WERAM Information

Tag Content
WERAM ID WERAM-Orla-0130
Ensembl Protein ID ENSORLP00000015474.1
Gene Name cbx1b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000012360.1 ENSORLT00000015475.1 ENSORLP00000015474.1
ENSORLG00000012360.1 ENSORLT00000015476.1 ENSORLP00000015475.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Chromodomain 4.70e-18 65.3 20 155
Me_Reader DCD 4.70e-36 109.8 20 69
Organism Oryzias latipes
Domain Profile
  Me_Reader Chromodomain
      Chromodomain.txt  2 everivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefekk 51
                           ve+++ ++++ kg+veYl +WkG++++d+tWepe+nL c+ l++ef + 
  ENSORLP00000015474.1 20 VVEKVL-NRRVVKGRVEYLLKWKGFSEEDNTWEPEDNLDCPDLIAEFLQS 68
                          59****.****************************************765 PP
      Chromodomain.txt   4 erivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefek 50 
                           eri+   +   ge  +l +Wk+ ++ d     e n +c++++  f +
  ENSORLP00000015474.1 110 ERII-GATDSTGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYE 155
                           5566.4455678999******98888877777788888888877765 PP
  Me_Reader DCD
          Chromo-2.txt  2 mverIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeer 54
                          +ve+++n     kG+++yL+kWk+      +we++  +n ++p l+ +f  ++
  ENSORLP00000015474.1 20 VVEKVLNRR-VVKGRVEYLLKWKGFSEEDNTWEPE--DNLDCPDLIAEFLQSQ 69
                          589999988.789***********96666777776..699******9997766 PP
          Chromo-2.txt   2 mverIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeeresmrgee 61 
                           ++erIi+++ d++Gel++L+kWk++  dea++++a+++n k+pq+v+sfyeer+++++++
  ENSORLP00000015474.1 108 EPERIIGAT-DSTGELMFLMKWKNS--DEADLVPAKEANVKCPQVVISFYEERLTWHSYP 164
                           79*******.***************..******************************986 PP
Protein Sequence
(Fasta)		KQEQKKRTNM GFQYKRRRYV VEKVLNRRVV KGRVEYLLKW KGFSEEDNTW EPEDNLDCPD 60
LIAEFLQSQK AAHDGKRKAA GDAEGDDSKS KKKKDDTEKL RGFARGLEPE RIIGATDSTG 120
ELMFLMKWKN SDEADLVPAK EANVKCPQVV ISFYEERLTW HSYPSEDEKK DDKN 174
Nucleotide Sequence
(Fasta)		AAACAAGAAC AAAAGAAAAG AACCAATATG GGGTTTCAGT ATAAGAGACG CAGATATGTG 60
GTGGAAAAGG TCCTTAACCG TCGAGTGGTA AAAGGGAGGG TGGAATATCT GCTCAAGTGG 120
AAAGGCTTCT CTGAGGAAGA CAATACATGG GAGCCAGAGG ACAACTTGGA TTGTCCAGAT 180
TTGATAGCAG AGTTTTTGCA GTCCCAGAAA GCAGCGCATG ATGGAAAACG GAAGGCTGCA 240
GGAGATGCAG AAGGAGATGA CAGTAAATCA AAGAAGAAGA AAGACGATAC TGAGAAGCTG 300
AGGGGCTTTG CTCGCGGCCT GGAGCCAGAG AGGATCATCG GAGCCACAGA TTCCACAGGA 360
GAACTCATGT TCCTCATGAA ATGGAAAAAT TCAGATGAAG CCGACCTGGT GCCGGCTAAA 420
GAGGCCAACG TCAAGTGTCC GCAAGTGGTC ATCTCCTTCT ACGAAGAGAG ACTCACCTGG 480
CACTCGTATC CCTCTGAAGA CGAGAAGAAG GATGACAAAA ACTAGAAAAG AGAGCTAGTT 540
TGGATTGAAC TTGATTGTAC TTTAAAGGTG GGCTTCTGGA GGGGCTGCAG ACCAGCAGGA 600
CATCATTGGA CTCATATTGG TGCTTTACCA TTCATTCCAT TCTTTTTTGT GGATATGATC 660
TTAAAAAAAT GTATGCTTCA AGTGTGTGCA GCAACAGCTC AAGCAGTGTT AGTTTCCTGC 720
ATCCATTCCA GTCCAGTTGT TTTTGAAACG GTTGCTCTCC TCGTGCATGC TTACAGGTTT 780
ACAGGTCGCA GCTTTGCTGT CATTTTTGTC GTGATGCCAG CCAGTGGAGT TACCGTTTTT 840
ATTTCCCGTC AAATTTAAAC TTCACAAGAT AAAAGATTCC TCTCTGTGCA TTTCCTTTTA 900
GAAAACACGA CTATTTACCG CCCCAATGTT ACATGTATGA CGAGGTGAAA AACTGGGCCT 960
TTTTCTACTT GACTGTAAAG TGTGAAGTGC ACCAGTTAAA GCCAGATTGA AATTTCAATT 1020
CATTAACAAT TTTGT 1036
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Tar-0143 ENSTRUP00000030902.1 Takifugu rubripes 92 1e-76 282
WERAM-Ten-0119 ENSTNIP00000002974.1 Tetraodon nigroviridis 85 3e-76 280
WERAM-Orn-0219 ENSONIP00000022937.1 Oreochromis niloticus 96 3e-75 277
WERAM-Gaa-0031 ENSGACP00000005142.1 Gasterosteus aculeatus 91 4e-74 273
WERAM-Pof-0256 ENSPFOP00000031018.1 Poecilia formosa 90 3e-71 264
WERAM-Gam-0030 ENSGMOP00000003256.1 Gadus morhua 87 4e-71 263
WERAM-Leo-0134 ENSLOCP00000016544.1 Lepisosteus oculatus 81 1e-66 248
WERAM-Cap-0101 ENSCPOP00000007559.2 Cavia porcellus 80 4e-66 247
WERAM-Xet-0140 ENSXETP00000047517.3 Xenopus tropicalis 82 2e-65 245
WERAM-Dar-0110 ENSDARP00000039666.5 Danio rerio 81 3e-65 244
WERAM-Ora-0043 ENSOANP00000006668.1 Ornithorhynchus anatinus 82 4e-64 240
WERAM-Paa-0176 ENSPANP00000020092.1 Papio anubis 81 7e-64 239
WERAM-Gog-0205 ENSGGOP00000017163.1 Gorilla gorilla 80 2e-63 238
WERAM-Lac-0097 ENSLACP00000012217.1 Latimeria chalumnae 80 3e-63 238
WERAM-Gaga-0002 ENSGALP00000029248.3 Gallus gallus 81 3e-63 238
WERAM-Pes-0067 ENSPSIP00000008496.1 Pelodiscus sinensis 81 3e-63 237
WERAM-Anp-0066 ENSAPLP00000007544.1 Anas platyrhynchos 81 4e-63 237
WERAM-Asm-0109 ENSAMXP00000010877.1 Astyanax mexicanus 78 7e-63 236
WERAM-Otg-0070 ENSOGAP00000005054.2 Otolemur garnettii 83 7e-63 236
WERAM-Anc-0067 ENSACAP00000006455.3 Anolis carolinensis 79 8e-63 236
WERAM-Chs-0031 ENSCSAP00000015496.1 Chlorocebus sabaeus 83 1e-62 236
WERAM-Orc-0199 ENSOCUP00000020709.1 Oryctolagus cuniculus 81 2e-62 235
WERAM-Poa-0134 ENSPPYP00000016983.1 Pongo abelii 83 2e-62 235
WERAM-Ran-0054 ENSRNOP00000011665.2 Rattus norvegicus 83 2e-62 234
WERAM-Sus-0133 ENSSSCP00000018577.2 Sus scrofa 83 2e-62 234
WERAM-Ptv-0018 ENSPVAP00000002428.1 Pteropus vampyrus 83 2e-62 234
WERAM-Pat-0207 ENSPTRP00000060849.1 Pan troglodytes 83 2e-62 234
WERAM-Ova-0073 ENSOARP00000007830.1 Ovis aries 83 2e-62 234
WERAM-Ocp-0040 ENSOPRP00000003390.1 Ochotona princeps 83 2e-62 234
WERAM-Nol-0025 ENSNLEP00000002985.1 Nomascus leucogenys 83 2e-62 234
WERAM-Mup-0175 ENSMPUP00000015192.1 Mustela putorius furo 83 2e-62 234
WERAM-Mim-0093 ENSMICP00000008652.1 Microcebus murinus 83 2e-62 234
WERAM-Loa-0168 ENSLAFP00000015531.2 Loxodonta africana 83 2e-62 234
WERAM-Ict-0173 ENSSTOP00000021591.1 Ictidomys tridecemlineatus 83 2e-62 234
WERAM-Hos-0072 ENSP00000225603.4 Homo sapiens 83 2e-62 234
WERAM-Fec-0063 ENSFCAP00000005628.1 Felis catus 83 2e-62 234
WERAM-Eqc-0041 ENSECAP00000006035.1 Equus caballus 83 2e-62 234
WERAM-Ect-0002 ENSETEP00000000152.1 Echinops telfairi 83 2e-62 234
WERAM-Dio-0002 ENSDORP00000000668.1 Dipodomys ordii 83 2e-62 234
WERAM-Chh-0093 ENSCHOP00000010569.1 Choloepus hoffmanni 83 2e-62 234
WERAM-Caf-0175 ENSCAFP00000024749.3 Canis familiaris 83 2e-62 234
WERAM-Bot-0038 ENSBTAP00000056404.1 Bos taurus 83 2e-62 234
WERAM-Tub-0117 ENSTBEP00000012952.1 Tupaia belangeri 83 2e-62 234
WERAM-Caj-0084 ENSCJAP00000014014.2 Callithrix jacchus 79 2e-62 234
WERAM-Sah-0084 ENSSHAP00000009467.1 Sarcophilus harrisii 83 8e-62 233
WERAM-Mod-0103 ENSMODP00000015491.2 Monodelphis domestica 83 8e-62 233
WERAM-Aim-0059 ENSAMEP00000005159.1 Ailuropoda melanoleuca 79 8e-62 233
WERAM-Myl-0056 ENSMLUP00000004587.1 Myotis lucifugus 83 1e-61 232
WERAM-Meg-0009 ENSMGAP00000000674.1 Meleagris gallopavo 80 2e-61 231
WERAM-Soa-0047 ENSSARP00000004394.1 Sorex araneus 80 3e-61 231
WERAM-Ere-0053 ENSEEUP00000004419.1 Erinaceus europaeus 83 3e-61 231
WERAM-Prc-0029 ENSPCAP00000002216.1 Procavia capensis 83 4e-61 231
WERAM-Mam-0154 ENSMMUP00000021644.2 Macaca mulatta 82 6e-61 230
WERAM-Xim-0037 ENSXMAP00000003564.1 Xiphophorus maculatus 73 3e-58 221
WERAM-Pem-0070 ENSPMAP00000007598.1 Petromyzon marinus 71 6e-58 220
WERAM-Vip-0106 ENSVPAP00000009695.1 Vicugna pacos 76 8e-54 206
WERAM-Mum-0104 ENSMUSP00000031862.7 Mus musculus 76 9e-54 206
WERAM-Tut-0053 ENSTTRP00000004253.1 Tursiops truncatus 61 9e-54 206
WERAM-Tag-0045 ENSTGUP00000002967.1 Taeniopygia guttata 74 2e-53 205
WERAM-Tas-0077 ENSTSYP00000007470.1 Tarsius syrichta 76 2e-53 205
WERAM-Dan-0069 ENSDNOP00000007127.2 Dasypus novemcinctus 63 2e-53 205
WERAM-Fia-0115 ENSFALP00000009927.1 Ficedula albicollis 74 3e-53 204
WERAM-Mae-0074 ENSMEUP00000007510.1 Macropus eugenii 58 2e-47 185
WERAM-Cii-0080 ENSCINP00000030026.1 Ciona intestinalis 54 9e-44 173
WERAM-Drm-0034 FBpp0071221 Drosophila melanogaster 57 4e-41 164
WERAM-Cis-0006 ENSCSAVP00000000838.1 Ciona savignyi 68 3e-24 108
WERAM-Cae-0010 K01G5.2a Caenorhabditis elegans 36 3e-18 88.6
Created Date 25-Jun-2016