WERAM Information

Tag Content
WERAM ID WERAM-Xet-0120
Ensembl Protein ID ENSXETP00000041702.2
Gene Name trim28
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXETG00000019245.3 ENSXETT00000041702.2 ENSXETP00000041702.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 2.00e-08 34.4 641 709
Organism Xenopus tropicalis
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt   2 ehevsepFrepvdpqleipdYydiikeP.mdLstikerleegn...YsspeefvkDvrlifnNakaynenkssvq 72 
                           +he + pF++ +        Y++    P +dL+ i++rl++++   Ys+pe+fv+Dv+ +f+   ++ e+k+ vq
  ENSXETP00000041702.2 641 CHEPCRPFHRLSSS----SLYQEN--DPmIDLTFIRARLQQKRspsYSTPEDFVRDVWMMFRSVSKLAEDKAVVQ 709
                           55555566555555....467774..6648***************************************999886 PP
Protein Sequence
(Fasta)		GGSGEPDGQE LLESCGVCKK QLRADTEPQL LPCLHSVCRA CLPPETPAPE VATNSGDLAS 60
GIFTAVVNCP ICKHQCFQKD IVENYFLKVE PTSEPVTETI QRCTSCDDNT VANSYCVECT 120
EWLCETCVEA HQRVKYTKDH TIKILGSSKK ETERAVYCPL HKNEPLMLYC ESCDTLTCRD 180
CQLQGHKDHQ YQFLEDAVKN QRKVLSALVK RLGDKHTALQ KSTKDVRTSI RQVSDLQKRL 240
QVDVKMAILH IMKELNKRGK LLVNDMQKVT EGHQDKLEKQ HWAMNKLQKH QEHILRFATW 300
ALESDNNIAL LLSKKLIHFQ LHRALKVIVD PVEPLGDLKF QWDSDTWTKH AEFFGKIVCD 360
KTGVPQSSSG SLAAQSINSA SSQPMQVQVY GFCAFEGESS GFDTFPGQKR GRSSEGDVNE 420
LLKKVPRVSL ERLDVDLNPD TQPPVFKVFP GNTNEDYNLI VIERGNLPGE AVVKVKIVNI 480
VLKVPPAVRA WQNEEAMETG IPIPTSDRSE KSLVIRPDGS TETVPPVIRQ PTAAGNATSS 540
DFQGASSGGF SDGLSGARCK VCQKEGALLT CSQCRSLFHR DCHLPSVMEM TSGAWKCMLC 600
QDLVPKNDQG VDMIQSPAVD SSRLSPSDQK KCERLLLEML CHEPCRPFHR LSSSSLYQEN 660
DPMIDLTFIR ARLQQKRSPS YSTPEDFVRD VWMMFRSVSK LAEDKAVVQS IIELQSFFET 720
RLNHLFGDRK FSCLLGE 737
Nucleotide Sequence
(Fasta)		GGAGGCAGCG GGGAGCCCGA CGGGCAGGAG CTACTGGAGA GCTGCGGGGT GTGCAAGAAG 60
CAGCTACGGG CGGACACGGA GCCCCAGCTC TTACCGTGCC TGCACTCCGT GTGCCGGGCC 120
TGCCTTCCGC CAGAGACCCC TGCGCCTGAG GTGGCCACTA ACAGCGGAGA CTTGGCTTCA 180
GGTATATTTA CAGCTGTAGT TAATTGCCCC ATATGCAAGC ACCAGTGCTT CCAGAAGGAT 240
ATTGTTGAGA ACTACTTTCT AAAAGTGGAA CCCACTTCCG AACCCGTAAC TGAAACAATT 300
CAGAGATGTA CCAGCTGTGA TGACAATACT GTAGCAAATA GTTACTGCGT CGAGTGCACA 360
GAGTGGCTAT GTGAGACCTG TGTGGAGGCG CATCAGCGAG TGAAATACAC AAAGGATCAC 420
ACCATCAAAA TTCTAGGTTC TTCCAAAAAG GAAACAGAGC GAGCAGTTTA CTGTCCTTTG 480
CATAAAAATG AACCTCTCAT GCTTTATTGT GAATCCTGTG ATACCTTAAC TTGCCGGGAC 540
TGCCAACTAC AGGGACACAA AGATCACCAG TACCAGTTTT TAGAGGATGC TGTTAAAAAT 600
CAAAGGAAGG TACTTTCTGC TCTGGTCAAG CGGCTTGGAG ATAAGCATAC GGCTTTACAG 660
AAATCTACTA AAGATGTTCG AACTTCGATT CGACAGGTGA GTGATTTACA GAAGAGATTG 720
CAAGTGGATG TAAAGATGGC AATCTTGCAC ATAATGAAGG AACTTAATAA ACGTGGAAAA 780
CTACTAGTGA ATGATATGCA GAAAGTAACA GAAGGTCATC AGGATAAACT GGAAAAGCAG 840
CACTGGGCTA TGAACAAATT GCAAAAGCAT CAAGAGCACA TCCTTAGGTT TGCCACGTGG 900
GCACTGGAAA GTGACAACAA CATAGCCTTA TTGCTTTCAA AGAAACTGAT ACATTTTCAG 960
TTGCATCGTG CTCTAAAAGT TATTGTAGAT CCAGTTGAGC CTTTAGGTGA TTTAAAGTTC 1020
CAGTGGGACT CTGATACCTG GACAAAGCAT GCAGAGTTTT TTGGCAAAAT TGTATGCGAC 1080
AAAACAGGTG TTCCTCAGTC ATCTTCTGGA TCGTTGGCAG CCCAGTCTAT AAATTCTGCG 1140
TCATCTCAGC CCATGCAGGT CCAAGTGTAT GGATTTTGTG CCTTTGAGGG AGAATCTTCT 1200
GGATTTGATA CTTTCCCTGG CCAGAAAAGA GGGCGCAGTT CTGAAGGTGA TGTAAATGAG 1260
CTTTTAAAAA AAGTTCCACG TGTCAGTTTA GAGCGCTTGG ATGTAGACCT TAACCCCGAC 1320
ACTCAACCAC CAGTCTTCAA AGTTTTCCCC GGAAACACAA ATGAAGATTA TAATTTAATT 1380
GTAATTGAGA GAGGGAATCT TCCAGGGGAA GCTGTTGTGA AGGTAAAAAT TGTAAATATT 1440
GTGTTAAAAG TGCCCCCTGC TGTTAGGGCC TGGCAAAATG AAGAAGCCAT GGAAACAGGC 1500
ATCCCTATCC CAACATCTGA CCGCTCTGAA AAATCCTTAG TTATTCGACC AGATGGCTCG 1560
ACAGAAACTG TGCCACCTGT AATCCGCCAG CCTACTGCAG CTGGTAATGC CACTTCCTCT 1620
GATTTCCAAG GAGCAAGCAG CGGGGGATTT TCTGATGGGC TCAGTGGTGC CCGTTGTAAA 1680
GTGTGCCAGA AGGAAGGAGC CCTACTGACA TGTAGCCAAT GTAGAAGCCT TTTCCACAGA 1740
GACTGCCACC TACCATCAGT CATGGAAATG ACAAGTGGTG CATGGAAGTG CATGTTGTGC 1800
CAGGATCTCG TGCCCAAAAA CGATCAAGGC GTCGACATGA TTCAGTCACC AGCTGTAGAT 1860
TCCAGCCGTC TGTCTCCGTC TGATCAGAAG AAATGTGAAC GTCTGTTGTT GGAAATGCTT 1920
TGTCATGAGC CGTGCCGGCC CTTCCACAGG TTATCCTCCA GTTCACTTTA CCAGGAAAAT 1980
GATCCTATGA TTGACCTTAC ATTTATTCGT GCCAGACTGC AGCAGAAACG CTCCCCTTCA 2040
TATAGTACAC CTGAAGACTT TGTTAGAGAC GTGTGGATGA TGTTCAGAAG CGTGAGCAAA 2100
CTTGCAGAGG ACAAAGCTGT GGTGCAGTCG ATCATTGAGC TGCAGTCTTT CTTCGAAACA 2160
AGACTTAACC ACCTTTTTGG TGACCGCAAG TTCTCCTGTC TCCTGGGGGA G 2212
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ova-0030 ENSOARP00000004219.1 Ovis aries 56 0.0 798
WERAM-Otg-0221 ENSOGAP00000018045.1 Otolemur garnettii 55 0.0 793
WERAM-Loa-0188 ENSLAFP00000022715.1 Loxodonta africana 55 0.0 791
WERAM-Caf-0029 ENSCAFP00000003412.4 Canis familiaris 56 0.0 789
WERAM-Mum-0015 ENSMUSP00000005705.7 Mus musculus 56 0.0 789
WERAM-Ict-0159 ENSSTOP00000017511.1 Ictidomys tridecemlineatus 55 0.0 788
WERAM-Aim-0085 ENSAMEP00000007951.1 Ailuropoda melanoleuca 55 0.0 788
WERAM-Paa-0099 ENSPANP00000001565.1 Papio anubis 56 0.0 787
WERAM-Chs-0017 ENSCSAP00000016435.1 Chlorocebus sabaeus 56 0.0 787
WERAM-Hos-0120 ENSP00000253024.4 Homo sapiens 56 0.0 785
WERAM-Ran-0164 ENSRNOP00000031061.2 Rattus norvegicus 56 0.0 785
WERAM-Ptv-0160 ENSPVAP00000013180.1 Pteropus vampyrus 55 0.0 777
WERAM-Cap-0067 ENSCPOP00000005181.2 Cavia porcellus 54 0.0 758
WERAM-Anc-0111 ENSACAP00000010492.2 Anolis carolinensis 54 0.0 756
WERAM-Ocp-0151 ENSOPRP00000015562.1 Ochotona princeps 56 0.0 753
WERAM-Gog-0147 ENSGGOP00000013024.2 Gorilla gorilla 55 0.0 751
WERAM-Mam-0187 ENSMMUP00000026375.2 Macaca mulatta 56 0.0 749
WERAM-Orc-0163 ENSOCUP00000014282.2 Oryctolagus cuniculus 55 0.0 747
WERAM-Myl-0157 ENSMLUP00000013021.2 Myotis lucifugus 55 0.0 746
WERAM-Nol-0117 ENSNLEP00000013612.1 Nomascus leucogenys 55 0.0 746
WERAM-Bot-0067 ENSBTAP00000008424.5 Bos taurus 56 0.0 744
WERAM-Tut-0023 ENSTTRP00000001873.1 Tursiops truncatus 56 0.0 736
WERAM-Pes-0132 ENSPSIP00000015657.1 Pelodiscus sinensis 56 0.0 729
WERAM-Dio-0055 ENSDORP00000005088.1 Dipodomys ordii 56 0.0 724
WERAM-Prc-0074 ENSPCAP00000006707.1 Procavia capensis 55 0.0 721
WERAM-Fec-0043 ENSFCAP00000003461.2 Felis catus 56 0.0 709
WERAM-Mup-0087 ENSMPUP00000008211.1 Mustela putorius furo 56 0.0 708
WERAM-Mae-0121 ENSMEUP00000012357.1 Macropus eugenii 55 0.0 707
WERAM-Caj-0110 ENSCJAP00000019522.1 Callithrix jacchus 52 0.0 707
WERAM-Dan-0038 ENSDNOP00000003891.2 Dasypus novemcinctus 55 0.0 689
WERAM-Lac-0052 ENSLACP00000007218.1 Latimeria chalumnae 45 2e-179 626
WERAM-Eqc-0070 ENSECAP00000008770.1 Equus caballus 50 1e-169 594
WERAM-Ere-0105 ENSEEUP00000011509.1 Erinaceus europaeus 52 1e-157 554
WERAM-Sah-0050 ENSSHAP00000005569.1 Sarcophilus harrisii 54 8e-157 551
WERAM-Mim-0028 ENSMICP00000002763.1 Microcebus murinus 67 2e-133 474
WERAM-Pat-0093 ENSPTRP00000048454.2 Pan troglodytes 68 5e-130 462
WERAM-Fia-0157 ENSFALP00000013428.1 Ficedula albicollis 44 2e-86 318
WERAM-Poa-0007 ENSPPYP00000001169.2 Pongo abelii 40 3e-82 304
WERAM-Mod-0002 ENSMODP00000000527.3 Monodelphis domestica 40 4e-82 303
WERAM-Leo-0095 ENSLOCP00000012853.1 Lepisosteus oculatus 42 3e-80 297
WERAM-Pof-0128 ENSPFOP00000011263.2 Poecilia formosa 39 5e-80 296
WERAM-Orn-0202 ENSONIP00000021047.1 Oreochromis niloticus 40 1e-79 295
WERAM-Tar-0059 ENSTRUP00000012635.1 Takifugu rubripes 38 1e-78 291
WERAM-Gam-0174 ENSGMOP00000017205.1 Gadus morhua 39 1e-78 291
WERAM-Xim-0046 ENSXMAP00000004390.1 Xiphophorus maculatus 38 1e-78 291
WERAM-Dar-0038 ENSDARP00000025140.8 Danio rerio 38 5e-78 290
WERAM-Gaa-0050 ENSGACP00000006576.1 Gasterosteus aculeatus 38 2e-77 287
WERAM-Orla-0118 ENSORLP00000014098.1 Oryzias latipes 41 2e-76 284
WERAM-Asm-0192 ENSAMXP00000018335.1 Astyanax mexicanus 38 6e-76 283
WERAM-Tag-0149 ENSTGUP00000012648.1 Taeniopygia guttata 37 7e-76 282
WERAM-Gaga-0021 ENSGALP00000003066.4 Gallus gallus 40 2e-72 271
WERAM-Anp-0085 ENSAPLP00000010241.1 Anas platyrhynchos 40 3e-72 270
WERAM-Tas-0025 ENSTSYP00000002916.1 Tarsius syrichta 40 1e-71 268
WERAM-Sus-0170 ENSSSCP00000021501.1 Sus scrofa 40 3e-70 264
WERAM-Ten-0081 ENSTNIP00000009576.1 Tetraodon nigroviridis 37 7e-70 262
WERAM-Chh-0017 ENSCHOP00000001525.1 Choloepus hoffmanni 43 3e-69 260
WERAM-Vip-0082 ENSVPAP00000007497.1 Vicugna pacos 40 1e-68 258
WERAM-Meg-0128 ENSMGAP00000013880.2 Meleagris gallopavo 38 2e-67 254
WERAM-Tub-0017 ENSTBEP00000001699.1 Tupaia belangeri 38 1e-65 248
WERAM-Ect-0131 ENSETEP00000014815.1 Echinops telfairi 41 2e-62 238
WERAM-Drm-0020 FBpp0083320 Drosophila melanogaster 32 3e-45 181
WERAM-Ora-0046 ENSOANP00000007156.1 Ornithorhynchus anatinus 37 1e-44 179
WERAM-Soa-0013 ENSSARP00000001458.1 Sorex araneus 65 4e-44 177
WERAM-Cii-0027 ENSCINP00000010542.3 Ciona intestinalis 29 2e-33 141
Created Date 25-Jun-2016