WERAM Information

Tag Content
WERAM ID WERAM-Prc-0074
Ensembl Protein ID ENSPCAP00000006707.1
Gene Name TRIM28
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPCAG00000007149.1 ENSPCAT00000007167.1 ENSPCAP00000006707.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 3.60e-19 68.3 590 669
Organism Procavia capensis
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt   2 ehevsepF..repvdpq.leipdYydiikeP...mdLstikerleegn...YsspeefvkDvrlifnNakaynenkssvq 72 
                           +++v+ ++  +ep++p  ++++d+++++++P   +dL++i++rl+e+    Yssp+ef++Dv ++f+++++++e+k++vq
  ENSPCAP00000006707.1 590 CERVLLALfcHEPCRPLhQLATDSTFSLDQPggtLDLTLIRARLQEKLsppYSSPQEFAQDVGRMFKQFNKLTEDKADVQ 669
                           6666666669*******************************************************************997 PP
Protein Sequence
(Fasta)		VDCPVCKQQC FYKDIVENYF MRDSGSKTAT DAQDANQCCT SCEDNAPATS YCVECSEPLC 60
ETCVEAHQRV KYTKDHTVRS TGPAKTRDGE RTVYCSVHKH EPLVLFCESC DTLTCRDCQL 120
NAHKDHQYQF LEDAVRNQRK LLASLVKRLG DKHATLQKST KEVRSIRHVS DVQKRVQVDV 180
KMAILQIMKE LNKRGRVLVN DAQKVTEGQQ ERLERQHWTM TKIQKHQEHI LRFASWALES 240
DNNTALLLSK KLIYFQLHRA LKMIVDPVEP HGEMKFQWDL NAWTKSAEAF GKIVAERSGT 300
NSTGPAPMAP PRAPGPLSKQ GSGSSQPMEV QEGYGFGSVD DPYSSAEPHV SGVKRSRSGE 360
GEVSGLMRKV PRVSLERLDL DLTADSQPPV FKVFPGNTTE DYNLIVIERG GAAAAAAGQP 420
GTAPPGAPGA PPLPGMAIVK EEETEAAIGA PPAAAEGPET KPVLMALAEG PGAEGPRLAS 480
PSGSTSSGLE VVAPEGASAP SGGPGTLDDS ATICRVCQKP GDLVMCNQCE FCFHLDCHLP 540
ALQDVPGEEW SCSLCHVLPD LKEEDGSLNL DEADTTGVVA KLSPANQRKC ERVLLALFCH 600
EPCRPLHQLA TDSTFSLDQP GGTLDLTLIR ARLQEKLSPP YSSPQEFAQD VGRMFKQFNK 660
LTEDKADVQS IIGLQRFFET RMNEAFGDTK FSAVLVEPPP LSLPGAGLGA PELPGGPSDG 720
L 721
Nucleotide Sequence
(Fasta)		GTGGATTGTC CTGTCTGCAA ACAGCAATGC TTCTACAAAG ACATTGTGGA GAACTACTTC 60
ATGCGTGATA GTGGTAGCAA GACTGCCACC GACGCCCAGG ATGCTAATCA GTGCTGCACC 120
AGCTGTGAGG ATAACGCTCC TGCCACTAGC TACTGCGTTG AGTGCTCCGA ACCGTTGTGT 180
GAGACTTGCG TGGAGGCACA CCAGCGAGTG AAGTACACCA AGGACCACAC CGTGCGATCC 240
ACCGGGCCAG CGAAGACACG AGATGGCGAG CGCACTGTGT ATTGCAGTGT ACATAAGCAT 300
GAGCCACTTG TGCTGTTTTG TGAGAGTTGT GACACTCTGA CCTGCCGGGA CTGCCAGCTC 360
AATGCCCACA AGGACCATCA GTACCAGTTC CTGGAGGATG CAGTGAGGAA CCAGCGCAAA 420
CTCCTAGCCT CGTTGGTGAA GCGCCTTGGG GACAAGCATG CCACATTGCA GAAGAGCACC 480
AAGGAGGTTC GCAGCATTCG TCATGTGTCA GATGTCCAGA AGCGTGTGCA GGTGGATGTC 540
AAGATGGCCA TCCTGCAGAT CATGAAAGAG TTGAACAAAC GGGGCCGTGT GCTGGTCAAT 600
GATGCCCAGA AGGTGACTGA GGGGCAGCAG GAGCGGCTGG AGCGCCAGCA CTGGACCATG 660
ACCAAGATCC AGAAACACCA GGAACACATC TTGCGTTTTG CCTCTTGGGC CCTGGAAAGT 720
GACAATAACA CAGCCCTGCT GCTCTCCAAG AAGCTGATCT ACTTCCAGCT GCACCGTGCC 780
CTCAAGATGA TTGTGGACCC CGTGGAGCCT CATGGCGAGA TGAAATTCCA GTGGGACCTC 840
AATGCTTGGA CCAAGAGTGC TGAGGCCTTT GGCAAGATCG TGGCAGAGCG CTCGGGCACC 900
AACTCTACAG GGCCTGCACC CATGGCCCCC CCGCGGGCCC CTGGCCCACT GAGCAAGCAG 960
GGCTCAGGCA GCAGCCAGCC CATGGAGGTA CAAGAAGGCT ACGGCTTTGG GTCAGTAGAT 1020
GACCCCTACT CGAGTGCGGA GCCTCATGTA TCGGGTGTGA AGCGATCCCG CTCTGGTGAG 1080
GGTGAAGTGA GTGGCCTCAT GCGCAAGGTA CCACGGGTGA GTCTTGAGCG CCTGGACTTG 1140
GACCTCACAG CTGACAGCCA GCCACCTGTA TTCAAGGTGT TCCCAGGCAA CACCACAGAG 1200
GACTACAATC TCATTGTCAT TGAACGTGGT GGTGCTGCTG CTGCGGCTGC AGGACAGCCA 1260
GGAACTGCGC CCCCTGGGGC CCCTGGAGCC CCGCCCTTGC CTGGCATGGC CATTGTCAAG 1320
GAAGAAGAGA CAGAGGCAGC CATTGGAGCA CCACCTGCAG CTGCAGAAGG CCCTGAGACC 1380
AAGCCTGTGC TTATGGCCCT GGCAGAGGGT CCTGGTGCAG AGGGCCCCCG CTTGGCCTCA 1440
CCCAGTGGTA GCACCAGCTC AGGCCTGGAG GTGGTGGCCC CTGAAGGTGC CTCAGCCCCA 1500
TCAGGTGGTC CAGGCACCCT GGATGACAGT GCCACCATTT GTCGCGTCTG CCAGAAGCCA 1560
GGTGACCTGG TCATGTGCAA CCAGTGCGAG TTTTGCTTCC ACCTGGACTG TCACCTGCCA 1620
GCTCTGCAAG ATGTGCCAGG GGAAGAGTGG AGCTGTTCAC TCTGCCATGT GCTCCCTGAC 1680
CTGAAAGAGG AGGATGGGAG TCTCAATCTG GATGAGGCTG ACACCACCGG TGTGGTGGCC 1740
AAGCTTTCAC CAGCCAACCA GCGGAAATGT GAGCGTGTCC TGCTGGCCTT GTTTTGCCAC 1800
GAGCCATGCC GTCCCCTGCA CCAGTTGGCC ACTGATTCCA CCTTCTCCCT GGACCAGCCT 1860
GGTGGTACTT TAGACTTGAC GCTGATTCGT GCCCGTCTCC AGGAGAAATT GTCTCCTCCC 1920
TATAGCTCCC CCCAGGAATT TGCCCAGGAT GTGGGCCGCA TGTTCAAGCA GTTCAACAAA 1980
CTGACAGAGG ACAAGGCTGA TGTGCAGTCC ATCATCGGCC TGCAACGGTT TTTTGAGACA 2040
CGCATGAATG AAGCCTTTGG CGACACCAAG TTCTCAGCTG TGCTGGTCGA GCCCCCGCCG 2100
CTGAGCCTAC CTGGTGCTGG CCTGGGGGCC CCGGAGCTGC CCGGTGGCCC CAGTGATGGT 2160
CTCTGA 2167
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mam-0187 ENSMMUP00000026375.2 Macaca mulatta 97 0.0 1250
WERAM-Hos-0120 ENSP00000253024.4 Homo sapiens 97 0.0 1246
WERAM-Gog-0147 ENSGGOP00000013024.2 Gorilla gorilla 97 0.0 1245
WERAM-Loa-0188 ENSLAFP00000022715.1 Loxodonta africana 98 0.0 1243
WERAM-Paa-0099 ENSPANP00000001565.1 Papio anubis 97 0.0 1240
WERAM-Chs-0017 ENSCSAP00000016435.1 Chlorocebus sabaeus 97 0.0 1240
WERAM-Ocp-0151 ENSOPRP00000015562.1 Ochotona princeps 94 0.0 1239
WERAM-Orc-0163 ENSOCUP00000014282.2 Oryctolagus cuniculus 97 0.0 1236
WERAM-Tut-0023 ENSTTRP00000001873.1 Tursiops truncatus 97 0.0 1232
WERAM-Aim-0085 ENSAMEP00000007951.1 Ailuropoda melanoleuca 97 0.0 1230
WERAM-Ptv-0160 ENSPVAP00000013180.1 Pteropus vampyrus 97 0.0 1228
WERAM-Otg-0221 ENSOGAP00000018045.1 Otolemur garnettii 95 0.0 1226
WERAM-Ran-0164 ENSRNOP00000031061.2 Rattus norvegicus 95 0.0 1220
WERAM-Dio-0055 ENSDORP00000005088.1 Dipodomys ordii 94 0.0 1220
WERAM-Ict-0159 ENSSTOP00000017511.1 Ictidomys tridecemlineatus 96 0.0 1219
WERAM-Caf-0029 ENSCAFP00000003412.4 Canis familiaris 96 0.0 1219
WERAM-Mum-0015 ENSMUSP00000005705.7 Mus musculus 95 0.0 1218
WERAM-Bot-0067 ENSBTAP00000008424.5 Bos taurus 96 0.0 1216
WERAM-Ova-0030 ENSOARP00000004219.1 Ovis aries 95 0.0 1212
WERAM-Myl-0157 ENSMLUP00000013021.2 Myotis lucifugus 92 0.0 1203
WERAM-Cap-0067 ENSCPOP00000005181.2 Cavia porcellus 93 0.0 1198
WERAM-Mup-0087 ENSMPUP00000008211.1 Mustela putorius furo 96 0.0 1190
WERAM-Fec-0043 ENSFCAP00000003461.2 Felis catus 97 0.0 1185
WERAM-Dan-0038 ENSDNOP00000003891.2 Dasypus novemcinctus 96 0.0 1165
WERAM-Caj-0110 ENSCJAP00000019522.1 Callithrix jacchus 87 0.0 1127
WERAM-Nol-0117 ENSNLEP00000013612.1 Nomascus leucogenys 88 0.0 1123
WERAM-Mae-0121 ENSMEUP00000012357.1 Macropus eugenii 78 0.0 1012
WERAM-Ere-0105 ENSEEUP00000011509.1 Erinaceus europaeus 85 0.0 891
WERAM-Pes-0132 ENSPSIP00000015657.1 Pelodiscus sinensis 68 0.0 884
WERAM-Anc-0111 ENSACAP00000010492.2 Anolis carolinensis 64 0.0 845
WERAM-Sah-0050 ENSSHAP00000005569.1 Sarcophilus harrisii 76 0.0 794
WERAM-Eqc-0070 ENSECAP00000008770.1 Equus caballus 87 0.0 681
WERAM-Pat-0093 ENSPTRP00000048454.2 Pan troglodytes 98 0.0 633
WERAM-Mim-0028 ENSMICP00000002763.1 Microcebus murinus 94 3e-165 579
WERAM-Lac-0052 ENSLACP00000007218.1 Latimeria chalumnae 44 4e-159 559
WERAM-Xet-0120 ENSXETP00000041702.2 Xenopus tropicalis 68 1e-158 557
WERAM-Ect-0044 ENSETEP00000004682.1 Echinops telfairi 68 8e-133 471
WERAM-Fia-0157 ENSFALP00000013428.1 Ficedula albicollis 46 2e-94 344
WERAM-Soa-0013 ENSSARP00000001458.1 Sorex araneus 97 1e-81 302
WERAM-Mod-0002 ENSMODP00000000527.3 Monodelphis domestica 43 5e-73 273
WERAM-Anp-0085 ENSAPLP00000010241.1 Anas platyrhynchos 43 5e-73 273
WERAM-Poa-0007 ENSPPYP00000001169.2 Pongo abelii 43 1e-72 272
WERAM-Gaga-0021 ENSGALP00000003066.4 Gallus gallus 43 2e-72 271
WERAM-Tas-0025 ENSTSYP00000002916.1 Tarsius syrichta 43 2e-72 271
WERAM-Sus-0170 ENSSSCP00000021501.1 Sus scrofa 43 5e-72 270
WERAM-Leo-0095 ENSLOCP00000012853.1 Lepisosteus oculatus 43 6e-72 269
WERAM-Chh-0017 ENSCHOP00000001525.1 Choloepus hoffmanni 43 9e-71 265
WERAM-Gam-0174 ENSGMOP00000017205.1 Gadus morhua 43 3e-70 263
WERAM-Dar-0038 ENSDARP00000025140.8 Danio rerio 42 7e-70 262
WERAM-Orla-0005 ENSORLP00000000400.1 Oryzias latipes 42 1e-69 261
WERAM-Orn-0109 ENSONIP00000011616.1 Oreochromis niloticus 41 2e-69 261
WERAM-Asm-0128 ENSAMXP00000012606.1 Astyanax mexicanus 42 4e-69 260
WERAM-Tar-0093 ENSTRUP00000018722.1 Takifugu rubripes 41 6e-69 259
WERAM-Gaa-0050 ENSGACP00000006576.1 Gasterosteus aculeatus 42 7e-69 259
WERAM-Pof-0192 ENSPFOP00000016145.2 Poecilia formosa 40 4e-67 253
WERAM-Xim-0152 ENSXMAP00000012685.1 Xiphophorus maculatus 40 5e-67 253
WERAM-Tag-0149 ENSTGUP00000012648.1 Taeniopygia guttata 39 8e-66 249
WERAM-Vip-0082 ENSVPAP00000007497.1 Vicugna pacos 40 1e-65 248
WERAM-Meg-0128 ENSMGAP00000013880.2 Meleagris gallopavo 39 7e-65 246
WERAM-Ten-0081 ENSTNIP00000009576.1 Tetraodon nigroviridis 35 5e-57 219
WERAM-Tub-0017 ENSTBEP00000001699.1 Tupaia belangeri 37 8e-55 213
WERAM-Ora-0046 ENSOANP00000007156.1 Ornithorhynchus anatinus 41 2e-44 178
WERAM-Drm-0020 FBpp0083320 Drosophila melanogaster 32 1e-38 159
WERAM-Cii-0027 ENSCINP00000010542.3 Ciona intestinalis 33 1e-28 125
Created Date 25-Jun-2016