WERAM Information

Tag Content
WERAM ID WERAM-Sus-0127
Ensembl Protein ID ENSSSCP00000018183.2
Gene Name CBX4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000017160.2 ENSSSCT00000018684.2 ENSSSCP00000018183.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Chromodomain 2.80e-23 82.1 11 68
Organism Sus scrofa
Domain Profile
  Me_Reader Chromodomain
      Chromodomain.txt  1 FeverivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefekkkekkkkqg 59
                          F+ve+i  kk++rkg+veYlV+W+G++++++tWepeen+l+++ll +f++++++++++g
  ENSSSCP00000018183.2 11 FAVESIE-KKRIRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLLIAFQNRERQEQLMG 68
                          99*****.***********************************************9987 PP
Protein Sequence
(Fasta)		MELPAVGEHV FAVESIEKKR IRKGRVEYLV KWRGWSPKYN TWEPEENILD PRLLIAFQNR 60
ERQEQLMGYR KRGPKPKPLV VQVPTFARRS NVLTGLQDSS ADNRAKLELG SQGKGQGHQY 120
ELNSKKHHQY QPHSKERAGK PPPPGKSGKY YYQLNSKKHH PYQPDPKMYD LQYQGGHKEA 180
PSPTCPDLGA KSHPSDKWAH GGGAKGYLGA VKPLAGAAGA PGKGPEKGPP NGMTPAPKEA 240
VTGNGIGGKM KIVKNKNKNG RIVIVMSKYM ENGMQAVKIK SGEAAEGEAR SPSHKKRAAE 300
ERHPPAERTF KKAAGAEEKK TEAPSKRREE EAPGAGDPQP QEAGSRKLSP TKEAFGDQPL 360
QLTTKPDLLA WDPARSTHPP SHHHHHHHHH HAVDLNLSHA RKRCLSETHG EREPCKKRLT 420
ARSISTPTCL GGSPAAERPA DVPPAAVLPQ PEVILLDSDL DEPIDLRCVK TRGEAGEPPS 480
TLQVKPEAPA TPAVAAAPAT AAEKPPAEAQ DEPEEPLSEF KPFFGNIIIT DVTANCLTVT 540
FKEYVTV 547
Nucleotide Sequence
(Fasta)		GAGGCCCCGC CCGCTGACGT CCGGATTTGC ATGAGTTCTT GTGCAGCCGC GGCCCGGGCT 60
CAGTTGTCTG AGCGAGTGCG AGCCGGGAGC GGGGCAGGCG CGGGCAGCGG CGGGCGGCCG 120
GGTTGTGCTG GGCGAGCGGC GGCGGCGGCG GCGGCGCGGG CGGCGGGGGC GCCTCGGCCG 180
GGGCGGCAGC GGGGCGCCGG CGGGAGCCAG CAGCGTCTGC AGCCGCGCTG GCCGCCCGCG 240
CCCCGGCGCG CTCCGGCTCG GCCATGGAGC TGCCAGCTGT TGGCGAGCAC GTCTTCGCGG 300
TGGAGAGCAT CGAGAAGAAG CGGATCCGCA AGGGCAGAGT GGAGTATCTG GTGAAATGGA 360
GAGGCTGGTC CCCCAAATAT AACACGTGGG AACCCGAGGA GAACATCCTG GATCCCCGGC 420
TGCTCATCGC CTTCCAGAAC AGGGAACGGC AGGAGCAGCT AATGGGATAT CGGAAGAGAG 480
GGCCGAAGCC CAAACCGCTG GTGGTGCAGG TACCTACCTT TGCGCGTCGT TCCAATGTGC 540
TGACGGGACT CCAGGATTCC TCTGCAGACA ACCGCGCCAA GCTGGAGCTG GGCAGTCAGG 600
GCAAGGGCCA GGGGCACCAG TACGAGCTCA ACAGCAAGAA GCATCACCAG TACCAGCCGC 660
ACAGCAAAGA GCGGGCAGGC AAGCCCCCAC CACCTGGCAA AAGCGGCAAA TACTACTACC 720
AGCTCAACAG CAAGAAGCAC CACCCCTACC AGCCTGACCC CAAAATGTAT GACCTGCAGT 780
ACCAGGGCGG CCACAAGGAG GCGCCCAGCC CCACCTGCCC GGACCTAGGC GCCAAGAGCC 840
ACCCGTCCGA TAAGTGGGCC CACGGCGGGG GGGCCAAGGG CTACCTGGGA GCTGTCAAGC 900
CCCTGGCTGG TGCGGCCGGG GCACCAGGCA AGGGCCCTGA GAAGGGTCCC CCCAATGGGA 960
TGACGCCGGC CCCCAAAGAG GCGGTGACGG GCAACGGTAT TGGGGGCAAG ATGAAGATCG 1020
TCAAGAACAA GAACAAGAAT GGGCGCATCG TGATCGTAAT GAGCAAGTAC ATGGAGAACG 1080
GCATGCAGGC CGTGAAGATC AAATCCGGTG AGGCGGCGGA GGGCGAGGCG CGCTCCCCCA 1140
GCCACAAGAA ACGGGCTGCC GAGGAGCGTC ACCCTCCCGC CGAAAGGACT TTCAAAAAGG 1200
CCGCGGGGGC AGAGGAGAAG AAGACCGAAG CGCCCTCCAA GAGGAGGGAG GAGGAGGCGC 1260
CGGGGGCCGG GGACCCGCAG CCCCAGGAGG CCGGCTCCCG CAAGCTCTCC CCGACCAAGG 1320
AGGCCTTCGG CGACCAGCCC CTACAGCTCA CCACCAAGCC CGACCTGCTG GCCTGGGACC 1380
CGGCCCGCAG CACACACCCG CCCTCCCATC ACCACCACCA TCACCATCAC CACCACGCCG 1440
TCGATCTGAA TCTCTCCCAC GCGCGTAAGC GCTGCCTCTC GGAGACACAC GGCGAGCGAG 1500
AGCCCTGCAA GAAGCGCCTT ACTGCGCGCA GCATCAGCAC CCCCACCTGC CTGGGGGGCA 1560
GCCCAGCTGC CGAGCGCCCC GCAGACGTGC CCCCAGCCGC CGTCCTCCCG CAGCCGGAGG 1620
TCATCCTGCT GGACTCAGAC CTGGACGAGC CCATAGACTT GCGCTGCGTC AAGACGCGCG 1680
GCGAGGCCGG GGAGCCGCCC AGCACCCTCC AAGTGAAGCC TGAGGCCCCC GCGACCCCTG 1740
CAGTGGCAGC TGCGCCGGCA ACAGCGGCAG AAAAGCCTCC GGCTGAGGCC CAGGACGAGC 1800
CCGAGGAGCC ACTGAGCGAG TTCAAGCCCT TCTTTGGGAA TATAATTATC ACCGACGTCA 1860
CCGCGAACTG CCTCACCGTC ACGTTCAAAG AATACGTGAC GGTGTAGCGA AAGGGCCTCG 1920
AAAGGGAAAG CGCCGAACCC GCCAGGGCTT AGCACCTGGG GCCTGGGGGC GGACTCCTCC 1980
TCTCTCCAAC TGCGAGAGTT CCCGGCCCGG CCCCAGCGCG AAAACGCCGG AAGCCGCGGC 2040
AACCGCGTCC CTCCGTCGGG TCCCGGCTGG GGCGCCCGGC CGGCGCTGGC ACCGTCCACG 2100
CCGTGCCTGC GGGTCTCGCC CACCCATCTG CCCCCATCCC CTCTCTCGTG GACCTCCGGG 2160
ACTGACAGGG CAGCCACTTG CAGAGGTCTC AGAGTTATAG TATTATATTT TAACCGTGCT 2220
AACTTGTCAA GTGCAGACTT TACTCCCGTT TGTACGTGGT GTTATTATTG AAATGTATTG 2280
TTTGAGCTCA AAAGGCCCAC CAACCCCTTC GGGCTGATAT ATATATATTT ATTTGTAGGT 2340
ATTTATATAT TGAAATATAA AAACCTAGAT TTATGGAGTT TCCTCTAGAT CATGTTATAT 2400
TCTATATCAA ACAAACTATT TTCTGTTGAC CTTTCTACCC GTTCATTCAG TATTTCGGTT 2460
TATTTCATTT CTTCTCCTTC CAGGAACTGC AATACCAGTA ACCTTGGTAT ATATTTTTTG 2520
ATACTGTACA CATGGATGTG TTGTTTCTAT GTGCAAAAAA AAAAAAAAAA GTTTGTTAAA 2580
AGGCTAAACG AGCTCTCTAG AAACTGCTGC TACTAGAAAT GTCTAAACTA TAAGCTTCCA 2640
ATTATTACCT GCTTGAATGT AAATATTAAA TGGAGATGTT GAAGGTGCAT TTTCGCTGTT 2700
TGAGATTAGC 2711
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Otg-0228 ENSOGAP00000015725.1 Otolemur garnettii 93 0.0 856
WERAM-Chs-0027 ENSCSAP00000015691.1 Chlorocebus sabaeus 91 0.0 833
WERAM-Ict-0199 ENSSTOP00000021274.1 Ictidomys tridecemlineatus 90 0.0 832
WERAM-Pat-0211 ENSPTRP00000060551.1 Pan troglodytes 90 0.0 832
WERAM-Hos-0137 ENSP00000269397.4 Homo sapiens 90 0.0 832
WERAM-Paa-0138 ENSPANP00000016273.1 Papio anubis 90 0.0 831
WERAM-Mum-0165 ENSMUSP00000026665.7 Mus musculus 89 0.0 822
WERAM-Gog-0105 ENSGGOP00000009074.2 Gorilla gorilla 85 0.0 768
WERAM-Bot-0095 ENSBTAP00000040225.3 Bos taurus 77 1e-171 600
WERAM-Lac-0174 ENSLACP00000020449.1 Latimeria chalumnae 50 2e-119 427
WERAM-Ran-0197 ENSRNOP00000066624.1 Rattus norvegicus 97 5e-109 392
WERAM-Orla-0019 ENSORLP00000002324.1 Oryzias latipes 45 2e-92 337
WERAM-Xet-0083 ENSXETP00000028020.2 Xenopus tropicalis 56 5e-91 332
WERAM-Asm-0047 ENSAMXP00000006389.1 Astyanax mexicanus 43 1e-88 324
WERAM-Gam-0115 ENSGMOP00000012079.1 Gadus morhua 41 6e-88 322
WERAM-Gaa-0195 ENSGACP00000024086.1 Gasterosteus aculeatus 42 4e-86 316
WERAM-Xim-0012 ENSXMAP00000001412.1 Xiphophorus maculatus 39 5e-86 315
WERAM-Orn-0039 ENSONIP00000004213.1 Oreochromis niloticus 41 3e-85 313
WERAM-Pof-0200 ENSPFOP00000016491.2 Poecilia formosa 41 1e-84 311
WERAM-Ten-0209 ENSTNIP00000021158.1 Tetraodon nigroviridis 41 9e-78 288
WERAM-Tar-0020 ENSTRUP00000004308.1 Takifugu rubripes 39 2e-77 287
WERAM-Dar-0204 ENSDARP00000132706.1 Danio rerio 41 3e-77 286
WERAM-Leo-0140 ENSLOCP00000017081.1 Lepisosteus oculatus 74 1e-66 251
WERAM-Anc-0080 ENSACAP00000007637.2 Anolis carolinensis 71 2e-30 131
WERAM-Aim-0120 ENSAMEP00000011388.1 Ailuropoda melanoleuca 70 3e-30 130
WERAM-Pes-0116 ENSPSIP00000013945.1 Pelodiscus sinensis 70 3e-30 130
WERAM-Dan-0191 ENSDNOP00000026605.1 Dasypus novemcinctus 70 4e-30 130
WERAM-Fec-0174 ENSFCAP00000024437.1 Felis catus 70 4e-30 130
WERAM-Dio-0093 ENSDORP00000009462.1 Dipodomys ordii 70 4e-30 130
WERAM-Mup-0151 ENSMPUP00000013148.1 Mustela putorius furo 70 4e-30 130
WERAM-Tut-0014 ENSTTRP00000001188.1 Tursiops truncatus 70 5e-30 130
WERAM-Caf-0017 ENSCAFP00000001948.3 Canis familiaris 70 5e-30 129
WERAM-Mam-0061 ENSMMUP00000010301.2 Macaca mulatta 70 7e-30 129
WERAM-Ova-0175 ENSOARP00000017609.1 Ovis aries 70 1e-29 128
WERAM-Gaga-0164 ENSGALP00000037077.2 Gallus gallus 68 9e-29 125
WERAM-Loa-0080 ENSLAFP00000006257.4 Loxodonta africana 52 1e-28 125
WERAM-Poa-0210 ENSPPYP00000024136.1 Pongo abelii 52 1e-28 125
WERAM-Ect-0084 ENSETEP00000009565.1 Echinops telfairi 52 1e-28 125
WERAM-Eqc-0159 ENSECAP00000016784.1 Equus caballus 52 1e-28 125
WERAM-Cap-0201 ENSCPOP00000016560.1 Cavia porcellus 52 1e-28 125
WERAM-Caj-0191 ENSCJAP00000032804.1 Callithrix jacchus 52 1e-28 125
WERAM-Tub-0039 ENSTBEP00000004995.1 Tupaia belangeri 68 2e-28 124
WERAM-Nol-0003 ENSNLEP00000000196.1 Nomascus leucogenys 51 2e-28 124
WERAM-Prc-0153 ENSPCAP00000014543.1 Procavia capensis 68 4e-28 124
WERAM-Myl-0216 ENSMLUP00000018435.1 Myotis lucifugus 68 4e-28 123
WERAM-Mod-0074 ENSMODP00000011965.2 Monodelphis domestica 67 5e-28 123
WERAM-Sah-0110 ENSSHAP00000011795.1 Sarcophilus harrisii 57 6e-28 123
WERAM-Ptv-0108 ENSPVAP00000009576.2 Pteropus vampyrus 48 1e-26 118
WERAM-Tag-0129 ENSTGUP00000010594.1 Taeniopygia guttata 67 2e-23 108
WERAM-Ere-0050 ENSEEUP00000004312.1 Erinaceus europaeus 69 8e-23 105
WERAM-Ora-0048 ENSOANP00000007669.2 Ornithorhynchus anatinus 66 2e-18 91.3
WERAM-Zem-0068 GRMZM2G117100_P01 Zea mays 45 3e-12 70.9
WERAM-Sei-0132 Si036395m Setaria italica 53 6e-10 63.5
WERAM-Orc-0018 ENSOCUP00000002132.2 Oryctolagus cuniculus 46 9e-09 59.3
WERAM-Chh-0115 ENSCHOP00000012258.1 Choloepus hoffmanni 46 9e-09 59.3
WERAM-Vip-0106 ENSVPAP00000009695.1 Vicugna pacos 46 1e-08 59.3
WERAM-Mim-0066 ENSMICP00000006372.1 Microcebus murinus 46 1e-08 59.3
WERAM-Soa-0076 ENSSARP00000007237.1 Sorex araneus 46 1e-08 59.3
Created Date 25-Jun-2016