| Tag |
Content |
| WERAM ID |
WERAM-Soa-0047 |
| Ensembl Protein ID |
ENSSARP00000004394.1 |
| Gene Name |
CBX1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| Me_Reader |
Chromodomain |
3.30e-18 |
64.9 |
22 |
178 |
| Me_Reader |
DCD |
1.70e-36 |
111.1 |
23 |
78 |
|
| Organism |
Sorex araneus |
| Domain Profile |
Me_Reader Chromodomain
Chromodomain.txt 2 everivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefekkke 53
ve+++ ++++ kg+veYl +WkG++++d+tWepeenL c+ l++ef + ++
ENSSARP00000004394.1 22 VVEKVL-DRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQK 72
589999.99999***********************************77655 PP
Chromodomain.txt 4 erivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefek 50
eri+ + ge +l +Wk+ ++ d e n +c++++ f +
ENSSARP00000004394.1 120 ERII-GATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYE 165
5566.4555678999******98888777777778888888777755 PP
Chromodomain.txt 23 WkGynksdd 31
W y+++dd
ENSSARP00000004394.1 170 WHSYPSEDD 178
999999998 PP
Me_Reader DCD
Chromo-2.txt 3 verIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeeresmrgee 61
ve++++ kG+++yL+kWk+ +we++ en ++p l+ +f ++++ ++ +
ENSSARP00000004394.1 23 VEKVLDRR-VVKGKVEYLLKWKGFSDEDNTWEPE--ENLDCPDLIAEFLQSQKTAHESD 78
77888877.689***********98888899986..79*************99999865 PP
Chromo-2.txt 2 mverIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeeresmrgee 61
++erIi+++ d++Gel++L+kWk++ dea++++a+++n k+pq+v+sfyeer+++++++
ENSSARP00000004394.1 118 EPERIIGAT-DSSGELMFLMKWKNS--DEADLVPAKEANVKCPQVVISFYEERLTWHSYP 174
79*******.***************..******************************986 PP
|
Protein Sequence
(Fasta) | MGKKQNKKKV EEVLEEEEEE YVVEKVLDRR VVKGKVEYLL KWKGFSDEDN TWEPEENLDC 60
PDLIAEFLQS QKTAHESDKT EGGKRKADSD TEDKGDDNKP KKKKEESEKP RGFARGLEPE 120
RIIGATDSSG ELMFLMKWKN SDEADLVPAK EANVKCPQVV ISFYEERLTW HSYPSEDDDK 180
KDDKN 185Protein Fasta Sequence
>ENSSARP00000004394.1|DCD|Sorex araneus
MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESDKTEGGKRKADSDTEDKGDDNKPKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHSYPSEDDDKKDDKN |
Nucleotide Sequence
(Fasta) | ATGGGGAAGA AACAAAACAA GAAGAAAGTG GAAGAGGTGC TAGAAGAGGA AGAAGAGGAA 60
TATGTGGTAG AAAAAGTTCT TGATCGACGA GTGGTAAAAG GCAAAGTGGA ATATCTCCTC 120
AAGTGGAAGG GATTCTCAGA CGAGGATAAC ACATGGGAGC CAGAAGAGAA CCTGGATTGC 180
CCTGACCTCA TTGCCGAATT CCTGCAATCA CAGAAAACAG CACACGAGAG TGATAAAACA 240
GAGGGAGGAA AACGTAAAGC TGACTCTGAT ACTGAAGACA AGGGAGATGA CAACAAGCCA 300
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGTTTTG CCCGAGGTTT GGAGCCAGAG 360
CGGATTATTG GAGCAACAGA CTCCAGTGGA GAACTTATGT TCCTGATGAA ATGGAAAAAT 420
TCGGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGTCC ACAGGTTGTC 480
ATATCCTTCT ATGAGGAAAG GCTGACATGG CATTCCTACC CTTCGGAGGA TGATGACAAA 540
AAAGATGACA AGAATTAA
559Nucleotide Fasta Sequence
>ENSSARP00000004394.1|DCD|Sorex araneus
ATGGGGAAGAAACAAAACAAGAAGAAAGTGGAAGAGGTGCTAGAAGAGGAAGAAGAGGAATATGTGGTAGAAAAAGTTCTTGATCGACGAGTGGTAAAAGGCAAAGTGGAATATCTCCTCAAGTGGAAGGGATTCTCAGACGAGGATAACACATGGGAGCCAGAAGAGAACCTGGATTGCCCTGACCTCATTGCCGAATTCCTGCAATCACAGAAAACAGCACACGAGAGTGATAAAACAGAGGGAGGAAAACGTAAAGCTGACTCTGATACTGAAGACAAGGGAGATGACAACAAGCCAAAGAAGAAGAAAGAAGAGTCAGAAAAGCCACGAGGTTTTGCCCGAGGTTTGGAGCCAGAGCGGATTATTGGAGCAACAGACTCCAGTGGAGAACTTATGTTCCTGATGAAATGGAAAAATTCGGATGAGGCTGACCTGGTCCCTGCCAAGGAAGCCAATGTCAAGTGTCCACAGGTTGTCATATCCTTCTATGAGGAAAGGCTGACATGGCATTCCTACCCTTCGGAGGATGATGACAAAAAAGATGACAAGAATTAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
