WERAM Information

Tag Content
WERAM ID WERAM-Ran-0164
Ensembl Protein ID ENSRNOP00000031061.2
Gene Name Trim28
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000027487.2 ENSRNOT00000029996.2 ENSRNOP00000031061.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 6.20e-18 65.2 705 784
Organism Rattus norvegicus
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt   2 ehevsepF..repvdpq.leipdYydiikeP...mdLstikerleegn...YsspeefvkDvrlifnNakaynenkssvq 72 
                           +++v+ ++  +ep++p  ++++d++++ ++P   +dL++i++rl+e+    Yssp+ef++Dv ++f+++++++e+k++vq
  ENSRNOP00000031061.2 705 CERVLLALfcHEPCRPLhQLATDSTFSMEQPggtLDLTLIRARLQEKLsppYSSPQEFAQDVGRMFKQFNKLTEDKADVQ 784
                           6666666669*******************************************************************997 PP
Protein Sequence
(Fasta)		MAASAAAATA AASAATAASA ASGSPGSGEG SAGGEKRPAA SSAAAASASA SSPAGGGGEA 60
QELLEHCGVC RERLRPERDP RLLPCLHSAC SACLGPATPA AANNSGDGGS AGDGAMVDCP 120
VCKQQCYSKD IVENYFMRDS GSKASSDSQD ANQCCTSCED NAPATSYCVE CSEPLCETCV 180
EAHQRVKYTK DHTVRSTGPA KTRDGERTVY CNVHKHEPLV LFCESCDTLT CRDCQLNAHK 240
DHQYQFLEDA VRNQRKLLAS LVKRLGDKHA TLQKNTKEVR SSIRQVSDVQ KRVQVDVKMA 300
ILQIMKELNK RGRVLVNDAQ KVTEGQQERL ERQHWTMTKI QKHQEHILRF ASWALESDNN 360
TALLLSKKLI YFQLHRALKM IVDPVEPHGE MKFQWDLNAW TKSAEAFGKI VAERPGTNST 420
GPGPMAPPRA PGPLSKQGSG SSQPMEVQEG YGFGTDDPYS SAEPHVSGMK RSRSGEGEVS 480
GLMRKVPRVS LERLDLDLTS DSQPPVFKVF PGSTTEDYNL IVIERGAAAA AAGQAGTVPP 540
GAPGAPPLPG MAIVKEEETE AAIGAPPAAP EGPETKPVLM ALTEGPGAEG PRLASPSGST 600
SSGLEVVAPE VTSAPVSGPG ILDDSATICR VCQKPGDLVM CNQCEFCFHL DCHLPSLQDV 660
PGEEWSCSLC HVLPDLKEED GSLSLDGADS TGVVAKLSPA NQRKCERVLL ALFCHEPCRP 720
LHQLATDSTF SMEQPGGTLD LTLIRARLQE KLSPPYSSPQ EFAQDVGRMF KQFNKLTEDK 780
ADVQSIIGLQ RFFETRMNDA FGDTKFSAVL VEPPPLNLPS AGLSSQELSG PGDGP 835
Nucleotide Sequence
(Fasta)		GCGGTTGTTC GCAATTCTTG CGGCGCGAGT CTCAGCAGCA AGGGAGGAGG CGGCGCGGGT 60
GGCGGCGCCG TCGTCTGTAG AGAGGCCGGC AGCCAGCGGC TTGGCCGCAT CTCGGCAGCG 120
CCTGGGGCGC GGCGGGCGTC GGCCCAGGAG ACGCGTGGCG GCGCTCGGCC TCGCGGCATC 180
GGCGGCTGCC TGGCCGTTGG CGGCGAGCGC ACTTGCGCCT GCGCAGCGGG CTCGGTGCCC 240
CTCCTCCCCT GGGCGGCCCC CCCAACCCCC CGGCGGCGTG TGAATGGCGG CCTCGGCGGC 300
GGCGGCGACT GCGGCGGCCT CGGCCGCGAC GGCCGCGTCA GCGGCCTCTG GTAGCCCAGG 360
GTCGGGCGAA GGCTCGGCGG GCGGTGAGAA GCGCCCCGCT GCCTCTTCAG CCGCGGCGGC 420
CTCGGCCTCC GCGTCGTCCC CTGCGGGGGG CGGTGGCGAG GCGCAGGAGC TTTTGGAGCA 480
CTGCGGCGTG TGTCGCGAGC GCTTGCGGCC TGAGCGGGAT CCTCGGCTGC TGCCCTGTCT 540
GCATTCGGCC TGTAGTGCCT GCCTTGGCCC CGCTACACCC GCCGCAGCTA ATAATTCGGG 600
GGATGGCGGC TCGGCGGGCG ACGGCGCTAT GGTGGATTGT CCAGTGTGCA AACAACAGTG 660
CTACTCCAAA GACATCGTGG AGAATTACTT TATGCGTGAT AGTGGCAGTA AGGCCTCTTC 720
TGATTCCCAG GATGCTAACC AGTGCTGCAC TAGCTGTGAA GATAACGCCC CAGCCACTAG 780
CTATTGTGTG GAGTGCTCTG AACCACTGTG TGAGACCTGT GTGGAGGCTC ACCAGCGGGT 840
GAAATACACC AAGGATCACA CTGTGCGCTC CACGGGTCCT GCTAAGACTC GAGATGGAGA 900
ACGAACAGTC TATTGTAATG TGCACAAGCA TGAACCCCTT GTGCTGTTTT GTGAGAGCTG 960
TGACACGCTC ACTTGCCGGG ACTGCCAACT CAATGCTCAC AAGGACCACC AGTACCAATT 1020
CTTGGAAGAT GCAGTAAGGA ACCAACGTAA ACTCTTGGCT TCACTGGTGA AACGTCTTGG 1080
GGACAAACAT GCCACACTGC AGAAAAACAC CAAGGAGGTT CGAAGCTCGA TCCGCCAGGT 1140
GTCTGATGTG CAGAAGCGAG TGCAGGTTGA TGTGAAGATG GCCATTCTGC AGATCATGAA 1200
GGAGCTGAAT AAACGGGGAC GAGTTCTGGT CAATGATGCC CAGAAGGTGA CTGAGGGTCA 1260
GCAGGAACGT CTGGAGCGTC AGCACTGGAC CATGACCAAA ATCCAGAAGC ACCAGGAACA 1320
CATTTTGCGC TTTGCCTCTT GGGCTTTGGA GAGTGATAAC AATACAGCCC TCTTGCTCTC 1380
TAAGAAGCTG ATTTATTTCC AGCTGCATCG GGCCCTCAAA ATGATTGTGG ATCCTGTGGA 1440
GCCTCATGGT GAGATGAAGT TTCAGTGGGA TCTCAATGCC TGGACCAAGA GTGCTGAAGC 1500
CTTTGGTAAG ATTGTGGCTG AGCGTCCTGG TACAAACTCC ACGGGTCCTG GGCCCATGGC 1560
TCCTCCAAGA GCCCCAGGCC CCCTAAGCAA GCAAGGTTCT GGTAGTAGCC AGCCCATGGA 1620
AGTACAAGAG GGCTATGGCT TTGGGACAGA TGATCCCTAC TCAAGTGCAG AGCCACATGT 1680
ATCAGGCATG AAGCGGTCCC GCTCTGGTGA GGGAGAAGTA AGTGGCCTCA TGAGGAAGGT 1740
GCCACGTGTG AGCCTTGAAC GCCTGGATCT GGATCTCACC TCTGATAGCC AGCCACCAGT 1800
CTTCAAGGTC TTTCCTGGAA GCACCACTGA GGACTACAAT CTAATTGTTA TTGAGCGTGG 1860
TGCTGCTGCA GCAGCCGCTG GCCAGGCTGG GACTGTGCCA CCAGGAGCCC CTGGTGCCCC 1920
ACCCCTGCCT GGCATGGCCA TTGTCAAGGA AGAAGAGACA GAAGCTGCTA TTGGAGCCCC 1980
TCCTGCTGCC CCTGAGGGGC CTGAAACCAA GCCTGTGTTG ATGGCTCTGA CTGAAGGCCC 2040
TGGGGCTGAG GGACCTCGTC TAGCTTCACC TAGTGGCAGT ACCAGCTCAG GCTTGGAGGT 2100
GGTAGCTCCT GAGGTTACCT CAGCCCCAGT AAGTGGGCCA GGTATCCTGG ATGACAGTGC 2160
CACTATCTGC CGTGTATGCC AGAAGCCAGG TGACCTGGTC ATGTGCAACC AGTGCGAGTT 2220
TTGCTTCCAC CTGGATTGTC ACCTCCCTTC CCTGCAGGAT GTTCCAGGGG AGGAATGGAG 2280
TTGCTCACTC TGCCACGTGC TCCCTGATCT AAAGGAGGAA GATGGAAGCC TTAGCTTGGA 2340
TGGAGCAGAT AGCACTGGTG TGGTAGCTAA ACTCTCACCA GCCAACCAGC GGAAATGTGA 2400
GCGTGTTCTG CTGGCCCTTT TCTGCCATGA ACCGTGCCGC CCCTTGCATC AGCTGGCTAC 2460
CGACTCTACA TTCTCCATGG AGCAGCCTGG TGGTACCCTA GACCTGACCT TGATTCGTGC 2520
TCGCCTCCAA GAGAAGCTGT CACCTCCTTA TAGCTCCCCC CAGGAGTTTG CCCAGGATGT 2580
GGGCCGCATG TTCAAACAGT TCAATAAGCT GACTGAGGAC AAGGCAGATG TTCAGTCCAT 2640
CATCGGCCTC CAGCGCTTCT TTGAGACACG AATGAATGAT GCCTTTGGTG ACACCAAGTT 2700
TTCTGCTGTG CTGGTAGAAC CACCACCACT GAACCTTCCC AGTGCTGGCC TAAGTTCTCA 2760
GGAGCTGTCT GGTCCTGGTG ATGGCCCCTG AAGCTGGGGC TCTTGTGGTC AGCCCAGTCC 2820
AGCTCTGGTC TCTGTATTTT CAACCCATAC CCTGTCCTTC CTCTGGTGGC CTGACTACCT 2880
GTTCTTGCTG GCCCCATCCC TCAGTCCCTC CTCACAAAAT GGTTTTTACT TCTGTGGATT 2940
TAATAAAAAC TTCACTGAGT CAGTCGCTC
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0015 ENSMUSP00000005705.7 Mus musculus 99 0.0 1368
WERAM-Ict-0159 ENSSTOP00000017511.1 Ictidomys tridecemlineatus 96 0.0 1325
WERAM-Hos-0120 ENSP00000253024.4 Homo sapiens 95 0.0 1322
WERAM-Paa-0099 ENSPANP00000001565.1 Papio anubis 95 0.0 1321
WERAM-Chs-0017 ENSCSAP00000016435.1 Chlorocebus sabaeus 95 0.0 1321
WERAM-Aim-0085 ENSAMEP00000007951.1 Ailuropoda melanoleuca 95 0.0 1318
WERAM-Orc-0163 ENSOCUP00000014282.2 Oryctolagus cuniculus 94 0.0 1315
WERAM-Ptv-0160 ENSPVAP00000013180.1 Pteropus vampyrus 95 0.0 1312
WERAM-Otg-0221 ENSOGAP00000018045.1 Otolemur garnettii 93 0.0 1307
WERAM-Caf-0029 ENSCAFP00000003412.4 Canis familiaris 94 0.0 1305
WERAM-Ova-0030 ENSOARP00000004219.1 Ovis aries 94 0.0 1303
WERAM-Gog-0147 ENSGGOP00000013024.2 Gorilla gorilla 94 0.0 1303
WERAM-Mam-0187 ENSMMUP00000026375.2 Macaca mulatta 95 0.0 1302
WERAM-Loa-0188 ENSLAFP00000022715.1 Loxodonta africana 93 0.0 1296
WERAM-Ocp-0151 ENSOPRP00000015562.1 Ochotona princeps 93 0.0 1288
WERAM-Tut-0023 ENSTTRP00000001873.1 Tursiops truncatus 95 0.0 1287
WERAM-Cap-0067 ENSCPOP00000005181.2 Cavia porcellus 92 0.0 1285
WERAM-Dio-0055 ENSDORP00000005088.1 Dipodomys ordii 94 0.0 1275
WERAM-Bot-0067 ENSBTAP00000008424.5 Bos taurus 94 0.0 1274
WERAM-Myl-0157 ENSMLUP00000013021.2 Myotis lucifugus 93 0.0 1271
WERAM-Mup-0087 ENSMPUP00000008211.1 Mustela putorius furo 96 0.0 1260
WERAM-Prc-0074 ENSPCAP00000006707.1 Procavia capensis 94 0.0 1259
WERAM-Fec-0043 ENSFCAP00000003461.2 Felis catus 96 0.0 1253
WERAM-Dan-0038 ENSDNOP00000003891.2 Dasypus novemcinctus 95 0.0 1222
WERAM-Nol-0117 ENSNLEP00000013612.1 Nomascus leucogenys 88 0.0 1195
WERAM-Caj-0110 ENSCJAP00000019522.1 Callithrix jacchus 85 0.0 1192
WERAM-Mae-0121 ENSMEUP00000012357.1 Macropus eugenii 78 0.0 1013
WERAM-Ere-0105 ENSEEUP00000011509.1 Erinaceus europaeus 85 0.0 926
WERAM-Pes-0132 ENSPSIP00000015657.1 Pelodiscus sinensis 68 0.0 897
WERAM-Sah-0050 ENSSHAP00000005569.1 Sarcophilus harrisii 74 0.0 803
WERAM-Eqc-0070 ENSECAP00000008770.1 Equus caballus 88 0.0 701
WERAM-Anc-0111 ENSACAP00000010492.2 Anolis carolinensis 72 0.0 640
WERAM-Pat-0093 ENSPTRP00000048454.2 Pan troglodytes 98 0.0 639
WERAM-Mim-0028 ENSMICP00000002763.1 Microcebus murinus 91 1e-172 604
WERAM-Xet-0120 ENSXETP00000041702.2 Xenopus tropicalis 65 2e-165 580
WERAM-Ect-0044 ENSETEP00000004682.1 Echinops telfairi 67 2e-141 500
WERAM-Lac-0052 ENSLACP00000007218.1 Latimeria chalumnae 53 3e-126 450
WERAM-Soa-0013 ENSSARP00000001458.1 Sorex araneus 95 3e-93 340
WERAM-Fia-0157 ENSFALP00000013428.1 Ficedula albicollis 45 3e-91 334
WERAM-Mod-0002 ENSMODP00000000527.3 Monodelphis domestica 43 2e-75 281
WERAM-Anp-0085 ENSAPLP00000010241.1 Anas platyrhynchos 43 3e-75 281
WERAM-Poa-0007 ENSPPYP00000001169.2 Pongo abelii 43 3e-75 280
WERAM-Gaga-0021 ENSGALP00000003066.4 Gallus gallus 43 4e-75 280
WERAM-Tas-0025 ENSTSYP00000002916.1 Tarsius syrichta 44 5e-75 280
WERAM-Sus-0170 ENSSSCP00000021501.1 Sus scrofa 43 3e-74 277
WERAM-Leo-0095 ENSLOCP00000012853.1 Lepisosteus oculatus 42 5e-74 276
WERAM-Chh-0017 ENSCHOP00000001525.1 Choloepus hoffmanni 44 3e-73 274
WERAM-Gam-0174 ENSGMOP00000017205.1 Gadus morhua 42 2e-72 271
WERAM-Gaa-0050 ENSGACP00000006576.1 Gasterosteus aculeatus 41 9e-72 269
WERAM-Orn-0109 ENSONIP00000011616.1 Oreochromis niloticus 40 1e-71 269
WERAM-Orla-0005 ENSORLP00000000400.1 Oryzias latipes 41 1e-71 268
WERAM-Asm-0128 ENSAMXP00000012606.1 Astyanax mexicanus 41 4e-71 267
WERAM-Dar-0038 ENSDARP00000025140.8 Danio rerio 40 1e-70 265
WERAM-Pof-0128 ENSPFOP00000011263.2 Poecilia formosa 40 2e-70 265
WERAM-Tar-0093 ENSTRUP00000018722.1 Takifugu rubripes 40 2e-70 265
WERAM-Xim-0046 ENSXMAP00000004390.1 Xiphophorus maculatus 39 5e-70 263
WERAM-Tag-0149 ENSTGUP00000012648.1 Taeniopygia guttata 40 3e-68 257
WERAM-Vip-0082 ENSVPAP00000007497.1 Vicugna pacos 40 6e-68 256
WERAM-Meg-0128 ENSMGAP00000013880.2 Meleagris gallopavo 40 4e-67 253
WERAM-Ten-0081 ENSTNIP00000009576.1 Tetraodon nigroviridis 36 3e-61 234
WERAM-Tub-0017 ENSTBEP00000001699.1 Tupaia belangeri 38 3e-57 221
WERAM-Ora-0046 ENSOANP00000007156.1 Ornithorhynchus anatinus 41 2e-45 182
WERAM-Drm-0020 FBpp0083320 Drosophila melanogaster 32 9e-41 166
WERAM-Cii-0027 ENSCINP00000010542.3 Ciona intestinalis 30 7e-31 133
Created Date 25-Jun-2016