag Content
WERAM ID WERAM-Sot-0038
Ensembl Protein ID PGSC0003DMT400032367
Gene Name PGSC0003DMG400012431
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400012431 PGSC0003DMT400032367 PGSC0003DMT400032367
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.60e-08 35.4 40 133
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt  3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51
                          +C  C   ++g + +++Cd+C+  fHl C+  +  +lpeg swyC +C+
  PGSC0003DMT400032367 40 SCGRC---GDGGE-LICCDNCPATFHLACLFTQ--ELPEG-SWYCSQCT 81
                          57667...44433.9******************..*****.*******7 PP
               PHD.txt   4 ClvCgkddegeke.......mvqCdeCddwfHlkCvklplsslp.egkswyCpsC 50 
                           C+ Cg   +  k+         +C++C++ +H  C +l  ++   +++ w+C + 
  PGSC0003DMT400032367  82 CQKCG---DVVKCseasspgGYKCSQCEHKYHEACSNLRITKSGlASDTWFCSES 133
                           55554...332222234556778****************5555445568***753 PP
Protein Sequence
(Fasta)		MENGKPFTLC QLEAWSDEYK ARRAVSQTSQ AEERDQNDDS CGRCGDGGEL ICCDNCPATF 60
HLACLFTQEL PEGSWYCSQC TCQKCGDVVK CSEASSPGGY KCSQCEHKYH EACSNLRITK 120
SGLASDTWFC SESCQEVYEG LHSRIGFVNH LADGISWTLL RCIHGDHKVH SQRFIALKAE 180
CNSKLAVSLT IMEECFLPMV DPRTGIDMIP HVIYSWGSQF ARLNYLGFYT MILEKDDISV 240
AVASVRIHGV TVAEMPLIAT CSKYRRQGMC RRLLNSILEM LKSFKVEKLV ISAIPGVVET 300
WTCGFGFEPL EDHEKRSLSH INLMVFPGTV WLKKSLFQVA DADQPSVRPG GTVSCHENGL 360
TIIEPMQHCM PSQDVNAGAD VRHPPQSESF QFCEDQGGSN LAGHELRQGC EGNTINPERQ 420
TETGLPDSND LQPVEVQYVV DALPGKCSKL SEEPVLTYIS HGEAGCRVDN LQMNVDSHFC 480
LDEVN 485
Nucleotide Sequence
(Fasta)		ATGGAAAATG GTAAGCCATT CACCTTATGT CAGCTTGAGG CTTGGTCAGA TGAATACAAG 60
GCACGGAGAG CAGTTTCTCA AACTTCCCAA GCTGAGGAAA GGGACCAAAA TGATGACAGT 120
TGCGGGCGAT GTGGTGATGG AGGCGAACTG ATTTGCTGTG ACAACTGTCC AGCTACATTC 180
CATCTAGCAT GCTTGTTCAC ACAGGAGCTT CCTGAAGGGA GCTGGTACTG TTCACAGTGC 240
ACATGCCAGA AATGTGGGGA CGTGGTCAAA TGCAGTGAAG CAAGTTCTCC TGGTGGATAT 300
AAATGTTCAC AATGTGAACA TAAATATCAT GAAGCATGCA GTAATTTAAG GATTACAAAA 360
AGTGGTCTGG CCTCTGATAC ATGGTTCTGC AGCGAAAGCT GTCAAGAGGT TTATGAAGGT 420
CTTCACTCTC GCATTGGGTT TGTTAATCAT CTGGCTGATG GCATTTCGTG GACTCTTCTG 480
AGGTGCATTC ATGGTGACCA CAAAGTTCAT TCTCAGCGGT TTATTGCTTT GAAGGCAGAA 540
TGCAACTCCA AGTTAGCAGT TTCCCTTACG ATTATGGAGG AGTGCTTTCT TCCCATGGTG 600
GATCCAAGAA CTGGCATAGA TATGATACCC CATGTGATAT ACAGCTGGGG ATCACAATTT 660
GCTCGGTTAA ATTATCTTGG ATTCTACACG ATGATCCTGG AGAAAGATGA CATATCAGTA 720
GCTGTAGCAT CAGTAAGGAT CCATGGGGTA ACAGTTGCTG AGATGCCTCT GATTGCAACA 780
TGCAGTAAAT ACCGTCGCCA GGGAATGTGC AGGCGCCTAC TAAATTCTAT ACTGGAGATG 840
CTAAAGTCGT TCAAGGTTGA GAAACTTGTC ATATCAGCTA TCCCAGGTGT AGTGGAAACA 900
TGGACTTGTG GCTTTGGCTT TGAACCCTTG GAAGATCATG AGAAACGAAG TCTAAGTCAT 960
ATCAACCTCA TGGTGTTCCC TGGAACTGTA TGGTTGAAGA AGTCTTTGTT TCAAGTTGCT 1020
GATGCAGATC AACCGAGTGT TCGTCCGGGT GGAACAGTAT CTTGCCATGA AAATGGCCTC 1080
ACCATTATCG AGCCCATGCA ACATTGCATG CCATCTCAAG ATGTCAACGC AGGAGCTGAT 1140
GTCAGACACC CACCTCAGTC TGAGAGTTTT CAATTCTGTG AAGATCAAGG TGGTAGTAAT 1200
CTTGCTGGTC ATGAGCTTAG GCAAGGCTGT GAAGGAAACA CCATTAATCC AGAGCGTCAA 1260
ACTGAAACCG GGTTGCCGGA CTCAAATGAT TTACAACCAG TGGAAGTCCA GTATGTTGTT 1320
GATGCTCTGC CTGGCAAGTG CTCAAAACTC TCCGAGGAAC CGGTTCTGAC ATATATCAGT 1380
CATGGGGAAG CAGGTTGTAG AGTAGATAAT TTGCAGATGA ATGTGGATAG TCATTTTTGT 1440
TTAGATGAAG TGAATTAA 1459
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0097 Solyc07g062600.2.1 Solanum lycopersicum 93 0.0 937
WERAM-Prp-0010 EMJ14932 Prunus persica 71 2e-148 523
WERAM-Thc-0086 EOY13226 Theobroma cacao 64 8e-148 521
WERAM-Glm-0170 GLYMA13G34641.1 Glycine max 60 8e-141 498
WERAM-Viv-0120 VIT_19s0014g01500.t01 Vitis vinifera 67 1e-140 496
WERAM-Amt-0045 ERN15883 Amborella trichopoda 68 1e-139 493
WERAM-Met-0046 KEH38626 Medicago truncatula 65 1e-135 480
WERAM-Art-0071 AT3G14980.1 Arabidopsis thaliana 52 6e-132 468
WERAM-Arl-0059 fgenesh2_kg.3__ 1623__ AT3G14980.1 Arabidopsis lyrata 53 4e-128 455
WERAM-Bro-0100 Bo5g127560.1 Brassica oleracea 60 3e-124 442
WERAM-Brr-0136 Bra027290.1-P Brassica rapa 60 4e-124 442
WERAM-Mua-0094 GSMUA_Achr6P25440_001 Musa acuminata 58 1e-120 430
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 56 1e-114 410
WERAM-Tru-0009 TRIUR3_05331-P1 Triticum urartu 56 2e-114 410
WERAM-Aet-0007 EMT20462 Aegilops tauschii 56 5e-114 408
WERAM-Orbr-0058 OB04G37750.1 Oryza brachyantha 49 5e-113 405
WERAM-Tra-0043 Traes_2AL_F68D162A8.2 Triticum aestivum 55 5e-111 398
WERAM-Sei-0077 Si020995m Setaria italica 54 6e-111 398
WERAM-Sob-0096 Sb07g000645.1 Sorghum bicolor 56 2e-110 397
WERAM-Orni-0045 ONIVA04G29920.1 Oryza nivara 50 3e-110 396
WERAM-Orgl-0047 OGLUM04G30610.1 Oryza glumaepatula 50 3e-110 396
WERAM-Hov-0086 MLOC_65889.1 Hordeum vulgare 51 3e-110 396
WERAM-Orr-0048 ORUFI04G32440.1 Oryza rufipogon 50 3e-110 396
WERAM-Orl-0058 KN539151.1_FGP008 Oryza longistaminata 50 4e-110 395
WERAM-Orb-0048 OBART04G30730.1 Oryza barthii 50 6e-110 395
WERAM-Zem-0025 GRMZM2G038050_P01 Zea mays 52 1e-106 384
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 52 7e-104 375
WERAM-Org-0048 ORGLA04G0270900.1 Oryza glaberrima 52 5e-103 372
WERAM-Ori-0046 BGIOSGA014033-PA Oryza indica 52 3e-100 363
WERAM-Sem-0141 EFJ30219 Selaginella moellendorffii 43 7e-80 295
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 41 3e-75 280
WERAM-Orm-0068 OMERI07G03260.1 Oryza meridionalis 44 7e-75 278
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 43 5e-73 272
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 52 1e-61 234
WERAM-Pot-0028 POPTR_0002s11940.1 Populus trichocarpa 35 1e-52 204
WERAM-Pes-0100 ENSPSIP00000012511.1 Pelodiscus sinensis 57 7e-12 69.7
WERAM-Gaga-0012 ENSGALP00000040523.2 Gallus gallus 37 8e-12 69.3
WERAM-Prc-0079 ENSPCAP00000007005.1 Procavia capensis 44 1e-11 68.9
WERAM-Orla-0061 ENSORLP00000007931.1 Oryzias latipes 43 2e-11 68.2
WERAM-Xim-0007 ENSXMAP00000001083.1 Xiphophorus maculatus 41 2e-11 67.8
WERAM-Pof-0104 ENSPFOP00000009594.2 Poecilia formosa 41 2e-11 67.8
WERAM-Eqc-0088 ENSECAP00000010777.1 Equus caballus 57 3e-11 67.8
WERAM-Sus-0175 ENSSSCP00000026284.1 Sus scrofa 44 3e-11 67.4
WERAM-Chs-0092 ENSCSAP00000004087.1 Chlorocebus sabaeus 62 3e-11 67.4
WERAM-Mum-0005 ENSMUSP00000019257.8 Mus musculus 51 3e-11 67.4
WERAM-Pat-0115 ENSPTRP00000024049.4 Pan troglodytes 48 4e-11 67.0
WERAM-Hos-0171 ENSP00000291582.5 Homo sapiens 48 4e-11 67.0
WERAM-Gog-0061 ENSGGOP00000005561.2 Gorilla gorilla 48 4e-11 67.0
WERAM-Tag-0192 ENSTGUP00000017724.1 Taeniopygia guttata 57 5e-11 66.6
WERAM-Myl-0123 ENSMLUP00000009992.2 Myotis lucifugus 62 5e-11 66.6
WERAM-Aim-0121 ENSAMEP00000011418.1 Ailuropoda melanoleuca 54 5e-11 66.6
WERAM-Ptv-0117 ENSPVAP00000010379.1 Pteropus vampyrus 60 5e-11 66.6
WERAM-Ova-0125 ENSOARP00000012667.1 Ovis aries 57 5e-11 66.6
WERAM-Fia-0165 ENSFALP00000014081.1 Ficedula albicollis 57 5e-11 66.6
WERAM-Ran-0061 ENSRNOP00000053077.3 Rattus norvegicus 43 6e-11 66.6
WERAM-Mam-0031 ENSMMUP00000005576.2 Macaca mulatta 60 6e-11 66.6
WERAM-Bot-0191 ENSBTAP00000031798.3 Bos taurus 52 6e-11 66.2
WERAM-Fec-0089 ENSFCAP00000007349.3 Felis catus 52 7e-11 66.2
Created Date 25-Jun-2016