| Tag |
Content |
| WERAM ID |
WERAM-Sus-0038 |
| Ensembl Protein ID |
ENSSSCP00000006140.2 |
| Gene Name |
GTF3C4 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HAT |
HAT_other |
0 |
1558 |
|
|
|
| Organism |
Sus scrofa |
| Domain Profile |
HAT HAT_other
Query: 1 MNTADKARVXXX----XXXXXXXXXXXXXXXXXXXXXDPAPGPSAAFRLLVTRREPAVRL 56
MNTAD+ARV D APGPSAAFRL+VTRREPAV+L
Sbjct: 1 MNTADQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKL 60
Query: 57 QYAVSGLEPLAWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHRTSVPAPLNSCLLKV 116
QYAVSGLEPLAWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHRTSVPAPLNSCLLKV
Sbjct: 61 QYAVSGLEPLAWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHRTSVPAPLNSCLLKV 120
Query: 117 GSKTEVAECKEKFATSKDPTISQTFMLDRVFNPEGKALPPLRGFKYTSWSPMGCDANGRC 176
GSKTEVAECKEKFA SKDPT+SQTFMLDRVFNPEGKALPP+RGFKYTSWSPMGCDANGRC
Sbjct: 121 GSKTEVAECKEKFAASKDPTVSQTFMLDRVFNPEGKALPPMRGFKYTSWSPMGCDANGRC 180
Query: 177 LLAALTMDNRLTVQANLNRLQWVQLADLTEIYGERLYETSYRFSKSEAPQGSLGDFAEFQ 236
LLAALTMDNRLT+QANLNRLQWVQL DLTEIYGERLYETSYR SK+EAP+G+LGDFAEFQ
Sbjct: 181 LLAALTMDNRLTIQANLNRLQWVQLVDLTEIYGERLYETSYRLSKNEAPEGNLGDFAEFQ 240
Query: 237 RRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIAVWQFQLPFVGKESI 296
RRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIAVWQFQLPFVGKESI
Sbjct: 241 RRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIAVWQFQLPFVGKESI 300
Query: 297 SSCNTIESGITSPSVLFWWEYEHSNRKMSGLIVGSAFGPVKILPVNLKAVKGYFTLRQPV 356
SSCNTIESGITSPSVLFWWEYEH+NRKMSGLIVGSAFGP+KILPVNLKAVKGYFTLRQPV
Sbjct: 301 SSCNTIESGITSPSVLFWWEYEHNNRKMSGLIVGSAFGPIKILPVNLKAVKGYFTLRQPV 360
Query: 357 VLWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTG 416
+LWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTG
Sbjct: 361 ILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTG 420
Query: 417 LHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLIKLADVFGSVRTHGI 476
LHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLIKL+DVFGSVRTHGI
Sbjct: 421 LHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLIKLSDVFGSVRTHGI 480
Query: 477 AVSPCGAYLAVITTEGMVNGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLI 536
AVSPCGAYLA+ITTEGM+NGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLI
Sbjct: 481 AVSPCGAYLAIITTEGMINGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLI 540
Query: 537 DLVRWKILKDKHIPQFLQEALEKKMESSGATYYWRFKLFLLRILYQSMQKTP-EALWKPT 595
DLVRWKILKDKHIPQFLQEALEKK+ESSG TY+WRFKLFLLRILYQSMQKTP EALWKPT
Sbjct: 541 DLVRWKILKDKHIPQFLQEALEKKIESSGVTYFWRFKLFLLRILYQSMQKTPSEALWKPT 600
Query: 596 HEDSKILLVDSPGMGNAEDEQQDEGTSSKPVNKPGLQERSKEGXXXXXXXXXXXSPTQAG 655
HEDSKILLVDSPGMGNA+DEQQ+EGTSSK V K GLQERSKEG PT G
Sbjct: 601 HEDSKILLVDSPGMGNADDEQQEEGTSSKQVVKQGLQERSKEGDVEEPTDDSL--PT-TG 657
Query: 656 DTGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLM 715
D GGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLM
Sbjct: 658 DAGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLM 717
Query: 716 SDEEYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRCFLTY 775
SDEEYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRCFLTY
Sbjct: 718 SDEEYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRCFLTY 777
Query: 776 QSCQSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF 820
QSCQSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF
Sbjct: 778 QSCQSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF 822
|
Protein Sequence
(Fasta) | MNTADKARVG PAADRPAPPE EEEGEAGGKG PVADPAPGPS AAFRLLVTRR EPAVRLQYAV 60
SGLEPLAWSE DHRVSVSTAR SIAVLELICD VHNPGQDLVI HRTSVPAPLN SCLLKVGSKT 120
EVAECKEKFA TSKDPTISQT FMLDRVFNPE GKALPPLRGF KYTSWSPMGC DANGRCLLAA 180
LTMDNRLTVQ ANLNRLQWVQ LADLTEIYGE RLYETSYRFS KSEAPQGSLG DFAEFQRRHS 240
MQTPVRMEWS GICTTQQVKH NNECRDVGSV LLAVLFENGN IAVWQFQLPF VGKESISSCN 300
TIESGITSPS VLFWWEYEHS NRKMSGLIVG SAFGPVKILP VNLKAVKGYF TLRQPVVLWK 360
EMDQLPVHSI KCVPLYHPYQ KCSCSLVVAA RGSYVFWCLL LISKAGLNVH NSHVTGLHSL 420
PIVSMTADKQ NGTVYTCSSD GKVRQLIPIF TDVALKFEHQ LIKLADVFGS VRTHGIAVSP 480
CGAYLAVITT EGMVNGLHPV NKNYQVQFVT LKTFEEAAAQ LLESSVQNLF KQVDLIDLVR 540
WKILKDKHIP QFLQEALEKK MESSGATYYW RFKLFLLRIL YQSMQKTPEA LWKPTHEDSK 600
ILLVDSPGMG NAEDEQQDEG TSSKPVNKPG LQERSKEGDA EDAAAAAAES PTQAGDTGGR 660
EPMEEKLLEI QGKIEAVEMH LTREHMKRVL GEVYLHTWIT ENTSIPTRGL CNFLMSDEEY 720
DDRTARVLIG HISKKMNKQT FPEHCSLCKE ILPFTDRKQA VCSNGHIWLR CFLTYQSCQS 780
LIYRRCLLHD SIARHPAPED PDWIKRLLQS PCPFCDSPVF Protein Fasta Sequence
>ENSSSCP00000006140.2|HAT_other|Sus scrofa
MNTADKARVGPAADRPAPPEEEEGEAGGKGPVADPAPGPSAAFRLLVTRREPAVRLQYAVSGLEPLAWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHRTSVPAPLNSCLLKVGSKTEVAECKEKFATSKDPTISQTFMLDRVFNPEGKALPPLRGFKYTSWSPMGCDANGRCLLAALTMDNRLTVQANLNRLQWVQLADLTEIYGERLYETSYRFSKSEAPQGSLGDFAEFQRRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIAVWQFQLPFVGKESISSCNTIESGITSPSVLFWWEYEHSNRKMSGLIVGSAFGPVKILPVNLKAVKGYFTLRQPVVLWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLIKLADVFGSVRTHGIAVSPCGAYLAVITTEGMVNGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLIDLVRWKILKDKHIPQFLQEALEKKMESSGATYYWRFKLFLLRILYQSMQKTPEALWKPTHEDSKILLVDSPGMGNAEDEQQDEGTSSKPVNKPGLQERSKEGDAEDAAAAAAESPTQAGDTGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLMSDEEYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRCFLTYQSCQSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF |
Nucleotide Sequence
(Fasta) | CTCCGGGCCT AAGGGGAAGA AAACCGCCGC GGAGGGCGCT GGGGGCCGGC GGCCGCGGTG 60
CAAGAGGCGG CAACCGGACG GCGACGCGGA GTTGGCGCGC CCGGGGTCCG GCTTCAGCCT 120
CTGAGGGGAG ATGAATACGG CCGACAAGGC CCGGGTGGGG CCCGCGGCCG ACCGGCCTGC 180
GCCGCCCGAG GAAGAAGAGG GCGAGGCGGG CGGGAAGGGG CCGGTGGCGG ACCCGGCCCC 240
CGGGCCCAGC GCCGCGTTCC GCCTCCTGGT GACTCGGCGG GAGCCGGCCG TGAGGCTGCA 300
GTATGCGGTG AGCGGCCTGG AGCCGCTGGC GTGGTCCGAG GACCACCGCG TGTCGGTGTC 360
CACCGCCCGT AGCATCGCTG TGCTGGAGCT CATCTGCGAC GTGCACAACC CGGGCCAGGA 420
CCTGGTTATC CACCGCACCT CCGTGCCCGC GCCTCTCAAC AGCTGCCTCC TCAAAGTTGG 480
CTCAAAAACA GAAGTTGCTG AGTGCAAGGA GAAATTTGCC ACCTCTAAGG ACCCCACAAT 540
CAGTCAGACG TTCATGCTGG ATAGGGTGTT CAACCCTGAG GGGAAGGCTC TGCCCCCGCT 600
GAGAGGGTTC AAGTACACCA GCTGGTCCCC CATGGGTTGT GACGCGAACG GCAGGTGCCT 660
CTTGGCAGCA CTGACCATGG ACAACCGCCT GACCGTCCAG GCCAACCTCA ACAGACTGCA 720
GTGGGTCCAG CTGGCCGACC TGACGGAGAT TTACGGGGAA CGCCTTTACG AGACCAGTTA 780
CAGGTTCTCT AAAAGTGAGG CCCCGCAGGG GAGCCTCGGC GATTTTGCTG AGTTTCAGAG 840
GAGGCACAGC ATGCAGACCC CCGTCAGGAT GGAGTGGTCG GGCATCTGCA CCACGCAGCA 900
GGTCAAGCAC AACAACGAGT GCCGCGACGT GGGCAGCGTG CTCCTGGCAG TCCTCTTCGA 960
AAACGGCAAC ATCGCCGTGT GGCAGTTCCA GCTCCCGTTT GTAGGAAAGG AGTCTATCTC 1020
TTCGTGCAAC ACGATTGAGT CAGGAATCAC CTCTCCTAGC GTTTTGTTTT GGTGGGAGTA 1080
CGAGCACAGC AACCGGAAAA TGAGCGGCCT TATTGTGGGG AGTGCTTTCG GACCTGTAAA 1140
AATTCTTCCC GTCAACCTCA AAGCCGTCAA GGGCTACTTC ACCTTGAGGC AGCCCGTCGT 1200
CTTGTGGAAG GAAATGGACC AGCTGCCGGT TCACAGCATC AAGTGCGTGC CGCTCTATCA 1260
CCCCTACCAG AAGTGTAGCT GTAGCCTCGT GGTGGCCGCG AGAGGATCCT ACGTGTTTTG 1320
GTGTCTTCTT CTCATCTCCA AAGCGGGTCT GAATGTTCAC AATTCCCACG TCACAGGCCT 1380
CCACTCGCTG CCCATCGTCT CCATGACGGC GGACAAGCAG AACGGGACGG TCTACACCTG 1440
CTCCAGTGAC GGGAAGGTGC GGCAGCTGAT TCCCATCTTC ACGGACGTGG CCTTGAAGTT 1500
CGAACACCAG CTGATTAAGC TGGCGGACGT ATTCGGCTCC GTGAGGACAC ACGGGATCGC 1560
AGTGAGCCCC TGCGGCGCGT ACCTGGCCGT CATTACAACG GAGGGCATGG TCAACGGCCT 1620
CCACCCCGTG AACAAAAACT ACCAGGTTCA GTTCGTGACC CTCAAAACCT TTGAGGAGGC 1680
AGCGGCTCAG CTTCTGGAAT CTTCAGTTCA GAATCTCTTT AAGCAGGTTG ATTTAATAGA 1740
CCTGGTGCGC TGGAAGATTT TAAAAGATAA ACACATCCCG CAGTTTTTAC AAGAGGCTTT 1800
GGAAAAAAAG ATGGAAAGCA GCGGGGCCAC CTATTATTGG CGTTTCAAAC TCTTCCTCCT 1860
GAGGATTTTG TATCAGTCGA TGCAGAAAAC TCCAGAAGCC TTATGGAAAC CCACCCACGA 1920
GGACTCGAAA ATCTTACTCG TTGACTCACC TGGGATGGGC AACGCCGAGG ACGAACAGCA 1980
AGACGAAGGC ACGTCCTCCA AACCGGTGAA CAAGCCAGGC CTCCAGGAGC GGAGCAAAGA 2040
AGGAGACGCA GAGGACGCGG CGGCGGCGGC GGCGGAGTCG CCCACTCAGG CCGGGGACAC 2100
CGGAGGCCGC GAGCCCATGG AGGAGAAGCT CCTCGAGATC CAAGGGAAGA TCGAAGCTGT 2160
GGAAATGCAC CTGACCCGGG AGCACATGAA GCGCGTCCTG GGCGAAGTCT ACCTGCACAC 2220
CTGGATCACA GAAAACACTA GCATCCCCAC CAGGGGACTC TGCAACTTCT TAATGTCGGA 2280
TGAAGAGTAC GACGACCGGA CAGCCCGGGT GCTCATCGGA CACATCTCCA AGAAGATGAA 2340
CAAGCAGACG TTCCCTGAGC ACTGCAGCTT GTGTAAAGAG ATCCTGCCCT TCACAGATCG 2400
CAAGCAGGCC GTCTGCTCCA ATGGCCACAT TTGGCTCCGG TGCTTTTTAA CCTACCAGTC 2460
CTGCCAGAGT TTGATATACA GAAGGTGTTT GCTCCATGAC AGCATTGCCC GCCACCCAGC 2520
TCCAGAAGAT CCTGACTGGA TTAAGAGGTT ACTGCAAAGC CCCTGCCCCT TCTGCGATTC 2580
TCCTGTCTTC TGA
2594Nucleotide Fasta Sequence
>ENSSSCP00000006140.2|HAT_other|Sus scrofa
CTCCGGGCCTAAGGGGAAGAAAACCGCCGCGGAGGGCGCTGGGGGCCGGCGGCCGCGGTGCAAGAGGCGGCAACCGGACGGCGACGCGGAGTTGGCGCGCCCGGGGTCCGGCTTCAGCCTCTGAGGGGAGATGAATACGGCCGACAAGGCCCGGGTGGGGCCCGCGGCCGACCGGCCTGCGCCGCCCGAGGAAGAAGAGGGCGAGGCGGGCGGGAAGGGGCCGGTGGCGGACCCGGCCCCCGGGCCCAGCGCCGCGTTCCGCCTCCTGGTGACTCGGCGGGAGCCGGCCGTGAGGCTGCAGTATGCGGTGAGCGGCCTGGAGCCGCTGGCGTGGTCCGAGGACCACCGCGTGTCGGTGTCCACCGCCCGTAGCATCGCTGTGCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCCGTGCCCGCGCCTCTCAACAGCTGCCTCCTCAAAGTTGGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTTGCCACCTCTAAGGACCCCACAATCAGTCAGACGTTCATGCTGGATAGGGTGTTCAACCCTGAGGGGAAGGCTCTGCCCCCGCTGAGAGGGTTCAAGTACACCAGCTGGTCCCCCATGGGTTGTGACGCGAACGGCAGGTGCCTCTTGGCAGCACTGACCATGGACAACCGCCTGACCGTCCAGGCCAACCTCAACAGACTGCAGTGGGTCCAGCTGGCCGACCTGACGGAGATTTACGGGGAACGCCTTTACGAGACCAGTTACAGGTTCTCTAAAAGTGAGGCCCCGCAGGGGAGCCTCGGCGATTTTGCTGAGTTTCAGAGGAGGCACAGCATGCAGACCCCCGTCAGGATGGAGTGGTCGGGCATCTGCACCACGCAGCAGGTCAAGCACAACAACGAGTGCCGCGACGTGGGCAGCGTGCTCCTGGCAGTCCTCTTCGAAAACGGCAACATCGCCGTGTGGCAGTTCCAGCTCCCGTTTGTAGGAAAGGAGTCTATCTCTTCGTGCAACACGATTGAGTCAGGAATCACCTCTCCTAGCGTTTTGTTTTGGTGGGAGTACGAGCACAGCAACCGGAAAATGAGCGGCCTTATTGTGGGGAGTGCTTTCGGACCTGTAAAAATTCTTCCCGTCAACCTCAAAGCCGTCAAGGGCTACTTCACCTTGAGGCAGCCCGTCGTCTTGTGGAAGGAAATGGACCAGCTGCCGGTTCACAGCATCAAGTGCGTGCCGCTCTATCACCCCTACCAGAAGTGTAGCTGTAGCCTCGTGGTGGCCGCGAGAGGATCCTACGTGTTTTGGTGTCTTCTTCTCATCTCCAAAGCGGGTCTGAATGTTCACAATTCCCACGTCACAGGCCTCCACTCGCTGCCCATCGTCTCCATGACGGCGGACAAGCAGAACGGGACGGTCTACACCTGCTCCAGTGACGGGAAGGTGCGGCAGCTGATTCCCATCTTCACGGACGTGGCCTTGAAGTTCGAACACCAGCTGATTAAGCTGGCGGACGTATTCGGCTCCGTGAGGACACACGGGATCGCAGTGAGCCCCTGCGGCGCGTACCTGGCCGTCATTACAACGGAGGGCATGGTCAACGGCCTCCACCCCGTGAACAAAAACTACCAGGTTCAGTTCGTGACCCTCAAAACCTTTGAGGAGGCAGCGGCTCAGCTTCTGGAATCTTCAGTTCAGAATCTCTTTAAGCAGGTTGATTTAATAGACCTGGTGCGCTGGAAGATTTTAAAAGATAAACACATCCCGCAGTTTTTACAAGAGGCTTTGGAAAAAAAGATGGAAAGCAGCGGGGCCACCTATTATTGGCGTTTCAAACTCTTCCTCCTGAGGATTTTGTATCAGTCGATGCAGAAAACTCCAGAAGCCTTATGGAAACCCACCCACGAGGACTCGAAAATCTTACTCGTTGACTCACCTGGGATGGGCAACGCCGAGGACGAACAGCAAGACGAAGGCACGTCCTCCAAACCGGTGAACAAGCCAGGCCTCCAGGAGCGGAGCAAAGAAGGAGACGCAGAGGACGCGGCGGCGGCGGCGGCGGAGTCGCCCACTCAGGCCGGGGACACCGGAGGCCGCGAGCCCATGGAGGAGAAGCTCCTCGAGATCCAAGGGAAGATCGAAGCTGTGGAAATGCACCTGACCCGGGAGCACATGAAGCGCGTCCTGGGCGAAGTCTACCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCAGGGGACTCTGCAACTTCTTAATGTCGGATGAAGAGTACGACGACCGGACAGCCCGGGTGCTCATCGGACACATCTCCAAGAAGATGAACAAGCAGACGTTCCCTGAGCACTGCAGCTTGTGTAAAGAGATCCTGCCCTTCACAGATCGCAAGCAGGCCGTCTGCTCCAATGGCCACATTTGGCTCCGGTGCTTTTTAACCTACCAGTCCTGCCAGAGTTTGATATACAGAAGGTGTTTGCTCCATGACAGCATTGCCCGCCACCCAGCTCCAGAAGATCCTGACTGGATTAAGAGGTTACTGCAAAGCCCCTGCCCCTTCTGCGATTCTCCTGTCTTCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
