WERAM Information

Tag Content
WERAM ID WERAM-Orgl-0047
Ensembl Protein ID OGLUM04G30610.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OGLUM04G30610 OGLUM04G30610.1 OGLUM04G30610.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.50e-09 37.9 988 1083
Organism Oryza glumaepatula
Domain Profile
  Me_Reader PHD
          PHD.txt    2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51  
                       ++C +C   d ge  +++Cd+C+  +H++C++ +  +lpeg swyC +C+
  OGLUM04G30610.1  988 DTCGFC--GDGGE--LLCCDNCPSTYHQTCLSDQ--ELPEG-SWYCHNCT 1030
                       58****..33332..9******************..*****.*******7 PP
          PHD.txt    3 iClvCgkddegeke.....mvqCdeCddwfHlkCvklplsslpegks..wyCps 49  
                       +C+ Cg++  +++      +++C +C d +H +C++ ++ ++ +++s  w+C +
  OGLUM04G30610.1 1030 TCRSCGNPLSEKEVstfsaILKCLQCGDSYHDTCIDQEMLPCGDKQSniWFCGR 1083
                       5999*75555544456698*******************55554332356***64 PP
Protein Sequence
(Fasta)		MAAAHKLGFR EEDALRFLFG EDLLAMHHSA AASSFDRSQP EVQVFRDVFS PSPPLLHVAE 60
TSSLLPTAAA AAPAPAPPPA PAPSLHHHLH ALQPQPAPVE VDAAAIDPKH SHGPVLHGNG 120
NGNGGLELDA ALQGFVAYWQ GGGSSLSVTD ADLFHDMMQP TPPQHSAGPP PPPPPAAAGM 180
CTALAASSSN SGVEDPLPSY MEALADFSDF HNDALLSDPF LNQWLQDNNH FPTDMSFTYD 240
QPQMLETTSH TLYSATTPDL SVTGPDHFSL YSNTVYDTTL LPHLSRDSTA SAHFVQLDNL 300
CQNFGTPGAS IGSLDDAADV PADNTQHYGT TAVASKRNLS RELPDQLEVH AQHLFMDAGW 360
TIKPRKRNDR AKMASYFTAP HREVVHTSLT QAWKFCGKKL YEATPCSQRG KCPKEWSDVD 420
TFWKDLTDTM AYVDKMLVNR QDAPTLLHRW ELLDPFIAVV FIGRKITALQ QHKTLRAVDS 480
STYVLNDSRN VPSESKSMLK SSDLLPTRMI QPTPVITDSD CSTLATESGN GNHALQSCHD 540
LEDGHNGDTN LSTLCTQSQL YCAAGDTSQR TENPISESNG QRELWSGATL INSAVKKTKK 600
KSKRISDIDS TGLDGLHSES FMQPAVEIVL NQETELASVE LSFAENNMRS EEHGICSSVG 660
TSKRHLKAES KLAKLNANNQ SNKLDVLLPS EVMQTSMLQG EETVEQPAGF NILPENGSTP 720
TESGSSKFIP IGNEEKKLLS LKESSIGIFP KDVHNLPTVN SVPVNLSYES NAAVLKTDLS 780
QESPTCKAVA AKRKPQAWEK YAKKRPRVLR INDDDLLITA MVKNRDLGSC HKFAADSIFL 840
DAKKFTKFKS SKKCGRLLAR MSGKGGSNLL GGKRVSLARK TVLCWLIATG FLTVKDVIQY 900
RNLKSNEVVK DGQVTWEGIL CNCCTKTFSI SDFKVHGGCS LPKSSLGLFL QSGKSYTLCQ 960
VEAWSAEFLS RKCDASGRKV EAMDENDDTC GFCGDGGELL CCDNCPSTYH QTCLSDQELP 1020
EGSWYCHNCT CRSCGNPLSE KEVSTFSAIL KCLQCGDSYH DTCIDQEMLP CGDKQSNIWF 1080
CGRYCKEIFI GLHNHVGIEN FLDNELSWSI LKCNTDGRKL HSSKKIAHMT ECNTKLAVAL 1140
TILEECFVRM VDPRTGVDMI PHVLSNFARL DYQGFYTVIL EKGDEILCVA SIRVHGTKAA 1200
ELPFIATSVD YRRQGMCRRL MDTIEMMLRS FHVETLVLSA IPELVNTWVS GFGFKPIEDN 1260
EKKQLRNVNL MLFPGTSLLT KRLDGITAAK SEEDKDAYNV SGLPNGKCLP SRKGNGHLEL 1320
HDLDLLEAEL NTEDATNASF RALKHECGPA TWFNHAKATH PSSSSPVLCN EFSRMQFTGP 1380
QLFYCKTERH LPTAVHDSIP SEVQVNGADS HARNNKGWID GLIYPCNMKN ECLRCNAKLY 1440
FFALLSEAPE SRSLGQKQNM TDPFLSDVDR DLPKLYAVTV DGSYKLHGGQ KGYLQKHG 1498
Nucleotide Sequence
(Fasta)		ATGGCCGCCG CCCACAAGCT AGGGTTCAGG GAGGAGGACG CCCTCAGGTT CCTCTTCGGC 60
GAGGATCTCC TCGCCATGCA CCACTCCGCC GCAGCCTCCT CCTTCGACAG GTCGCAACCC 120
GAGGTCCAGG TCTTCAGGGA CGTCTTCTCT CCGTCTCCAC CTCTTCTTCA TGTGGCCGAG 180
ACTTCATCCC TGCTCCCCAC TGCTGCTGCT GCTGCGCCTG CGCCTGCGCC TCCGCCTGCG 240
CCTGCGCCTT CACTCCACCA CCACCTGCAC GCGCTGCAGC CTCAACCCGC GCCCGTGGAG 300
GTCGACGCCG CCGCCATCGA TCCCAAACAT TCTCACGGCC CCGTGCTACA TGGGAATGGG 360
AATGGGAATG GAGGCCTCGA GTTGGACGCC GCATTGCAGG GCTTCGTTGC TTACTGGCAA 420
GGCGGAGGCA GCTCTCTAAG TGTAACCGAC GCTGACCTCT TCCATGACAT GATGCAACCA 480
ACGCCGCCGC AACACTCCGC TGGACCTCCT CCTCCTCCCC CTCCTGCTGC TGCTGGAATG 540
TGCACCGCCT TGGCTGCCAG CAGCAGCAAC AGTGGAGTCG AAGATCCTTT GCCTTCCTAT 600
ATGGAGGCAC TAGCAGACTT CTCTGATTTC CACAATGACG CTCTTCTTTC CGATCCCTTC 660
TTGAATCAGT GGCTCCAAGA TAACAACCAC TTCCCCACTG ATATGTCCTT CACCTATGAT 720
CAACCCCAAA TGCTTGAGAC CACTAGCCAT ACTCTATATT CAGCTACTAC ACCAGATCTG 780
TCTGTCACAG GACCAGACCA CTTCTCACTC TACAGCAACA CAGTCTATGA TACTACGCTT 840
CTGCCTCACC TGTCCCGCGA CTCTACTGCT TCTGCTCACT TTGTCCAACT TGACAACCTC 900
TGTCAGAATT TTGGTACGCC AGGCGCAAGT ATTGGTTCGC TTGATGATGC TGCTGATGTC 960
CCTGCTGACA ACACTCAACA CTACGGCACT ACTGCTGTTG CTTCCAAGAG GAATTTAAGC 1020
AGGGAACTCC CTGATCAGCT GGAGGTACAT GCTCAGCACC TTTTCATGGA TGCTGGCTGG 1080
ACCATCAAGC CACGGAAAAG GAATGACAGG GCTAAGATGG CATCCTATTT CACTGCACCA 1140
CACAGGGAGG TTGTTCATAC CTCTCTAACT CAGGCTTGGA AGTTCTGTGG CAAGAAATTG 1200
TATGAAGCTA CCCCGTGTTC ACAACGCGGA AAGTGTCCTA AGGAGTGGTC AGATGTCGAT 1260
ACATTTTGGA AGGACCTCAC AGATACAATG GCTTATGTCG ATAAGATGCT CGTGAACCGC 1320
CAAGATGCAC CCACTCTTCT TCATCGGTGG GAGCTTTTGG ATCCTTTCAT AGCTGTTGTG 1380
TTCATTGGTA GGAAAATTAC TGCTCTGCAA CAACATAAAA CTCTTAGAGC TGTTGATAGT 1440
TCGACCTATG TTCTCAATGA CAGCAGGAAT GTCCCCTCAG AAAGTAAGAG CATGCTGAAA 1500
TCCAGTGATT TGTTGCCCAC TCGCATGATT CAACCTACTC CAGTGATCAC GGACTCTGAT 1560
TGTAGCACGC TAGCAACTGA GAGTGGCAAC GGGAATCATG CTTTACAGAG CTGCCATGAC 1620
TTGGAGGATG GCCACAACGG GGATACTAAC CTGAGTACTC TCTGCACACA GAGCCAGCTG 1680
TATTGCGCGG CAGGTGACAC AAGTCAAAGA ACAGAAAATC CCATTTCTGA AAGTAATGGA 1740
CAAAGGGAAC TTTGGTCTGG AGCAACACTT ATTAATAGCG CAGTGAAAAA GACTAAGAAG 1800
AAATCCAAAA GGATATCAGA TATTGATTCA ACTGGACTAG ATGGACTGCA TTCTGAAAGT 1860
TTTATGCAGC CTGCTGTGGA AATTGTGTTA AACCAAGAAA CCGAACTAGC AAGTGTGGAA 1920
TTGTCTTTTG CAGAAAACAA TATGCGCTCT GAGGAACATG GTATCTGTTC ATCTGTTGGC 1980
ACATCGAAAA GGCACTTGAA AGCTGAATCC AAATTAGCAA AGCTAAATGC AAACAACCAA 2040
AGCAACAAGC TCGACGTGCT CTTGCCTTCA GAAGTCATGC AAACCAGCAT GTTACAGGGC 2100
GAGGAGACTG TTGAGCAACC TGCAGGATTC AACATACTCC CAGAAAATGG TTCTACTCCA 2160
ACGGAATCAG GTTCCAGCAA GTTCATCCCC ATAGGAAATG AAGAGAAGAA GTTGCTGTCG 2220
CTGAAGGAAT CATCCATTGG AATTTTCCCC AAGGATGTAC ATAATCTTCC AACGGTCAAC 2280
TCTGTTCCTG TTAACCTATC CTACGAATCT AATGCTGCTG TCCTGAAAAC TGATTTATCT 2340
CAGGAGTCAC CGACGTGCAA GGCAGTTGCT GCTAAAAGAA AACCTCAAGC TTGGGAGAAG 2400
TATGCCAAGA AAAGGCCCCG TGTGTTACGT ATCAATGACG ATGATCTTTT GATCACAGCT 2460
ATGGTGAAAA ATAGGGATCT TGGCTCCTGC CACAAATTTG CTGCAGACTC CATTTTTTTG 2520
GATGCAAAGA AGTTTACAAA GTTTAAGAGC TCAAAGAAAT GTGGCAGGCT ACTTGCTCGA 2580
ATGTCCGGAA AAGGAGGATC AAATCTGTTG GGTGGGAAGA GAGTAAGTTT GGCACGGAAA 2640
ACAGTTCTCT GCTGGTTGAT TGCCACTGGC TTTCTGACCG TAAAAGATGT TATACAGTAC 2700
CGGAATCTGA AGAGCAACGA AGTTGTTAAG GATGGGCAGG TTACCTGGGA AGGCATTCTG 2760
TGCAATTGTT GCACCAAGAC CTTTTCTATA TCAGACTTCA AGGTTCATGG CGGTTGCAGT 2820
TTACCAAAGT CCTCATTGGG CCTCTTTCTA CAGTCTGGCA AATCGTACAC TCTATGCCAG 2880
GTAGAAGCTT GGTCTGCTGA ATTTCTAAGT AGGAAATGTG ATGCATCTGG TAGAAAAGTT 2940
GAGGCGATGG ATGAAAATGA TGATACGTGT GGTTTCTGTG GAGATGGTGG TGAATTACTT 3000
TGCTGCGACA ATTGCCCATC AACATATCAT CAAACTTGTT TGTCTGACCA GGAACTTCCA 3060
GAAGGCAGTT GGTACTGCCA TAACTGCACA TGCCGGAGTT GTGGGAATCC ACTTAGTGAA 3120
AAGGAGGTTT CAACATTCTC GGCTATCTTG AAATGTTTGC AGTGTGGAGA TTCATACCAT 3180
GATACTTGCA TTGACCAGGA GATGCTCCCC TGTGGGGATA AACAATCCAA CATATGGTTT 3240
TGTGGGAGAT ACTGTAAAGA GATATTTATT GGATTACACA ATCACGTTGG AATAGAGAAT 3300
TTTCTTGACA ACGAGCTTTC ATGGAGCATA TTGAAGTGCA ACACTGATGG GCGGAAGCTA 3360
CATTCTTCCA AGAAGATTGC GCATATGACA GAATGCAATA CAAAATTAGC TGTGGCTCTT 3420
ACTATATTGG AGGAATGTTT TGTTCGCATG GTGGATCCTA GAACTGGTGT AGACATGATA 3480
CCGCATGTCT TATCAAACTT CGCTCGCTTA GATTACCAGG GGTTCTATAC AGTAATCCTG 3540
GAGAAAGGCG ATGAGATTTT ATGTGTAGCA TCTATCAGAG TACATGGGAC CAAAGCAGCT 3600
GAGCTTCCAT TTATTGCTAC TTCTGTGGAT TATCGCCGCC AAGGAATGTG CCGAAGACTT 3660
ATGGACACCA TTGAAATGAT GCTTAGATCA TTCCATGTTG AGACATTGGT CCTTTCTGCC 3720
ATCCCAGAGT TGGTTAATAC ATGGGTGTCA GGATTTGGTT TCAAACCCAT TGAAGATAAT 3780
GAGAAGAAAC AACTTCGTAA TGTGAACTTG ATGTTATTTC CTGGAACATC CTTGCTAACT 3840
AAAAGATTGG ATGGAATTAC AGCTGCCAAA TCAGAAGAGG ACAAGGATGC ATACAATGTT 3900
TCTGGATTAC CTAATGGTAA GTGTTTGCCT AGCAGGAAAG GAAACGGGCA TCTTGAACTC 3960
CATGATCTTG ACTTGTTAGA GGCCGAGTTG AATACTGAGG ATGCAACCAA TGCTTCTTTC 4020
AGAGCACTGA AACATGAATG TGGTCCTGCA ACATGGTTTA ATCATGCCAA GGCTACTCAT 4080
CCTTCCAGTT CCAGTCCAGT ACTATGCAAT GAATTCTCCC GGATGCAATT TACCGGACCA 4140
CAGCTCTTTT ATTGCAAAAC AGAAAGACAT CTTCCAACTG CAGTTCATGA TTCAATTCCC 4200
TCAGAGGTGC AGGTTAATGG AGCAGATAGT CATGCAAGAA ATAACAAGGG ATGGATAGAT 4260
GGTCTCATCT ATCCCTGCAA TATGAAAAAT GAATGTTTGA GATGCAATGC GAAACTGTAT 4320
TTTTTTGCTT TACTGAGTGA AGCACCTGAG TCGCGATCAC TTGGACAAAA GCAGAACATG 4380
ACTGACCCTT TTCTGAGTGA TGTTGATAGG GATTTACCTA AGCTGTATGC AGTCACTGTT 4440
GATGGGTCGT ATAAGCTGCA TGGTGGCCAG AAGGGTTACT TGCAGAAACA TGGTTAA 4498
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orni-0045 ONIVA04G29920.1 Oryza nivara 99 0.0 2789
WERAM-Orr-0048 ORUFI04G32440.1 Oryza rufipogon 99 0.0 2785
WERAM-Orb-0048 OBART04G30730.1 Oryza barthii 99 0.0 2771
WERAM-Orl-0058 KN539151.1_FGP008 Oryza longistaminata 89 0.0 2523
WERAM-Orbr-0058 OB04G37750.1 Oryza brachyantha 86 0.0 1975
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 64 0.0 1447
WERAM-Sob-0094 Sb06g034065.1 Sorghum bicolor 57 0.0 1371
WERAM-Sei-0077 Si020995m Setaria italica 61 0.0 1335
WERAM-Zem-0025 GRMZM2G038050_P01 Zea mays 60 0.0 1293
WERAM-Ori-0046 BGIOSGA014033-PA Oryza indica 100 0.0 1059
WERAM-Aet-0007 EMT20462 Aegilops tauschii 65 0.0 938
WERAM-Tru-0009 TRIUR3_05331-P1 Triticum urartu 69 0.0 936
WERAM-Tra-0043 Traes_2AL_F68D162A8.2 Triticum aestivum 69 0.0 918
WERAM-Hov-0086 MLOC_65889.1 Hordeum vulgare 72 0.0 902
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 99 0.0 775
WERAM-Org-0048 ORGLA04G0270900.1 Oryza glaberrima 99 0.0 758
WERAM-Amt-0045 ERN15883 Amborella trichopoda 50 3e-144 511
WERAM-Viv-0120 VIT_19s0014g01500.t01 Vitis vinifera 50 2e-143 508
WERAM-Prp-0010 EMJ14932 Prunus persica 51 6e-143 506
WERAM-Thc-0086 EOY13226 Theobroma cacao 50 3e-140 498
WERAM-Glm-0154 GLYMA12G35760.2 Glycine max 49 2e-138 491
WERAM-Sol-0097 Solyc07g062600.2.1 Solanum lycopersicum 51 6e-136 483
WERAM-Met-0046 KEH38626 Medicago truncatula 49 2e-135 481
WERAM-Mua-0094 GSMUA_Achr6P25440_001 Musa acuminata 47 1e-133 475
WERAM-Art-0071 AT3G14980.1 Arabidopsis thaliana 47 7e-125 446
WERAM-Arl-0059 fgenesh2_kg.3__ 1623__ AT3G14980.1 Arabidopsis lyrata 48 2e-119 428
WERAM-Bro-0100 Bo5g127560.1 Brassica oleracea 50 1e-118 426
WERAM-Brr-0136 Bra027290.1-P Brassica rapa 50 6e-118 423
WERAM-Sot-0038 PGSC0003DMT400032367 Solanum tuberosum 50 1e-109 395
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 43 7e-95 347
WERAM-Orm-0068 OMERI07G03260.1 Oryza meridionalis 41 1e-94 346
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 41 2e-94 345
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 42 2e-93 342
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 38 5e-86 317
WERAM-Pot-0028 POPTR_0002s11940.1 Populus trichocarpa 34 2e-65 249
WERAM-Ten-0050 ENSTNIP00000006981.1 Tetraodon nigroviridis 49 9e-12 70.9
WERAM-Pof-0104 ENSPFOP00000009594.2 Poecilia formosa 35 2e-11 70.1
WERAM-Xim-0007 ENSXMAP00000001083.1 Xiphophorus maculatus 35 2e-11 70.1
WERAM-Orla-0061 ENSORLP00000007931.1 Oryzias latipes 35 3e-11 69.3
WERAM-Sus-0136 ENSSSCP00000018838.2 Sus scrofa 43 3e-11 69.3
WERAM-Ran-0061 ENSRNOP00000053077.3 Rattus norvegicus 45 3e-11 68.9
WERAM-Mum-0149 ENSMUSP00000044990.7 Mus musculus 45 3e-11 68.9
WERAM-Myl-0150 ENSMLUP00000012292.2 Myotis lucifugus 45 4e-11 68.9
WERAM-Anc-0062 ENSACAP00000006236.3 Anolis carolinensis 52 4e-11 68.9
WERAM-Gog-0138 ENSGGOP00000012040.2 Gorilla gorilla 45 4e-11 68.9
WERAM-Poa-0071 ENSPPYP00000009124.2 Pongo abelii 45 4e-11 68.9
WERAM-Chs-0086 ENSCSAP00000003351.1 Chlorocebus sabaeus 45 4e-11 68.9
WERAM-Mam-0199 ENSMMUP00000028388.2 Macaca mulatta 45 4e-11 68.9
WERAM-Paa-0182 ENSPANP00000019881.1 Papio anubis 45 4e-11 68.9
WERAM-Orc-0150 ENSOCUP00000013081.2 Oryctolagus cuniculus 45 4e-11 68.6
WERAM-Dar-0151 ENSDARP00000014790.7 Danio rerio 35 4e-11 68.6
WERAM-Leo-0037 ENSLOCP00000005903.1 Lepisosteus oculatus 46 4e-11 68.6
WERAM-Ict-0039 ENSSTOP00000003153.2 Ictidomys tridecemlineatus 45 4e-11 68.6
WERAM-Nol-0031 ENSNLEP00000003880.1 Nomascus leucogenys 45 4e-11 68.6
WERAM-Loa-0125 ENSLAFP00000011602.3 Loxodonta africana 45 4e-11 68.6
Created Date 25-Jun-2016