WERAM Information

Tag Content
WERAM ID WERAM-Sah-0050
Ensembl Protein ID ENSSHAP00000005569.1
Gene Name TRIM28
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSHAG00000004865.1 ENSSHAT00000005623.1 ENSSHAP00000005569.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.70e-15 55.6 448 527
Organism Sarcophilus harrisii
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt   1 kehevsepF..repvdpq.leipdYydiikeP..mdLstikerleegn...YsspeefvkDvrlifnNakaynenkssvq 72 
                           k+++v+ ++  +ep++p   +++d + + ++P  +dL++i++rl+e+    Yssp+ef++Dv ++f+++++++e+k++vq
  ENSSHAP00000005569.1 448 KCERVLLALlcHEPCRPLhRLATDPTPSAEQPgtLDLTLIRARLQEKLsppYSSPQEFAQDVGRMFKQFNKLTEDKADVQ 527
                           68888888889******************************************************************997 PP
Protein Sequence
(Fasta)		RYQFLEDAVR NQRKLLASLV KRLGDKHATL QKNTKEVRTS IRQVTDVQKR VQVDVKMAIL 60
QIMKELNKRG RVLVNDAQKV TEGQQERLER QHWTMTKIQR HQEHILRFAS WALESDNNTA 120
LLLSKKLIYF QLHRALKMIV DPVEPQGDMK FQWDLNAWTK SAEAFGKIVS ERSGPGSMAP 180
PRAPGKPGGN QAMDLQEGYG SYGPDDPYSA EPNVSGMKRS RSGEGEVSGL MRKVPRVSLE 240
RLDLDLTADS QPPVFKVFPG TTNEDYNLIV IERGGQPGAP GGPPMPPMAM VKEEETEAAI 300
GAPPGVEGLE TKPLLLPPLE ASGPEGPHLA SPSGSTSSGL EVLGGPEAAA AATAASGGPG 360
AVDDSATVCR VCQKPGDLVM CSQCEFCFHL ECHLPALQEV PGEEWSCSLC QEVVDCKDEV 420
PLPGPESVAL TPDGNTCPAK LSPTNQQKCE RVLLALLCHE PCRPLHRLAT DPTPSAEQPG 480
TLDLTLIRAR LQEKLSPPYS SPQEFAQDVG RMFKQFNKLT EDKADVQSII GLQRFFETRM 540
NEAFGDTKFS AILVEPLPPI PGPGLAPPEL VGGPSDGN 578
Nucleotide Sequence
(Fasta)		AGGTACCAGT TCCTGGAGGA TGCCGTCAGA AACCAGAGGA AGCTCCTGGC CTCCTTGGTC 60
AAGCGCCTGG GGGACAAGCA CGCCACCCTG CAGAAGAACA CCAAGGAAGT GCGCACCTCC 120
ATCCGCCAAG TGACAGATGT GCAGAAGCGG GTACAGGTGG ATGTAAAGAT GGCCATCCTG 180
CAGATCATGA AGGAGCTCAA CAAGCGGGGC CGTGTGCTGG TCAACGACGC CCAGAAGGTG 240
ACGGAGGGCC AGCAGGAGCG GCTGGAGCGC CAGCACTGGA CCATGACCAA GATTCAGCGG 300
CATCAGGAGC ACATCCTGCG CTTTGCCTCC TGGGCCCTGG AGAGCGACAA CAACACGGCC 360
CTGCTGCTGT CCAAGAAGCT GATTTACTTC CAGCTGCACC GAGCTCTCAA GATGATCGTG 420
GACCCCGTGG AGCCTCAGGG CGACATGAAG TTCCAGTGGG ACCTCAACGC CTGGACCAAA 480
AGTGCCGAGG CCTTCGGCAA GATTGTTTCT GAGAGAAGTG GTCCTGGTTC CATGGCCCCG 540
CCCCGGGCCC CTGGAAAGCC TGGAGGGAAT CAGGCCATGG ACCTGCAGGA GGGCTATGGG 600
AGTTACGGCC CAGATGATCC CTACAGCGCT GAACCCAACG TGTCTGGAAT GAAGAGGTCC 660
CGGTCCGGTG AGGGGGAAGT GAGCGGCCTC ATGCGGAAGG TGCCCAGGGT GAGCCTGGAG 720
CGCCTCGATC TGGACCTGAC CGCGGACAGC CAGCCCCCCG TCTTCAAAGT CTTCCCGGGG 780
ACCACTAACG AGGACTACAA CCTCATTGTC ATTGAGAGGG GGGGCCAGCC TGGGGCCCCA 840
GGGGGTCCTC CCATGCCCCC CATGGCCATG GTCAAGGAGG AAGAGACAGA AGCTGCCATC 900
GGAGCCCCCC CAGGGGTGGA GGGGCTGGAG ACAAAACCAC TGCTGCTGCC TCCCCTGGAG 960
GCCTCGGGCC CTGAAGGCCC CCACCTGGCC TCCCCCAGCG GCAGCACCAG CTCTGGCCTG 1020
GAAGTGTTGG GAGGCCCCGA GGCGGCCGCG GCAGCCACAG CGGCCTCCGG CGGCCCCGGA 1080
GCTGTGGATG ACAGCGCCAC TGTCTGCCGT GTCTGCCAGA AGCCGGGTGA CCTGGTGATG 1140
TGTAGCCAGT GCGAATTCTG CTTCCATTTG GAGTGTCACC TGCCTGCCCT GCAGGAGGTG 1200
CCAGGGGAGG AGTGGAGCTG TTCCCTCTGC CAGGAAGTGG TGGACTGTAA AGATGAGGTT 1260
CCTCTTCCCG GCCCCGAGAG CGTGGCCTTG ACCCCTGATG GGAACACCTG CCCTGCCAAG 1320
CTGTCGCCCA CTAACCAGCA GAAATGCGAA CGTGTGCTGC TGGCCCTGCT CTGCCACGAG 1380
CCCTGCCGCC CCCTGCACCG GCTGGCCACA GATCCCACGC CCTCGGCGGA GCAGCCCGGG 1440
ACCCTGGACC TCACTCTGAT CCGGGCGCGC CTCCAGGAGA AGCTATCGCC CCCCTACAGC 1500
TCCCCCCAGG AGTTTGCCCA GGACGTGGGC CGCATGTTCA AGCAATTCAA TAAGCTTACA 1560
GAGGACAAAG CCGACGTGCA GTCCATCATC GGGCTCCAGC GCTTCTTCGA GACTCGCATG 1620
AACGAGGCTT TCGGGGACAC CAAGTTCTCG GCTATTCTGG TGGAGCCCCT TCCGCCCATC 1680
CCAGGCCCCG GTCTGGCACC TCCAGAGCTG GTGGGGGGCC CCAGTGACGG TAACTGA 1738
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mae-0121 ENSMEUP00000012357.1 Macropus eugenii 93 0.0 948
WERAM-Mup-0087 ENSMPUP00000008211.1 Mustela putorius furo 79 0.0 838
WERAM-Aim-0085 ENSAMEP00000007951.1 Ailuropoda melanoleuca 79 0.0 837
WERAM-Ocp-0151 ENSOPRP00000015562.1 Ochotona princeps 77 0.0 837
WERAM-Fec-0043 ENSFCAP00000003461.2 Felis catus 79 0.0 837
WERAM-Tut-0023 ENSTTRP00000001873.1 Tursiops truncatus 78 0.0 824
WERAM-Caf-0029 ENSCAFP00000003412.4 Canis familiaris 78 0.0 823
WERAM-Ran-0164 ENSRNOP00000031061.2 Rattus norvegicus 76 0.0 820
WERAM-Mum-0015 ENSMUSP00000005705.7 Mus musculus 76 0.0 819
WERAM-Myl-0157 ENSMLUP00000013021.2 Myotis lucifugus 77 0.0 818
WERAM-Chs-0017 ENSCSAP00000016435.1 Chlorocebus sabaeus 77 0.0 816
WERAM-Paa-0099 ENSPANP00000001565.1 Papio anubis 77 0.0 815
WERAM-Ova-0030 ENSOARP00000004219.1 Ovis aries 77 0.0 814
WERAM-Hos-0120 ENSP00000253024.4 Homo sapiens 77 0.0 813
WERAM-Mam-0187 ENSMMUP00000026375.2 Macaca mulatta 77 0.0 813
WERAM-Gog-0147 ENSGGOP00000013024.2 Gorilla gorilla 77 0.0 813
WERAM-Ict-0159 ENSSTOP00000017511.1 Ictidomys tridecemlineatus 78 0.0 813
WERAM-Orc-0163 ENSOCUP00000014282.2 Oryctolagus cuniculus 76 0.0 813
WERAM-Bot-0067 ENSBTAP00000008424.5 Bos taurus 77 0.0 810
WERAM-Otg-0221 ENSOGAP00000018045.1 Otolemur garnettii 77 0.0 808
WERAM-Caj-0003 ENSCJAP00000000424.2 Callithrix jacchus 76 0.0 807
WERAM-Dan-0038 ENSDNOP00000003891.2 Dasypus novemcinctus 78 0.0 806
WERAM-Dio-0055 ENSDORP00000005088.1 Dipodomys ordii 76 0.0 804
WERAM-Loa-0188 ENSLAFP00000022715.1 Loxodonta africana 77 0.0 793
WERAM-Ptv-0160 ENSPVAP00000013180.1 Pteropus vampyrus 76 0.0 792
WERAM-Cap-0067 ENSCPOP00000005181.2 Cavia porcellus 75 0.0 786
WERAM-Prc-0074 ENSPCAP00000006707.1 Procavia capensis 77 0.0 786
WERAM-Nol-0117 ENSNLEP00000013612.1 Nomascus leucogenys 72 0.0 756
WERAM-Ere-0105 ENSEEUP00000011509.1 Erinaceus europaeus 70 0.0 694
WERAM-Pes-0132 ENSPSIP00000015657.1 Pelodiscus sinensis 60 4e-179 625
WERAM-Anc-0111 ENSACAP00000010492.2 Anolis carolinensis 60 4e-174 608
WERAM-Xet-0120 ENSXETP00000041702.2 Xenopus tropicalis 54 2e-155 546
WERAM-Pat-0093 ENSPTRP00000048454.2 Pan troglodytes 85 3e-134 476
WERAM-Lac-0052 ENSLACP00000007218.1 Latimeria chalumnae 41 2e-111 400
WERAM-Eqc-0070 ENSECAP00000008770.1 Equus caballus 70 2e-102 370
WERAM-Ect-0044 ENSETEP00000004682.1 Echinops telfairi 55 9e-98 355
WERAM-Mim-0028 ENSMICP00000002763.1 Microcebus murinus 93 1e-92 337
WERAM-Soa-0013 ENSSARP00000001458.1 Sorex araneus 81 1e-61 234
WERAM-Fia-0157 ENSFALP00000013428.1 Ficedula albicollis 58 5e-54 209
WERAM-Meg-0079 ENSMGAP00000007107.1 Meleagris gallopavo 65 2e-35 147
WERAM-Anp-0085 ENSAPLP00000010241.1 Anas platyrhynchos 35 9e-30 129
WERAM-Gaga-0021 ENSGALP00000003066.4 Gallus gallus 35 9e-30 129
WERAM-Leo-0095 ENSLOCP00000012853.1 Lepisosteus oculatus 34 1e-29 128
WERAM-Tag-0017 ENSTGUP00000001056.1 Taeniopygia guttata 35 2e-29 128
WERAM-Poa-0007 ENSPPYP00000001169.2 Pongo abelii 35 2e-29 127
WERAM-Mod-0002 ENSMODP00000000527.3 Monodelphis domestica 35 2e-29 127
WERAM-Tas-0025 ENSTSYP00000002916.1 Tarsius syrichta 35 4e-29 127
WERAM-Gam-0174 ENSGMOP00000017205.1 Gadus morhua 32 5e-29 126
WERAM-Ora-0046 ENSOANP00000007156.1 Ornithorhynchus anatinus 35 5e-29 126
WERAM-Sus-0170 ENSSSCP00000021501.1 Sus scrofa 36 1e-28 125
WERAM-Gaa-0050 ENSGACP00000006576.1 Gasterosteus aculeatus 32 2e-28 125
WERAM-Orla-0005 ENSORLP00000000400.1 Oryzias latipes 31 2e-28 124
WERAM-Dar-0038 ENSDARP00000025140.8 Danio rerio 32 5e-28 123
WERAM-Asm-0128 ENSAMXP00000012606.1 Astyanax mexicanus 33 1e-27 122
WERAM-Chh-0017 ENSCHOP00000001525.1 Choloepus hoffmanni 36 2e-27 121
WERAM-Tar-0093 ENSTRUP00000018722.1 Takifugu rubripes 31 3e-27 120
WERAM-Orn-0109 ENSONIP00000011616.1 Oreochromis niloticus 29 6e-27 119
WERAM-Pof-0128 ENSPFOP00000011263.2 Poecilia formosa 30 6e-26 116
WERAM-Xim-0046 ENSXMAP00000004390.1 Xiphophorus maculatus 30 4e-25 113
WERAM-Vip-0082 ENSVPAP00000007497.1 Vicugna pacos 31 7e-24 109
WERAM-Ten-0081 ENSTNIP00000009576.1 Tetraodon nigroviridis 29 3e-23 107
WERAM-Tub-0040 ENSTBEP00000005075.1 Tupaia belangeri 31 6e-21 99.8
WERAM-Cii-0027 ENSCINP00000010542.3 Ciona intestinalis 30 3e-13 74.7
Created Date 25-Jun-2016