WERAM Information

Tag Content
WERAM ID WERAM-Ran-0197
Ensembl Protein ID ENSRNOP00000066624.1
Gene Name Cbx4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000046207.1 ENSRNOT00000075440.1 ENSRNOP00000066624.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Chromodomain 3.50e-23 81.9 11 68
Organism Rattus norvegicus
Domain Profile
  Me_Reader Chromodomain
      Chromodomain.txt  1 FeverivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefekkkekkkkqg 59
                          F+ve+i  kk++rkg+veYlV+W+G++++++tWepeen+l+++ll +f++++++++++g
  ENSRNOP00000066624.1 11 FAVESIE-KKRIRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLLIAFQNRERQEQLMG 68
                          99*****.***********************************************9987 PP
Protein Sequence
(Fasta)		MELPAVGEHV FAVESIEKKR IRKGRVEYLV KWRGWSPKYN TWEPEENILD PRLLIAFQNR 60
ERQEQLMGYR KRGPKPKPLV VQVPTFARRS NVLTGLQDSS ADNRAKLELG TQGKGQGHQY 120
ELNSKKHHQY QPHGKERSGK PPPPGKSGKY YYQLNSKKHH PYQPDPKMYD LQYQGSHKEA 180
PSPTCPDLGA KSHPPDKWAH GAAAKGYLGA VKPLGGGAGA PGKGSEKGPP NGLPQADRTF 240
KKAAGASEEK KAEVPCKRRE EEALVSGDPQ PQDLGSRKLS PTKEAFGEQP LQLTTKPDLL 300
AWDPARSSHP PAHHHFHHHH HHHHHTVGLN LSHARKRCLS ETHGEREPCK KRLTARSIST 360
PTCLGGSPVS EHPANVSPTA ASLPQPEVIL LDSDLDEPID LRCVKMRSDA GEPPSTLQVK 420
PEAPAVAAVV APATAAEKPP AEAQEEPAEP LSEFKPFFGN IIITDVTANC LTVTFKEYVT 480
V 481
Nucleotide Sequence
(Fasta)		ATGGAGCTGC CAGCTGTTGG CGAGCACGTC TTCGCGGTGG AGAGCATCGA GAAGAAGCGG 60
ATCCGCAAGG GCAGAGTGGA GTATCTGGTG AAATGGAGAG GCTGGTCCCC CAAATATAAC 120
ACGTGGGAAC CAGAGGAGAA CATCTTGGAT CCCCGTCTGC TGATTGCCTT CCAGAACAGG 180
GAAAGGCAGG AGCAGCTGAT GGGATATCGA AAGAGAGGGC CCAAGCCCAA ACCGCTGGTG 240
GTGCAGGTAC CCACCTTTGC CCGCCGCTCC AATGTCCTGA CTGGGCTTCA AGACTCCTCC 300
GCTGACAACC GTGCCAAGCT GGAGTTGGGC ACGCAGGGCA AGGGCCAGGG GCACCAGTAT 360
GAGCTCAACA GCAAGAAGCA CCATCAGTAC CAGCCCCACG GCAAGGAGAG GTCCGGTAAG 420
CCGCCCCCAC CAGGGAAGAG CGGCAAGTAT TACTATCAGC TAAATAGCAA AAAACACCAC 480
CCCTACCAGC CAGACCCCAA AATGTACGAC CTGCAGTACC AGGGCAGCCA CAAGGAGGCA 540
CCCAGCCCCA CCTGCCCAGA CCTGGGCGCC AAGAGCCACC CTCCTGACAA GTGGGCCCAC 600
GGAGCTGCAG CCAAAGGCTA CCTCGGGGCA GTGAAGCCCT TGGGGGGAGG GGCAGGAGCT 660
CCAGGCAAGG GCTCGGAAAA GGGCCCCCCG AATGGCTTGC CCCAGGCCGA CAGGACTTTT 720
AAAAAGGCAG CCGGTGCTTC TGAGGAGAAG AAAGCCGAAG TGCCCTGCAA ACGCAGGGAG 780
GAGGAGGCTC TGGTGTCGGG GGACCCCCAG CCCCAGGACC TAGGGTCTCG AAAGCTCTCC 840
CCGACCAAGG AGGCCTTTGG TGAGCAGCCG CTGCAGCTCA CCACCAAGCC AGACCTGCTG 900
GCCTGGGACC CAGCCAGGAG CTCACACCCG CCCGCCCACC ACCATTTTCA CCACCACCAT 960
CACCACCACC ACCATACGGT GGGCCTGAAC CTCTCCCATG CGCGCAAGCG CTGCCTCTCC 1020
GAGACCCATG GCGAGCGTGA GCCCTGCAAG AAGCGGCTGA CCGCCCGTAG CATCAGCACG 1080
CCGACCTGCC TGGGGGGCAG CCCGGTCTCT GAGCACCCTG CCAACGTATC CCCCACCGCA 1140
GCCTCTCTTC CGCAGCCGGA GGTCATCCTT TTGGACTCAG ACCTGGATGA GCCCATAGAC 1200
TTGCGCTGTG TCAAGATGCG CAGCGATGCC GGGGAACCGC CCAGCACCCT CCAGGTGAAG 1260
CCGGAGGCTC CGGCAGTGGC GGCAGTGGTG GCGCCGGCCA CTGCAGCGGA GAAGCCTCCC 1320
GCTGAGGCCC AGGAGGAGCC AGCGGAGCCC CTGAGTGAAT TTAAGCCCTT CTTTGGGAAT 1380
ATAATTATCA CTGACGTCAC GGCGAACTGC CTCACCGTCA CTTTCAAGGA ATACGTGACG 1440
GTGTAG 1447
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0165 ENSMUSP00000026665.7 Mus musculus 99 1e-110 397
WERAM-Otg-0228 ENSOGAP00000015725.1 Otolemur garnettii 96 3e-109 392
WERAM-Ict-0199 ENSSTOP00000021274.1 Ictidomys tridecemlineatus 97 5e-109 392
WERAM-Sus-0127 ENSSSCP00000018183.2 Sus scrofa 97 7e-109 391
WERAM-Paa-0138 ENSPANP00000016273.1 Papio anubis 96 1e-108 390
WERAM-Chs-0027 ENSCSAP00000015691.1 Chlorocebus sabaeus 96 2e-108 390
WERAM-Pat-0211 ENSPTRP00000060551.1 Pan troglodytes 96 2e-108 390
WERAM-Hos-0137 ENSP00000269397.4 Homo sapiens 96 2e-108 390
WERAM-Bot-0095 ENSBTAP00000040225.3 Bos taurus 96 4e-101 365
WERAM-Gog-0105 ENSGGOP00000009074.2 Gorilla gorilla 81 5e-90 329
WERAM-Xet-0083 ENSXETP00000028020.2 Xenopus tropicalis 69 3e-71 266
WERAM-Lac-0174 ENSLACP00000020449.1 Latimeria chalumnae 72 8e-68 255
WERAM-Leo-0140 ENSLOCP00000017081.1 Lepisosteus oculatus 75 3e-67 253
WERAM-Pof-0094 ENSPFOP00000008164.1 Poecilia formosa 67 2e-63 240
WERAM-Asm-0047 ENSAMXP00000006389.1 Astyanax mexicanus 71 3e-63 239
WERAM-Xim-0012 ENSXMAP00000001412.1 Xiphophorus maculatus 67 4e-63 239
WERAM-Gam-0115 ENSGMOP00000012079.1 Gadus morhua 69 4e-63 239
WERAM-Dar-0204 ENSDARP00000132706.1 Danio rerio 68 4e-63 239
WERAM-Gaa-0120 ENSGACP00000015523.1 Gasterosteus aculeatus 68 1e-62 238
WERAM-Ten-0209 ENSTNIP00000021158.1 Tetraodon nigroviridis 69 5e-62 236
WERAM-Orla-0091 ENSORLP00000011275.1 Oryzias latipes 67 2e-61 233
WERAM-Tar-0026 ENSTRUP00000005380.1 Takifugu rubripes 67 7e-61 232
WERAM-Orn-0209 ENSONIP00000021667.1 Oreochromis niloticus 65 2e-60 230
WERAM-Anc-0080 ENSACAP00000007637.2 Anolis carolinensis 71 1e-30 131
WERAM-Pes-0116 ENSPSIP00000013945.1 Pelodiscus sinensis 70 2e-30 130
WERAM-Aim-0120 ENSAMEP00000011388.1 Ailuropoda melanoleuca 70 2e-30 130
WERAM-Dan-0191 ENSDNOP00000026605.1 Dasypus novemcinctus 70 3e-30 130
WERAM-Fec-0174 ENSFCAP00000024437.1 Felis catus 70 3e-30 130
WERAM-Mup-0151 ENSMPUP00000013148.1 Mustela putorius furo 70 3e-30 130
WERAM-Dio-0093 ENSDORP00000009462.1 Dipodomys ordii 70 3e-30 130
WERAM-Tut-0014 ENSTTRP00000001188.1 Tursiops truncatus 70 4e-30 130
WERAM-Caf-0017 ENSCAFP00000001948.3 Canis familiaris 70 4e-30 129
WERAM-Mam-0061 ENSMMUP00000010301.2 Macaca mulatta 70 5e-30 129
WERAM-Ova-0175 ENSOARP00000017609.1 Ovis aries 70 1e-29 128
WERAM-Gaga-0164 ENSGALP00000037077.2 Gallus gallus 68 9e-29 125
WERAM-Loa-0080 ENSLAFP00000006257.4 Loxodonta africana 52 9e-29 125
WERAM-Ect-0084 ENSETEP00000009565.1 Echinops telfairi 52 9e-29 125
WERAM-Cap-0201 ENSCPOP00000016560.1 Cavia porcellus 52 1e-28 125
WERAM-Poa-0210 ENSPPYP00000024136.1 Pongo abelii 52 1e-28 125
WERAM-Eqc-0159 ENSECAP00000016784.1 Equus caballus 52 1e-28 125
WERAM-Caj-0191 ENSCJAP00000032804.1 Callithrix jacchus 52 1e-28 125
WERAM-Tub-0039 ENSTBEP00000004995.1 Tupaia belangeri 68 1e-28 124
WERAM-Nol-0003 ENSNLEP00000000196.1 Nomascus leucogenys 51 2e-28 124
WERAM-Myl-0216 ENSMLUP00000018435.1 Myotis lucifugus 68 3e-28 124
WERAM-Prc-0153 ENSPCAP00000014543.1 Procavia capensis 68 3e-28 123
WERAM-Mod-0074 ENSMODP00000011965.2 Monodelphis domestica 67 4e-28 123
WERAM-Sah-0110 ENSSHAP00000011795.1 Sarcophilus harrisii 57 5e-28 123
WERAM-Ptv-0108 ENSPVAP00000009576.2 Pteropus vampyrus 55 1e-26 118
WERAM-Tag-0129 ENSTGUP00000010594.1 Taeniopygia guttata 67 1e-23 108
WERAM-Ere-0050 ENSEEUP00000004312.1 Erinaceus europaeus 69 1e-22 105
WERAM-Ora-0048 ENSOANP00000007669.2 Ornithorhynchus anatinus 66 3e-18 90.9
WERAM-Zem-0068 GRMZM2G117100_P01 Zea mays 45 4e-12 70.5
WERAM-Sei-0132 Si036395m Setaria italica 53 7e-10 62.8
WERAM-Mim-0066 ENSMICP00000006372.1 Microcebus murinus 43 1e-08 58.9
WERAM-Orc-0176 ENSOCUP00000020504.2 Oryctolagus cuniculus 43 1e-08 58.9
WERAM-Vip-0106 ENSVPAP00000009695.1 Vicugna pacos 43 1e-08 58.9
WERAM-Chh-0115 ENSCHOP00000012258.1 Choloepus hoffmanni 43 1e-08 58.9
WERAM-Soa-0076 ENSSARP00000007237.1 Sorex araneus 43 1e-08 58.9
WERAM-Ocp-0110 ENSOPRP00000010669.1 Ochotona princeps 43 1e-08 58.5
Created Date 25-Jun-2016