WERAM Information


Tag Content
WERAM ID WERAM-Gaa-0190
Ensembl Protein ID ENSGACP00000023972.1
Gene Name gtf3c4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGACG00000018142.1 ENSGACT00000024019.1 ENSGACP00000023972.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HAT HAT_other 0 852
Organism Gasterosteus aculeatus
Domain Profile
  HAT HAT_other

Query: 39  KRDPVVPLLAPVSGLQPLAWSQDHRLAVCTTSSVSMMELVCDVHSSQQELTLHRTCIPVP 98
+R+P V L VSGL+PLAWS+DHR++V T S++++EL+CDVH+ Q+L +HRT +P P
Sbjct: 53 RREPAVKLQYAVSGLEPLAWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHRTSVPAP 112
Query: 99 TEAPKLRVGPAAELAEAVGKFSSHPDPSVKQLFLADQVMNP---SMGPLKGIKYASWSPL 155
+ L+VG E+AE KF++ DP+V Q F+ D+V NP ++ P++G KY SWSP+
Sbjct: 113 LNSCLLKVGSKTEVAECKEKFAASKDPTVSQTFMLDRVFNPEGKALPPMRGFKYTSWSPM 172
Query: 156 GCDSSGRCLLACLTLDHRLTIHNSHKRLEWNTLVNLTKRYGARLKERGYSKKDNKPPQAD 215
GCD++GRCLLA LT+D+RLTI + RL+W LV+LT+ YG RL E Y N+ P+ +
Sbjct: 173 GCDANGRCLLAALTMDNRLTIQANLNRLQWVQLVDLTEIYGERLYETSYRLSKNEAPEGN 232
Query: 216 LQDFDELQRRFRMQTPLRMEWSSVYTTKQVQPDNSCKDTEMVLLAVLMENGDLVLWKFVL 275
L DF E QRR MQTP+RMEWS + TT+QV+ +N C+D VLLAVL ENG++ +W+F L
Sbjct: 233 LGDFAEFQRRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIAVWQFQL 292
Query: 276 PYLSEADVTFYDIVESGVSRPSDLAWWEYENGERRMSGLIIGSEAGPVKIVPVSLAGVKG 335
P++ + ++ + +ESG++ PS L WWEYE+ R+MSGLI+GS GP+KI+PV+L VKG
Sbjct: 293 PFVGKESISSCNTIESGITSPSVLFWWEYEHNNRKMSGLIVGSAFGPIKILPVNLKAVKG 352
Query: 336 YFTLRHPVILWKECDELAVENLKCVPMIHPIQKSSCSLIVASRGCYVFWCLLLISPAGLN 395
YFTLR PVILWKE D+L V ++KCVP+ HP QK SCSL+VA+RG YVFWCLLLIS AGLN
Sbjct: 353 YFTLRQPVILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLN 412
Query: 396 VHNSHVAGLHSLPVVSLAISQHGVAVYTCSLDGLMKKLTPTFTENTLIFKQEDLLQSESL 455
VHNSHV GLHSLP+VS+ + VYTCS DG +++L P FT+ L F+ + + S+
Sbjct: 413 VHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLIKLSDVF 472
Query: 456 SGRRIHGIAVSHNGAYCALASTPGMVGSHHPISRTYQVHFVALKTSEEAAALLLKSPAQN 515
R HGIAVS GAY A+ +T GM+ HP+++ YQV FV LKT EEAAA LL+S QN
Sbjct: 473 GSVRTHGIAVSPCGAYLAIITTEGMINGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQN 532
Query: 516 LYKTADLLDLVRWQVLKNKCIPAALLDEVDRKIQEVDSPYLWRFKLFLVRILYQSLQMPP 575
L+K DL+DLVRW++LK+K IP L + +++KI+ Y WRFKLFL+RILYQS+Q P
Sbjct: 533 LFKQVDLIDLVRWKILKDKHIPQFLQEALEKKIESSGVTYFWRFKLFLLRILYQSMQKTP 592
Query: 576 TDHHWKPTHEENKVLVHDAPLL----EVKQEEGNP------------------------- 606
++ WKPTHE++K+L+ D+P + + +QEEG
Sbjct: 593 SEALWKPTHEDSKILLVDSPGMGNADDEQQEEGTSSKQVVKQGLQERSKEGDVEEPTDDS 652
Query: 607 -------------EQQMEEVQAWINAVETHMMRENMKKVLGVVYLNTWITQNTSIPTCGL 653
E+++ E+Q I AVE H+ RE+MK+VLG VYL+TWIT+NTSIPT GL
Sbjct: 653 LPTTGDAGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGL 712
Query: 654 VEYLSRDG--NDRGSEVLIGHIKNKMNKQTFSERCSLCQAVLPFSDHKQAVCKNGHIWLR 711
+L D +DR + VLIGHI KMNKQTF E CSLC+ +LPF+D KQAVC NGHIWLR
Sbjct: 713 CNFLMSDEEYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLR 772
Query: 712 CVLSYQACQTLTFRRCLLLDTISRLPQPEDPEWIRKILQAPCTLCDSPMI 761
C L+YQ+CQ+L +RRCLL D+I+R P PEDP+WI+++LQ+PC CDSP+
Sbjct: 773 CFLTYQSCQSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF 822

Protein Sequence
(Fasta)
MAAASPPASA RTPTRNVVIK TEPEADEDLR ICPEEVPFKR DPVVPLLAPV SGLQPLAWSQ 60
DHRLAVCTTS SVSMMELVCD VHSSQQELTL HRTCIPVPTE APKLRVGPAA ELAEAVGKFS 120
SHPDPSVKQL FLADQVMNPS MGPLKGIKYA SWSPLGCDSS GRCLLACLTL DHRLTIHNSH 180
KRLEWNTLVN LTKRYGARLK ERGYSKKDNK PPQADLQDFD ELQRRFRMQT PLRMEWSSVY 240
TTKQVQPDNS CKDTEMVLLA VLMENGDLVL WKFVLPYLSE ADVTFYDIVE SGVSRPSDLA 300
WWEYENGERR MSGLIIGSEA GPVKIVPVSL AGVKGYFTLR HPVILWKECD ELAVENLKCV 360
PMIHPIQKSS CSLIVASRGC YVFWCLLLIS PAGLNVHNSH VAGLHSLPVV SLAISQHGVA 420
VYTCSLDGLM KKLTPTFTEN TLIFKQEDLL QSESLSGRRI HGIAVSHNGA YCALASTPGM 480
VGSHHPISRT YQVHFVALKT SEEAAALLLK SPAQNLYKTA DLLDLVRWQV LKNKCIPAAL 540
LDEVDRKIQE VDSPYLWRFK LFLVRILYQS LQMPPTDHHW KPTHEENKVL VHDAPLLEVK 600
QEEGNPEQQM EEVQAWINAV ETHMMRENMK KVLGVVYLNT WITQNTSIPT CGLVEYLSRD 660
GNDRGSEVLI GHIKNKMNKQ TFSERCSLCQ AVLPFSDHKQ AVCKNGHIWL RCVLSYQACQ 720
TLTFRRCLLL DTISRLPQPE DPEWIRKILQ APCTLCDSPM I 761
Nucleotide Sequence
(Fasta)
TTCCACCACA AGGGGAAAAC ATGGCTGCCG CCAGTCCGCC AGCTTCGGCG AGAACACCGA 60
CCAGAAATGT AGTCATTAAG ACCGAGCCAG AAGCCGACGA AGACCTGCGC ATTTGCCCGG 120
AAGAGGTCCC GTTTAAGCGG GACCCTGTCG TCCCGCTCCT GGCCCCGGTC AGCGGGCTGC 180
AGCCGCTCGC CTGGTCACAG GATCACCGCC TGGCTGTGTG CACCACCAGC TCCGTGTCGA 240
TGATGGAGCT GGTGTGCGAC GTCCACAGCA GCCAGCAGGA GCTGACGCTG CACAGGACCT 300
GCATCCCCGT CCCGACGGAG GCTCCCAAAC TGCGGGTGGG ACCGGCGGCG GAGCTAGCTG 360
AAGCAGTGGG GAAGTTCTCG TCCCACCCCG ACCCCTCGGT GAAACAACTC TTCCTGGCCG 420
ACCAGGTGAT GAACCCGTCA ATGGGGCCGC TCAAGGGAAT AAAATATGCC AGCTGGTCCC 480
CGTTGGGCTG CGACTCTAGC GGGCGCTGTC TGCTCGCCTG CCTCACCCTC GACCACCGGC 540
TCACCATCCA CAACAGCCAC AAGCGCCTGG AGTGGAACAC GCTGGTCAAC CTCACCAAAA 600
GGTACGGCGC CAGGCTAAAG GAGCGAGGCT ATTCCAAAAA GGACAACAAG CCCCCGCAGG 660
CCGACCTGCA GGACTTTGAC GAGCTGCAGC GGCGCTTCCG CATGCAGACG CCGTTGAGGA 720
TGGAGTGGTC GAGCGTTTAC ACAACCAAAC AGGTGCAGCC GGACAACTCG TGCAAAGACA 780
CGGAGATGGT CCTCCTCGCC GTCCTGATGG AAAACGGCGA CCTGGTCTTG TGGAAGTTCG 840
TACTGCCCTA CCTGAGCGAG GCGGACGTCA CGTTTTACGA CATCGTAGAG TCGGGCGTCA 900
GCAGACCCAG CGACCTGGCG TGGTGGGAGT ACGAGAACGG CGAGCGGCGG ATGAGCGGCC 960
TGATCATTGG TAGCGAGGCG GGGCCCGTCA AGATCGTGCC GGTCAGCCTG GCCGGAGTGA 1020
AGGGCTACTT CACCCTGCGG CACCCGGTCA TCCTCTGGAA GGAGTGCGAC GAGCTCGCCG 1080
TGGAGAACCT CAAGTGTGTC CCGATGATCC ACCCGATCCA GAAGTCCAGC TGCAGCCTCA 1140
TCGTGGCCTC GCGCGGCTGC TACGTCTTCT GGTGCCTGCT CCTGATTTCG CCGGCTGGAC 1200
TGAACGTGCA CAACTCCCAC GTGGCGGGCC TGCACTCGCT CCCGGTGGTC TCGCTGGCAA 1260
TCAGTCAGCA CGGCGTCGCG GTGTACACAT GCTCCCTCGA CGGCCTGATG AAGAAGCTGA 1320
CGCCCACGTT TACGGAGAAC ACGTTGATCT TCAAACAGGA GGACCTGCTG CAGTCCGAGA 1380
GCCTCTCTGG GAGGCGGATA CACGGGATCG CTGTGAGCCA CAACGGAGCG TACTGCGCCC 1440
TCGCCAGCAC GCCGGGGATG GTCGGCAGCC ACCACCCGAT CAGCAGGACC TACCAGGTTC 1500
ACTTTGTGGC CCTGAAGACG TCGGAAGAGG CCGCAGCGCT GCTGCTCAAG TCGCCCGCGC 1560
AGAACTTGTA CAAGACAGCC GACCTGCTCG ATCTGGTGAG GTGGCAGGTT TTGAAAAACA 1620
AGTGCATCCC CGCGGCGCTG CTGGACGAGG TCGACCGAAA GATCCAGGAG GTCGACTCCC 1680
CCTACTTGTG GCGCTTCAAG CTCTTCCTGG TGCGGATACT TTACCAGTCG CTGCAAATGC 1740
CTCCCACGGA CCACCACTGG AAACCGACGC ACGAGGAGAA CAAGGTGCTT GTACACGATG 1800
CGCCGCTGTT GGAAGTGAAA CAGGAGGAGG GGAACCCGGA ACAGCAGATG GAGGAGGTGC 1860
AGGCCTGGAT CAATGCCGTG GAGACCCACA TGATGAGAGA GAACATGAAG AAGGTGCTGG 1920
GGGTGGTGTA CCTCAACACC TGGATTACTC AGAACACCAG CATTCCCACA TGCGGGCTGG 1980
TGGAGTACCT CTCCAGAGAC GGCAACGACA GAGGTTCAGA GGTTCTGATT GGCCACATAA 2040
AGAACAAGAT GAACAAGCAG ACGTTCTCGG AGCGCTGCAG CTTGTGTCAG GCCGTGCTGC 2100
CCTTCTCGGA CCACAAACAG GCCGTCTGTA AAAACGGTCA CATCTGGCTC AGGTGTGTGT 2160
TGTCATACCA GGCCTGCCAG ACGCTGACGT TCAGACGTTG CCTCCTGCTG GATACCATCT 2220
CCAGACTGCC ACAGCCTGAG GATCCGGAGT GGATAAGGAA GATCCTGCAG GCGCCCTGCA 2280
CGCTCTGTGA CTCGCCGATG ATCTAGAGCC GACCGATGGG AGGAGCCTCA GGGCTTCATT 2340
AGACGCAGCG TCCACTTTCG TCACTGTTTT TTTAAATTAT TTTTTTATTC ATGTTCATTT 2400
TGTTCAAGGT TCATTTCTTT ATATTG 2427
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0158 ENSONIP00000016371.1 Oreochromis niloticus 78 0.0 1226
WERAM-Tar-0065 ENSTRUP00000013163.1 Takifugu rubripes 73 0.0 1147
WERAM-Pof-0048 ENSPFOP00000003714.1 Poecilia formosa 70 0.0 1085
WERAM-Ten-0064 ENSTNIP00000008102.1 Tetraodon nigroviridis 69 0.0 1075
WERAM-Xim-0020 ENSXMAP00000001897.1 Xiphophorus maculatus 69 0.0 1074
WERAM-Orla-0131 ENSORLP00000015493.1 Oryzias latipes 67 0.0 1066
WERAM-Leo-0050 ENSLOCP00000006815.1 Lepisosteus oculatus 56 0.0 898
WERAM-Asm-0064 ENSAMXP00000007106.1 Astyanax mexicanus 57 0.0 895
WERAM-Gaga-0167 ENSGALP00000041753.1 Gallus gallus 54 0.0 860
WERAM-Meg-0064 ENSMGAP00000006024.2 Meleagris gallopavo 54 0.0 859
WERAM-Ran-0235 ENSRNOP00000069275.1 Rattus norvegicus 53 0.0 855
WERAM-Mum-0141 ENSMUSP00000042265.5 Mus musculus 53 0.0 855
WERAM-Paa-0214 ENSPANP00000018814.1 Papio anubis 53 0.0 853
WERAM-Mam-0081 ENSMMUP00000012973.2 Macaca mulatta 53 0.0 853
WERAM-Mod-0105 ENSMODP00000015717.3 Monodelphis domestica 53 0.0 852
WERAM-Chs-0181 ENSCSAP00000011065.1 Chlorocebus sabaeus 53 0.0 852
WERAM-Caf-0206 ENSCAFP00000029457.3 Canis familiaris 53 0.0 852
WERAM-Ict-0051 ENSSTOP00000004474.2 Ictidomys tridecemlineatus 53 0.0 852
WERAM-Hos-0109 ENSP00000361219.4 Homo sapiens 53 0.0 852
WERAM-Mup-0142 ENSMPUP00000012425.1 Mustela putorius furo 53 0.0 850
WERAM-Nol-0144 ENSNLEP00000015670.1 Nomascus leucogenys 52 0.0 850
WERAM-Loa-0144 ENSLAFP00000012898.2 Loxodonta africana 52 0.0 849
WERAM-Caj-0193 ENSCJAP00000033601.2 Callithrix jacchus 53 0.0 848
WERAM-Prc-0045 ENSPCAP00000004132.1 Procavia capensis 52 0.0 848
WERAM-Poa-0187 ENSPPYP00000022107.2 Pongo abelii 53 0.0 847
WERAM-Otg-0086 ENSOGAP00000006821.2 Otolemur garnettii 52 0.0 846
WERAM-Cap-0154 ENSCPOP00000012836.2 Cavia porcellus 52 0.0 845
WERAM-Ptv-0013 ENSPVAP00000001940.1 Pteropus vampyrus 52 0.0 840
WERAM-Bot-0051 ENSBTAP00000005344.4 Bos taurus 53 0.0 839
WERAM-Eqc-0158 ENSECAP00000016787.1 Equus caballus 52 0.0 839
WERAM-Sus-0038 ENSSSCP00000006140.2 Sus scrofa 52 0.0 838
WERAM-Tag-0074 ENSTGUP00000005330.1 Taeniopygia guttata 53 0.0 835
WERAM-Aim-0054 ENSAMEP00000004386.1 Ailuropoda melanoleuca 52 0.0 829
WERAM-Lac-0076 ENSLACP00000009959.1 Latimeria chalumnae 51 0.0 822
WERAM-Ova-0057 ENSOARP00000006214.1 Ovis aries 52 0.0 820
WERAM-Anp-0004 ENSAPLP00000000397.1 Anas platyrhynchos 54 0.0 818
WERAM-Dan-0162 ENSDNOP00000018237.1 Dasypus novemcinctus 52 0.0 817
WERAM-Gog-0096 ENSGGOP00000008136.2 Gorilla gorilla 52 0.0 817
WERAM-Dar-0157 ENSDARP00000092069.4 Danio rerio 54 0.0 790
WERAM-Sah-0204 ENSSHAP00000022249.1 Sarcophilus harrisii 54 0.0 786
WERAM-Pat-0179 ENSPTRP00000036792.5 Pan troglodytes 53 0.0 781
WERAM-Orc-0084 ENSOCUP00000007559.2 Oryctolagus cuniculus 53 0.0 780
WERAM-Xet-0042 ENSXETP00000013724.2 Xenopus tropicalis 50 0.0 776
WERAM-Vip-0047 ENSVPAP00000004214.1 Vicugna pacos 49 0.0 773
WERAM-Dio-0046 ENSDORP00000004750.1 Dipodomys ordii 52 0.0 763
WERAM-Ora-0053 ENSOANP00000008018.1 Ornithorhynchus anatinus 51 0.0 762
WERAM-Fia-0020 ENSFALP00000001535.1 Ficedula albicollis 54 0.0 755
WERAM-Ect-0059 ENSETEP00000006428.1 Echinops telfairi 48 0.0 748
WERAM-Tub-0105 ENSTBEP00000011996.1 Tupaia belangeri 48 0.0 744
WERAM-Myl-0131 ENSMLUP00000010516.2 Myotis lucifugus 53 0.0 724
WERAM-Tut-0160 ENSTTRP00000013367.1 Tursiops truncatus 48 0.0 660
WERAM-Soa-0054 ENSSARP00000005355.1 Sorex araneus 48 0.0 654
WERAM-Gam-0204 ENSGMOP00000019723.1 Gadus morhua 63 7e-180 628
WERAM-Fec-0163 ENSFCAP00000025535.1 Felis catus 51 7e-174 608
WERAM-Pes-0063 ENSPSIP00000008307.1 Pelodiscus sinensis 54 4e-157 552
WERAM-Mae-0113 ENSMEUP00000010731.1 Macropus eugenii 54 3e-137 486
WERAM-Mim-0105 ENSMICP00000009672.1 Microcebus murinus 52 4e-102 369
WERAM-Ocp-0015 ENSOPRP00000001613.1 Ochotona princeps 48 3e-74 277
WERAM-Pem-0089 ENSPMAP00000009325.1 Petromyzon marinus 29 4e-42 171
WERAM-Cii-0035 ENSCINP00000013489.3 Ciona intestinalis 22 1e-24 112
Created Date 25-Jun-2016