Tag |
Content |
WERAM ID |
WERAM-Hos-0270 |
Ensembl Protein ID |
ENSP00000478171.1 |
Uniprot Accession |
Q96T88; UHRF1_HUMAN; A0JBR2; A8K024; B2RBA9; Q2HIX7; Q8J022; Q9H6S6; Q9P115; Q9P1U7 |
Genbank Protein ID |
NP_001041666.1; NP_001276979.1; NP_001276980.1; NP_001276981.1; NP_037414.3 |
Protein Name |
E3 ubiquitin-protein ligase UHRF1 |
Genbank Nucleotide ID |
NM_001048201.2; NM_001290050.1; NM_001290051.1; NM_001290052.1; NM_013282.4 |
Gene Name |
UHRF1;ICBP90;NP95;RNF106 |
Ensembl Information |
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Details |
Type |
Family |
Domain |
Substrates |
AA |
References (PMIDs) |
Me_Reader |
PHD |
PHD-type |
H3K4me0; H3K9me3; H3R2me0 |
K,R |
23161542 |
Me_Reader |
Tudor |
Tudor |
H3K4me0; H3K9me3; H3R2me0 |
K,R |
23161542 |
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Status |
Reviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
Me_Reader |
Tudor |
1.60e-29 |
104.2 |
199 |
346 |
Me_Reader |
PHD |
4.70e-10 |
41.8 |
381 |
429 |
|
Organism |
Homo sapiens |
NCBI Taxa ID |
9606 |
Functional Description (View)Functional Description
Multidomain protein that acts as a key epigenetic regulator by bridging DNA methylation and chromatin modification. Specifically recognizes and binds hemimethylated DNA at replication forks via its YDG domain and recruits DNMT1 methyltransferase to ensure faithful propagation of the DNA methylation patterns through DNA replication. In addition to its role in maintenance of DNA methylation, also plays a key role in chromatin modification: through its tudor-like regions and PHD-type zinc fingers, specifically recognizes and binds histone H3 trimethylated at 'Lys-9' (H3K9me3) and unmethylated at 'Arg-2' (H3R2me0), respectively, and recruits chromatin proteins. Enriched in pericentric heterochromatin where it recruits different chromatin modifiers required for this chromatin replication. Also localizes to euchromatic regions where it negatively regulates transcription possibly by impacting DNA methylation and histone modifications. Has E3 ubiquitin-protein ligase activity by mediating the ubiquitination of target proteins such as histone H3 and PML. It is still unclear how E3 ubiquitin-protein ligase activity is related to its role in chromatin in vivo. May be involved in DNA repair. |
Multidomain protein that acts as a key epigenetic regulator by bridging DNA methylation and chromatin modification. Specifically recognizes and binds hemimethylated DNA at replication forks via its YDG domain and recruits DNMT1 methyltransferase to ensure faithful propagation of the DNA methylation patterns through DNA replication. In addition to its role in maintenance of DNA methylation, also plays a key role in chromatin modification: through its tudor-like regions and PHD-type zinc fingers, specifically recognizes and binds histone H3 trimethylated at 'Lys-9' (H3K9me3) and unmethylated at 'Arg-2' (H3R2me0), respectively, and recruits chromatin proteins. Enriched in pericentric heterochromatin where it recruits different chromatin modifiers required for this chromatin replication. Also localizes to euchromatic regions where it negatively regulates transcription possibly by impacting DNA methylation and histone modifications. Has E3 ubiquitin-protein ligase activity by mediating the ubiquitination of target proteins such as histone H3 and PML. It is still unclear how E3 ubiquitin-protein ligase activity is related to its role in chromatin in vivo. May be involved in DNA repair.
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Domain Profile |
Me_Reader Tudor
Tudor.txt 2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyy..............sikyedqrkwyilsLekgnrlreq 61 +kv+++V+a+++++G+++++++V+++++++s++e++ ++ky+d++++ ++++++++ ++++ ENSP00000478171.1 199 YKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCsstsrpaleedviyHVKYDDYPENGVVQMNSRDVRARA 272 9*******************************************************************987765 PP Tudor.txt 2 skvGlrVvakwssdG....yfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlreqyg 63 ++vG+ V+ +++ d+ f+++ +++++++++++e+y+ +++ ++ +++ ++++++++++ ENSP00000478171.1 281 LEVGQVVMLNYNPDNpkerGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIER 346 78*****************66666666***********************************9986 PP
Me_Reader PHD
PHD.txt 3 iClvCg.kddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 C +Cg ++d + k + CdeCd++fH++C+++plss+p++++wyCp+C++ ENSP00000478171.1 381 ACHLCGgRQDPD-K-QLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 429 477775244444.3.799*********************666*******97 PP
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Protein Sequence (Fasta) | MPSFRGKKIR AAGSAAGSVC RAGAPGRTQV RAGSGPRTRF HRHPQPGHAR RQTSCSRRPE 60 SADTMWIQVR TMDGRQTHTV DSLSRLTKVE ELRRKIQELF HVEPGLQRLF YRGKQMEDGH 120 TLFDYEVRLN DTIQLLVRQS LVLPHSTKER DSELSDTDSG CCLGQSESDK SSTHGEAAAE 180 TDSRPADEDM WDETELGLYK VNEYVDARDT NMGAWFEAQV VRVTRKAPSR DEPCSSTSRP 240 ALEEDVIYHV KYDDYPENGV VQMNSRDVRA RARTIIKWQD LEVGQVVMLN YNPDNPKERG 300 FWYDAEISRK RETRTARELY ANVVLGDDSL NDCRIIFVDE VFKIERPGEG SPMVDNPMRR 360 KSGPSCKHCK DDVNRLCRVC ACHLCGGRQD PDKQLMCDEC DMAFHIYCLD PPLSSVPSED 420 EWYCPECRND ASEVVLAGER LRESKKKAKM ASATSSSQRD WGKGMACVGR TKECTIVPSN 480 HYGPIPGIPV GTMWRFRVQV SESGVHRPHV AGIHGRSNDG AYSLVLAGGY EDDVDHGNFF 540 TYTGSGGRDL SGNKRTAEQS CDQKLTNTNR ALALNCFAPI NDQEGAEAKD WRSGKPVRVV 600 RNVKGGKNSK YAPAEGNRYD GIYKVVKYWP EKGKSGFLVW RYLLRRDDDE PGPWTKEGKD 660 RIKKLGLTMQ YPEGYLEALA NREREKENSK REEEEQQEGG FASPRTGKGK WKRKSAGGGP 720 SRAGSPRRTS KKTKVEPYSL TAQQSSLIRE DKSNAKLWNE VLASLKDRPA SGSPFQLFLS 780 KVEETFQCIC CQELVFRPIT TVCQHNVCKD CLDRSFRAQV FSCPACRYDL GRSYAMQVNQ 840 PLQTVLNQLF PGYGNGR 857Protein Fasta Sequence
>ENSP00000478171.1|UHRF1;ICBP90;NP95;RNF106|Homo sapiens MPSFRGKKIRAAGSAAGSVCRAGAPGRTQVRAGSGPRTRFHRHPQPGHARRQTSCSRRPESADTMWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFDYEVRLNDTIQLLVRQSLVLPHSTKERDSELSDTDSGCCLGQSESDKSSTHGEAAAETDSRPADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDASEVVLAGERLRESKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKKLGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTGKGKWKRKSAGGGPSRAGSPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQTVLNQLFPGYGNGR
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Nucleotide Sequence (Fasta) | GCGCCCGCCC CCGGCACGGC CTCCTGCGGC CCCGCAACTC CCAAATGCCG AGTTTTCGCG 60 GGAAAAAAAT CAGAGCAGCT GGCAGCGCGG CGGGCAGCGT TTGCCGAGCG GGCGCTCCGG 120 GTCGCACGCA AGTCCGCGCG GGGTCCGGGC CACGCACGCG GTTTCATCGC CATCCCCAGC 180 CGGGCCACGC GCGCAGGCAG ACAAGCTGTT CGCGGCGACC GGAGAGCGCC GACACCATGT 240 GGATCCAGGT TCGGACCATG GACGGGAGGC AGACCCACAC GGTGGACTCG CTGTCCAGGC 300 TGACCAAGGT GGAGGAGCTG AGGCGGAAGA TCCAGGAGCT GTTCCACGTG GAGCCAGGCC 360 TGCAGAGGCT GTTCTACAGG GGCAAACAGA TGGAGGACGG CCATACCCTC TTCGACTACG 420 AGGTCCGCCT GAATGACACC ATCCAGCTCC TGGTCCGCCA GAGCCTCGTG CTCCCCCACA 480 GCACCAAGGA GCGGGACTCC GAGCTCTCCG ACACCGACTC CGGCTGCTGC CTGGGCCAGA 540 GTGAGTCAGA CAAGTCCTCC ACCCACGGTG AGGCGGCCGC CGAGACTGAC AGCAGGCCAG 600 CCGATGAGGA CATGTGGGAT GAGACGGAAT TGGGGCTGTA CAAGGTCAAT GAGTACGTCG 660 ATGCTCGGGA CACGAACATG GGGGCGTGGT TTGAGGCGCA GGTGGTCAGG GTGACGCGGA 720 AGGCCCCCTC CCGGGACGAG CCCTGCAGCT CCACGTCCAG GCCGGCGCTG GAGGAGGACG 780 TCATTTACCA CGTGAAATAC GACGACTACC CGGAGAACGG CGTGGTCCAG ATGAACTCCA 840 GGGACGTCCG AGCGCGCGCC CGCACCATCA TCAAGTGGCA GGACCTGGAG GTGGGCCAGG 900 TGGTCATGCT CAACTACAAC CCCGACAACC CCAAGGAGCG GGGCTTCTGG TACGACGCGG 960 AGATCTCCAG GAAGCGCGAG ACCAGGACGG CGCGGGAACT CTACGCCAAC GTGGTGCTGG 1020 GGGATGATTC TCTGAACGAC TGTCGGATCA TCTTCGTGGA CGAAGTCTTC AAGATTGAGC 1080 GGCCGGGTGA AGGGAGCCCC ATGGTTGACA ACCCCATGAG ACGGAAGAGC GGGCCGTCCT 1140 GCAAGCACTG CAAGGACGAC GTGAACAGAC TCTGCCGGGT CTGCGCCTGC CACCTGTGCG 1200 GGGGCCGGCA GGACCCCGAC AAGCAGCTCA TGTGCGATGA GTGCGACATG GCCTTCCACA 1260 TCTACTGCCT GGACCCGCCC CTCAGCAGTG TTCCCAGCGA GGACGAGTGG TACTGCCCTG 1320 AGTGCCGGAA TGATGCCAGC GAGGTGGTAC TGGCGGGAGA GCGGCTGAGA GAGAGCAAGA 1380 AGAAGGCGAA GATGGCCTCG GCCACATCGT CCTCACAGCG GGACTGGGGC AAGGGCATGG 1440 CCTGTGTGGG CCGCACCAAG GAATGTACCA TCGTCCCGTC CAACCACTAC GGACCCATCC 1500 CGGGGATCCC CGTGGGCACC ATGTGGCGGT TCCGAGTCCA GGTCAGCGAG TCGGGTGTCC 1560 ATCGGCCCCA CGTGGCTGGC ATACACGGCC GGAGCAACGA CGGAGCGTAC TCCCTAGTCC 1620 TGGCGGGGGG CTATGAGGAT GATGTGGACC ATGGGAATTT TTTCACATAC ACGGGTAGTG 1680 GTGGTCGAGA TCTTTCCGGC AACAAGAGGA CCGCGGAACA GTCTTGTGAT CAGAAACTCA 1740 CCAACACCAA CAGGGCGCTG GCTCTCAACT GCTTTGCTCC CATCAATGAC CAAGAAGGGG 1800 CCGAGGCCAA GGACTGGCGG TCGGGGAAGC CGGTCAGGGT GGTGCGCAAT GTCAAGGGTG 1860 GCAAGAATAG CAAGTACGCC CCCGCTGAGG GCAACCGCTA CGATGGCATC TACAAGGTTG 1920 TGAAATACTG GCCCGAGAAG GGGAAGTCCG GGTTTCTCGT GTGGCGCTAC CTTCTGCGGA 1980 GGGACGATGA TGAGCCTGGC CCTTGGACGA AGGAGGGGAA GGACCGGATC AAGAAGCTGG 2040 GGCTGACCAT GCAGTATCCA GAAGGCTACC TGGAAGCCCT GGCCAACCGA GAGCGAGAGA 2100 AGGAGAACAG CAAGAGGGAG GAGGAGGAGC AGCAGGAGGG GGGCTTCGCG TCCCCCAGGA 2160 CGGGCAAGGG CAAGTGGAAG CGGAAGTCGG CAGGAGGTGG CCCGAGCAGG GCCGGGTCCC 2220 CGCGCCGGAC ATCCAAGAAA ACCAAGGTGG AGCCCTACAG TCTCACGGCC CAGCAGAGCA 2280 GCCTCATCAG AGAGGACAAG AGCAACGCCA AGCTGTGGAA TGAGGTCCTG GCGTCACTCA 2340 AGGACCGGCC GGCGAGCGGC AGCCCGTTCC AGTTGTTCCT GAGTAAAGTG GAGGAGACGT 2400 TCCAGTGTAT CTGCTGTCAG GAGCTGGTGT TCCGGCCCAT CACGACCGTG TGCCAGCACA 2460 ACGTGTGCAA GGACTGCCTG GACAGATCCT TTCGGGCACA GGTGTTCAGC TGCCCTGCCT 2520 GCCGCTACGA CCTGGGCCGC AGCTATGCCA TGCAGGTGAA CCAGCCTCTG CAGACCGTCC 2580 TCAACCAGCT CTTCCCCGGC TACGGCAATG GCCGGTGATC TCCAAGCACT TCTCGACAGG 2640 CGTTTTGCTG AAAACGTGTC GGAGGGCTCG TTCATCGGCA CTGATTTTGT TCTTAGTGGG 2700 CTTAACTTAA ACAGGTAGTG TTTCCTCCGT TCCCTAAAAA GGTTTGTCTT CCTTTTTTTT 2760 TTTATTTTTA TTTTTCAAAT CTATACATTT TCAGGAATTT ATGTATTCTG GCTAAAAGTT 2820 GGACTTCTCA GTATTGTGTT TAGTTCTTTG AAAACATAAA AGCCTGCAAT TTCTCGACAA 2880 AACAACACAA GATTTTTTAA AGATGGAATC AGAAACTACG TGGTGTGGAG GCTGTTGATG 2940 TTTCTGGTGT CAAGTTCTCA GAAGTTGCTG CCACCAACTC TTTAAGAAGG CGACAGGATC 3000 AGTCCTTCTC TCGGGTTCTG GCCCCCAAGG TCAGAGCAAG CATCTTCCTG ACAGCATTTT 3060 GTCATCTAAA GTCCAGTGAC ATGGTTCCCC GTGGTGGCCC GTGGCAGCCC GTGGCATGGC 3120 GTGGCTCAGC TGTCTGTTGA AGTTGTTGCA AGGAAAAGAG GAAACATCTC GGGCCTAGTT 3180 CAAACCTTTG CCTCAAAGCC ATCCCCCACC AGACTGCTTA GCGTCTGAGA TCCGCGTGAA 3240 AAGTCCTCTG CCCACGAGAG CAGGGAGTTG GGGCCACGCA GAAATGGCCT CAAGGGGACT 3300 CTGCTCCACG TGGGGCCAGG CGTGTGACTG ACGCTGTCCG ACGAAGGCGG CCACGGACGG 3360 ACGCCAGCAC ACGAAGTCAC GTGCAAGTGC CTTTGATTCG TTCCTTCTTT CTAAAGACGA 3420 CAGTCTTTGT TGTTAGCACT GAATTATTGA AAATGTCAAC CAGATTCTAG AAACTGCGGT 3480 CATCCAGTTC TTCCTGACAC CGGATGGGTG CTTGGGAACC GTTTGAGCCT TATAGATCAT 3540 TTACATTCAA TTTTTTTAAC TCAGCAAGTG AGAACTTACA AGAGGGTTTT TTTAAAATTT 3600 TTTTTTCTCT TAATGAACAC ATTTTCTAAA TGAATTTTTT TTGTAGTTAC TGTATATGTA 3660 CCAAGAAAGA TATAACGTTA GGGTTTGGTT GTTTTTGTTT TTGTATTTTT TTTCTTTTGA 3720 AAGGGTTTGT TAATTTTTCT AATTTTACCA AAGTTTGCAG CCTATACCTC AATAAAACAG 3780 GGATATTTTA AATCACATAC CTGCAGACAA ACTGGAGCAA TGTTATTTTT AAAGGGTTTT 3840 TTTCACCTCC TTATTCTTAG ATTATTAATG TATTAGGGAA GAATGAGACA ATTTTGTGTA 3900 GGCTTTTTCT AAAGTCCAGT ACTTTGTCCA GATTTTAGAT TCTCAGAATA AATGTTTTTC 3960 ACAGA
3966Nucleotide Fasta Sequence
>ENSP00000478171.1|PHD|Homo sapiens GCGCCCGCCCCCGGCACGGCCTCCTGCGGCCCCGCAACTCCCAAATGCCGAGTTTTCGCGGGAAAAAAATCAGAGCAGCTGGCAGCGCGGCGGGCAGCGTTTGCCGAGCGGGCGCTCCGGGTCGCACGCAAGTCCGCGCGGGGTCCGGGCCACGCACGCGGTTTCATCGCCATCCCCAGCCGGGCCACGCGCGCAGGCAGACAAGCTGTTCGCGGCGACCGGAGAGCGCCGACACCATGTGGATCCAGGTTCGGACCATGGACGGGAGGCAGACCCACACGGTGGACTCGCTGTCCAGGCTGACCAAGGTGGAGGAGCTGAGGCGGAAGATCCAGGAGCTGTTCCACGTGGAGCCAGGCCTGCAGAGGCTGTTCTACAGGGGCAAACAGATGGAGGACGGCCATACCCTCTTCGACTACGAGGTCCGCCTGAATGACACCATCCAGCTCCTGGTCCGCCAGAGCCTCGTGCTCCCCCACAGCACCAAGGAGCGGGACTCCGAGCTCTCCGACACCGACTCCGGCTGCTGCCTGGGCCAGAGTGAGTCAGACAAGTCCTCCACCCACGGTGAGGCGGCCGCCGAGACTGACAGCAGGCCAGCCGATGAGGACATGTGGGATGAGACGGAATTGGGGCTGTACAAGGTCAATGAGTACGTCGATGCTCGGGACACGAACATGGGGGCGTGGTTTGAGGCGCAGGTGGTCAGGGTGACGCGGAAGGCCCCCTCCCGGGACGAGCCCTGCAGCTCCACGTCCAGGCCGGCGCTGGAGGAGGACGTCATTTACCACGTGAAATACGACGACTACCCGGAGAACGGCGTGGTCCAGATGAACTCCAGGGACGTCCGAGCGCGCGCCCGCACCATCATCAAGTGGCAGGACCTGGAGGTGGGCCAGGTGGTCATGCTCAACTACAACCCCGACAACCCCAAGGAGCGGGGCTTCTGGTACGACGCGGAGATCTCCAGGAAGCGCGAGACCAGGACGGCGCGGGAACTCTACGCCAACGTGGTGCTGGGGGATGATTCTCTGAACGACTGTCGGATCATCTTCGTGGACGAAGTCTTCAAGATTGAGCGGCCGGGTGAAGGGAGCCCCATGGTTGACAACCCCATGAGACGGAAGAGCGGGCCGTCCTGCAAGCACTGCAAGGACGACGTGAACAGACTCTGCCGGGTCTGCGCCTGCCACCTGTGCGGGGGCCGGCAGGACCCCGACAAGCAGCTCATGTGCGATGAGTGCGACATGGCCTTCCACATCTACTGCCTGGACCCGCCCCTCAGCAGTGTTCCCAGCGAGGACGAGTGGTACTGCCCTGAGTGCCGGAATGATGCCAGCGAGGTGGTACTGGCGGGAGAGCGGCTGAGAGAGAGCAAGAAGAAGGCGAAGATGGCCTCGGCCACATCGTCCTCACAGCGGGACTGGGGCAAGGGCATGGCCTGTGTGGGCCGCACCAAGGAATGTACCATCGTCCCGTCCAACCACTACGGACCCATCCCGGGGATCCCCGTGGGCACCATGTGGCGGTTCCGAGTCCAGGTCAGCGAGTCGGGTGTCCATCGGCCCCACGTGGCTGGCATACACGGCCGGAGCAACGACGGAGCGTACTCCCTAGTCCTGGCGGGGGGCTATGAGGATGATGTGGACCATGGGAATTTTTTCACATACACGGGTAGTGGTGGTCGAGATCTTTCCGGCAACAAGAGGACCGCGGAACAGTCTTGTGATCAGAAACTCACCAACACCAACAGGGCGCTGGCTCTCAACTGCTTTGCTCCCATCAATGACCAAGAAGGGGCCGAGGCCAAGGACTGGCGGTCGGGGAAGCCGGTCAGGGTGGTGCGCAATGTCAAGGGTGGCAAGAATAGCAAGTACGCCCCCGCTGAGGGCAACCGCTACGATGGCATCTACAAGGTTGTGAAATACTGGCCCGAGAAGGGGAAGTCCGGGTTTCTCGTGTGGCGCTACCTTCTGCGGAGGGACGATGATGAGCCTGGCCCTTGGACGAAGGAGGGGAAGGACCGGATCAAGAAGCTGGGGCTGACCATGCAGTATCCAGAAGGCTACCTGGAAGCCCTGGCCAACCGAGAGCGAGAGAAGGAGAACAGCAAGAGGGAGGAGGAGGAGCAGCAGGAGGGGGGCTTCGCGTCCCCCAGGACGGGCAAGGGCAAGTGGAAGCGGAAGTCGGCAGGAGGTGGCCCGAGCAGGGCCGGGTCCCCGCGCCGGACATCCAAGAAAACCAAGGTGGAGCCCTACAGTCTCACGGCCCAGCAGAGCAGCCTCATCAGAGAGGACAAGAGCAACGCCAAGCTGTGGAATGAGGTCCTGGCGTCACTCAAGGACCGGCCGGCGAGCGGCAGCCCGTTCCAGTTGTTCCTGAGTAAAGTGGAGGAGACGTTCCAGTGTATCTGCTGTCAGGAGCTGGTGTTCCGGCCCATCACGACCGTGTGCCAGCACAACGTGTGCAAGGACTGCCTGGACAGATCCTTTCGGGCACAGGTGTTCAGCTGCCCTGCCTGCCGCTACGACCTGGGCCGCAGCTATGCCATGCAGGTGAACCAGCCTCTGCAGACCGTCCTCAACCAGCTCTTCCCCGGCTACGGCAATGGCCGGTGATCTCCAAGCACTTCTCGACAGGCGTTTTGCTGAAAACGTGTCGGAGGGCTCGTTCATCGGCACTGATTTTGTTCTTAGTGGGCTTAACTTAAACAGGTAGTGTTTCCTCCGTTCCCTAAAAAGGTTTGTCTTCCTTTTTTTTTTTATTTTTATTTTTCAAATCTATACATTTTCAGGAATTTATGTATTCTGGCTAAAAGTTGGACTTCTCAGTATTGTGTTTAGTTCTTTGAAAACATAAAAGCCTGCAATTTCTCGACAAAACAACACAAGATTTTTTAAAGATGGAATCAGAAACTACGTGGTGTGGAGGCTGTTGATGTTTCTGGTGTCAAGTTCTCAGAAGTTGCTGCCACCAACTCTTTAAGAAGGCGACAGGATCAGTCCTTCTCTCGGGTTCTGGCCCCCAAGGTCAGAGCAAGCATCTTCCTGACAGCATTTTGTCATCTAAAGTCCAGTGACATGGTTCCCCGTGGTGGCCCGTGGCAGCCCGTGGCATGGCGTGGCTCAGCTGTCTGTTGAAGTTGTTGCAAGGAAAAGAGGAAACATCTCGGGCCTAGTTCAAACCTTTGCCTCAAAGCCATCCCCCACCAGACTGCTTAGCGTCTGAGATCCGCGTGAAAAGTCCTCTGCCCACGAGAGCAGGGAGTTGGGGCCACGCAGAAATGGCCTCAAGGGGACTCTGCTCCACGTGGGGCCAGGCGTGTGACTGACGCTGTCCGACGAAGGCGGCCACGGACGGACGCCAGCACACGAAGTCACGTGCAAGTGCCTTTGATTCGTTCCTTCTTTCTAAAGACGACAGTCTTTGTTGTTAGCACTGAATTATTGAAAATGTCAACCAGATTCTAGAAACTGCGGTCATCCAGTTCTTCCTGACACCGGATGGGTGCTTGGGAACCGTTTGAGCCTTATAGATCATTTACATTCAATTTTTTTAACTCAGCAAGTGAGAACTTACAAGAGGGTTTTTTTAAAATTTTTTTTTCTCTTAATGAACACATTTTCTAAATGAATTTTTTTTGTAGTTACTGTATATGTACCAAGAAAGATATAACGTTAGGGTTTGGTTGTTTTTGTTTTTGTATTTTTTTTCTTTTGAAAGGGTTTGTTAATTTTTCTAATTTTACCAAAGTTTGCAGCCTATACCTCAATAAAACAGGGATATTTTAAATCACATACCTGCAGACAAACTGGAGCAATGTTATTTTTAAAGGGTTTTTTTCACCTCCTTATTCTTAGATTATTAATGTATTAGGGAAGAATGAGACAATTTTGTGTAGGCTTTTTCTAAAGTCCAGTACTTTGTCCAGATTTTAGATTCTCAGAATAAATGTTTTTCACAGA
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Sequence Source |
Ensembl |
Keyword |
KW-0002--3D-structure KW-0007--Acetylation KW-0025--Alternative splicing KW-0131--Cell cycle KW-0156--Chromatin regulator KW-0181--Complete proteome KW-0227--DNA damage KW-0234--DNA repair KW-0238--DNA-binding KW-1017--Isopeptide bond KW-0436--Ligase KW-0479--Metal-binding KW-0539--Nucleus KW-0597--Phosphoprotein KW-0621--Polymorphism KW-1185--Reference proteome KW-0677--Repeat KW-0678--Repressor KW-0804--Transcription KW-0805--Transcription regulation KW-0832--Ubl conjugation KW-0833--Ubl conjugation pathway KW-0862--Zinc KW-0863--Zinc-finger --
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Interpro |
IPR015947--PUA-like_domain IPR014722--Rib_L2_dom2 IPR003105--SRA_YDG IPR021991--TTD_dom IPR029071--Ubiquitin-rel_dom IPR000626--Ubiquitin_dom IPR011011--Znf_FYVE_PHD IPR001965--Znf_PHD IPR019787--Znf_PHD-finger IPR001841--Znf_RING IPR013083--Znf_RING/FYVE/PHD IPR017907--Znf_RING_CS
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PROSITE |
PS50053--UBIQUITIN_2 PS51015--YDG PS01359--ZF_PHD_1 PS50016--ZF_PHD_2 PS00518--ZF_RING_1 PS50089--ZF_RING_2
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Pfam |
PF00628--PHD PF02182--SAD_SRA PF12148--TTD PF00240--ubiquitin
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Gene Ontology |
GO:0000791--C:euchromatin GO:0000792--C:heterochromatin GO:0000790--C:nuclear chromatin GO:0005720--C:nuclear heterochromatin GO:0016363--C:nuclear matrix GO:0005634--C:nucleus GO:0005657--C:replication fork GO:0000987--F:core promoter proximal region sequence-specific DNA binding GO:0044729--F:hemi-methylated DNA-binding GO:0042393--F:histone binding GO:0042802--F:identical protein binding GO:0016874--F:ligase activity GO:0008327--F:methyl-CpG binding GO:0035064--F:methylated histone binding GO:0031493--F:nucleosomal histone binding GO:0003700--F:transcription factor activity, sequence-specific DNA binding GO:0061630--F:ubiquitin protein ligase activity GO:0004842--F:ubiquitin-protein transferase activity GO:0008270--F:zinc ion binding GO:0007049--P:cell cycle GO:0008283--P:cell proliferation GO:0006281--P:DNA repair GO:0010390--P:histone monoubiquitination GO:0016574--P:histone ubiquitination GO:0010216--P:maintenance of DNA methylation GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter GO:0032270--P:positive regulation of cellular protein metabolic process GO:2000373--P:positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter GO:0051865--P:protein autoubiquitination GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process GO:0090308--P:regulation of methylation-dependent chromatin silencing GO:0006351--P:transcription, DNA-templated
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Orthology |
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Created Date |
25-Jun-2016 |