Tag |
Content |
WERAM ID |
WERAM-Mum-0006 |
Ensembl Protein ID |
ENSMUSP00000108662.2 |
Uniprot Accession |
Q8VDF2; UHRF1_MOUSE; Q3U9D7; Q3U9P2; Q3UI74; Q3UIE6; Q3ULF2; Q3ULQ0; Q8C6F1; Q8VIA1; Q9Z1H6 |
Genbank Protein ID |
NP_001104548.1; NP_001104549.1; NP_001104550.1; NP_035061.3 |
Protein Name |
E3 ubiquitin-protein ligase UHRF1 |
Genbank Nucleotide ID |
NM_001111078.1; NM_001111079.1; NM_001111080.1; NM_010931.3 |
Gene Name |
Uhrf1;NP95 |
Ensembl Information |
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Details |
Type |
Family |
Domain |
Substrates |
AA |
References (PMIDs) |
Me_Reader |
PHD |
PHD-type |
H3K9me3; H3R2me0 |
R |
20026581 |
Me_Reader |
Tudor |
Tudor |
H3K9me3; H3R2me0 |
R |
20026581 |
|
Status |
Reviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
Me_Reader |
Tudor |
5.80e-29 |
101.6 |
131 |
278 |
Me_Reader |
PHD |
1.20e-10 |
42.9 |
306 |
370 |
|
Organism |
Mus musculus |
NCBI Taxa ID |
10090 |
Functional Description (View)Functional Description
Multidomain protein that acts as a key epigenetic regulator by bridging DNA methylation and chromatin modification. Specifically recognizes and binds hemimethylated DNA at replication forks via its YDG domain and recruits DNMT1 methyltransferase to ensure faithful propagation of the DNA methylation patterns through DNA replication. In addition to its role in maintenance of DNA methylation, also plays a key role in chromatin modification: through its tudor-like regions and PHD-type zinc fingers, specifically recognizes and binds histone H3 trimethylated at 'Lys-9' (H3K9me3) and unmethylated at 'Arg-2' (H3R2me0), respectively, and recruits chromatin proteins. Enriched in pericentric heterochromatin where it recruits different chromatin modifiers required for this chromatin replication. Also localizes to euchromatic regions where it negatively regulates transcription possibly by impacting DNA methylation and histone modifications. Has E3 ubiquitin-protein ligase activity by mediating the ubiquitination of target proteins such as histone H3 and PML. It is still unclear how E3 ubiquitin-protein ligase activity is related to its role in chromatin in vivo. May be involved in DNA repair. |
Multidomain protein that acts as a key epigenetic regulator by bridging DNA methylation and chromatin modification. Specifically recognizes and binds hemimethylated DNA at replication forks via its YDG domain and recruits DNMT1 methyltransferase to ensure faithful propagation of the DNA methylation patterns through DNA replication. In addition to its role in maintenance of DNA methylation, also plays a key role in chromatin modification: through its tudor-like regions and PHD-type zinc fingers, specifically recognizes and binds histone H3 trimethylated at 'Lys-9' (H3K9me3) and unmethylated at 'Arg-2' (H3R2me0), respectively, and recruits chromatin proteins. Enriched in pericentric heterochromatin where it recruits different chromatin modifiers required for this chromatin replication. Also localizes to euchromatic regions where it negatively regulates transcription possibly by impacting DNA methylation and histone modifications. Has E3 ubiquitin-protein ligase activity by mediating the ubiquitination of target proteins such as histone H3 and PML. It is still unclear how E3 ubiquitin-protein ligase activity is related to its role in chromatin in vivo. May be involved in DNA repair.
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Domain Profile |
Me_Reader Tudor
Tudor.txt 2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyy..............sikyedqrkwyilsLekgnrlreqyg 63 +kv+++V+++++++G+++++++V++++r+ s++e++ ++ky+d++++ +++++k++++r++++ ENSMUSP00000108662.2 131 YKVNEYVDVRDNIFGAWFEAQVVQVQKRALSEDEPCsssavktseddimyHVKYDDYPEH-GVDIVKAKNVRARAR 205 9***********************************************************.77*********9875 PP Tudor.txt 1 nskvGlrVvakwssdG....yfYsgkiVvkghrvesgeeyy.sikyedqrkwyilsLekgnrlreqy 62 n++vG+ V+a+++ d+ f+++ +++++++++++e+y +i+ ++++++++++++++++ +++ ENSMUSP00000108662.2 212 NLEVGQVVMANYNVDYprkrGFWYDVEICRKRQTRTARELYgNIRLLNDSQLNNCRIMFVDEVLMIE 278 789**********************************************************998876 PP
Me_Reader PHD
PHD.txt 3 iClvCgkddegeke.....mvq...........CdeCddwfHlkCvklplsslp.egkswyCpsCke 52 +C++C kdde++++ +v+ CdeCd++fHl+C+k+pl+s+p e+ +wyCpsC++ ENSMUSP00000108662.2 306 SCRFC-KDDENKPCrkcacHVCggreapekqllCDECDMAFHLYCLKPPLTSVPpEP-EWYCPSCRT 370 68888.777777777767755566666666666*********************666.*******97 PP
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Protein Sequence (Fasta) | MWIQVRTMDG KETHTVNSLS RLTKVQELRK KIEEVFHVEP QLQRLFYRGK QMEDGHTLFD 60 YDVRLNDTIQ LLVRQSLALP LSTKERDSEL SDSDSGYGVG HSESDKSSTH GEGAAEADDK 120 TVWEDTDLGL YKVNEYVDVR DNIFGAWFEA QVVQVQKRAL SEDEPCSSSA VKTSEDDIMY 180 HVKYDDYPEH GVDIVKAKNV RARARTVIPW ENLEVGQVVM ANYNVDYPRK RGFWYDVEIC 240 RKRQTRTARE LYGNIRLLND SQLNNCRIMF VDEVLMIELP KERRPLIASP SQPPPALRNT 300 GKSGPSCRFC KDDENKPCRK CACHVCGGRE APEKQLLCDE CDMAFHLYCL KPPLTSVPPE 360 PEWYCPSCRT DSSEVVQAGE KLKESKKKAK MASATSSSRR DWGKGMACVG RTTECTIVPA 420 NHFGPIPGVP VGTMWRFRVQ VSESGVHRPH VAGIHGRSND GAYSLVLAGG YEDDVDNGNY 480 FTYTGSGGRD LSGNKRTAGQ SSDQKLTNNN RALALNCHSP INEKGAEAED WRQGKPVRVV 540 RNMKGGKHSK YAPAEGNRYD GIYKVVKYWP ERGKSGFLVW RYLLRRDDTE PEPWTREGKD 600 RTRQLGLTMQ YPEGYLEALA NKEKSRKRPA KALEQGPSSS KTGKSKQKST GPTLSSPRAS 660 KKSKLEPYTL SEQQANLIKE DKGNAKLWDD VLTSLQDGPY QIFLSKVKEA FQCICCQELV 720 FRPVTTVCQH NVCKDCLDRS FRAQVFSCPA CRFELDHSSP TRVNQPLQTI LNQLFPGYGS 780 GR 782Protein Fasta Sequence
>ENSMUSP00000108662.2|Uhrf1;NP95|Mus musculus MWIQVRTMDGKETHTVNSLSRLTKVQELRKKIEEVFHVEPQLQRLFYRGKQMEDGHTLFDYDVRLNDTIQLLVRQSLALPLSTKERDSELSDSDSGYGVGHSESDKSSTHGEGAAEADDKTVWEDTDLGLYKVNEYVDVRDNIFGAWFEAQVVQVQKRALSEDEPCSSSAVKTSEDDIMYHVKYDDYPEHGVDIVKAKNVRARARTVIPWENLEVGQVVMANYNVDYPRKRGFWYDVEICRKRQTRTARELYGNIRLLNDSQLNNCRIMFVDEVLMIELPKERRPLIASPSQPPPALRNTGKSGPSCRFCKDDENKPCRKCACHVCGGREAPEKQLLCDECDMAFHLYCLKPPLTSVPPEPEWYCPSCRTDSSEVVQAGEKLKESKKKAKMASATSSSRRDWGKGMACVGRTTECTIVPANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPERGKSGFLVWRYLLRRDDTEPEPWTREGKDRTRQLGLTMQYPEGYLEALANKEKSRKRPAKALEQGPSSSKTGKSKQKSTGPTLSSPRASKKSKLEPYTLSEQQANLIKEDKGNAKLWDDVLTSLQDGPYQIFLSKVKEAFQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPACRFELDHSSPTRVNQPLQTILNQLFPGYGSGR
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Nucleotide Sequence (Fasta) | GTGTCCCGAG GGGAAGTTAG GGCAGCCAGC TGTGGGTGGG GTTCAGTACA TCGGCATCAT 60 GTGGATCCAG GTTCGAACTA TGGATGGGAA GGAGACCCAC ACCGTGAACT CTCTGTCCAG 120 GTTGACCAAG GTGCAGGAGC TGAGGAAAAA GATTGAGGAA GTGTTTCACG TGGAACCCCA 180 ACTACAGAGA CTCTTTTATA GGGGCAAACA GATGGAGGAT GGCCACACAC TCTTCGATTA 240 TGATGTGCGC CTCAATGACA CAATCCAGCT GCTCGTGCGC CAGAGTCTGG CACTGCCTCT 300 CAGTACAAAA GAACGGGACT CGGAGCTCTC AGACTCTGAC TCTGGCTATG GTGTGGGTCA 360 CAGTGAATCA GACAAGTCGT CCACGCATGG TGAAGGGGCA GCTGAAGCGG ATGACAAGAC 420 TGTGTGGGAG GACACGGACC TGGGGCTGTA CAAGGTCAAT GAGTATGTGG ACGTGCGTGA 480 CAATATCTTC GGTGCATGGT TTGAGGCCCA GGTGGTCCAG GTACAGAAGA GAGCCCTATC 540 TGAGGACGAG CCCTGTAGCT CCAGTGCCGT TAAGACCTCG GAGGATGACA TCATGTACCA 600 TGTCAAGTAT GATGACTATC CAGAGCATGG AGTGGACATT GTCAAAGCCA AGAATGTCCG 660 TGCTCGTGCT CGCACTGTGA TACCATGGGA GAACCTGGAG GTGGGTCAGG TGGTCATGGC 720 CAACTATAAC GTGGACTACC CCAGGAAACG CGGCTTCTGG TATGATGTTG AGATCTGTAG 780 GAAGCGCCAA ACCAGGACGG CACGTGAGCT ATACGGCAAC ATCAGGCTCT TGAATGACTC 840 TCAGCTCAAC AACTGTCGGA TCATGTTTGT GGATGAAGTC TTGATGATTG AGCTCCCTAA 900 AGAGAGGAGG CCTTTGATCG CTAGCCCCTC GCAACCCCCT CCTGCCCTCC GGAACACAGG 960 GAAGAGCGGC CCATCCTGCC GGTTCTGCAA GGATGATGAA AACAAACCAT GTCGAAAGTG 1020 TGCCTGCCAT GTGTGTGGTG GGCGCGAGGC TCCTGAGAAA CAGCTGTTGT GTGATGAGTG 1080 TGACATGGCC TTCCACCTGT ACTGCCTGAA GCCACCGCTC ACCTCTGTCC CCCCTGAGCC 1140 GGAGTGGTAC TGCCCCAGCT GCCGCACTGA CTCAAGTGAG GTGGTACAAG CAGGGGAGAA 1200 GCTGAAGGAG AGCAAGAAGA AGGCAAAGAT GGCATCAGCC ACTTCCTCCT CCCGGCGGGA 1260 CTGGGGCAAG GGCATGGCAT GTGTGGGCCG CACCACAGAG TGTACCATTG TGCCCGCCAA 1320 CCACTTCGGG CCCATCCCTG GTGTCCCTGT GGGCACCATG TGGCGCTTCA GAGTCCAGGT 1380 CAGTGAGTCC GGTGTGCATC GGCCTCATGT GGCAGGCATC CATGGCCGGA GCAACGACGG 1440 TGCCTACTCA TTGGTCCTGG CTGGTGGCTA TGAGGATGAT GTGGACAATG GCAATTACTT 1500 CACATACACA GGGAGTGGTG GCCGAGACCT CTCTGGCAAC AAGCGTACAG CAGGCCAGTC 1560 CTCTGACCAG AAGCTCACTA ATAACAATAG GGCTCTGGCA CTCAATTGCC ACTCCCCAAT 1620 CAATGAGAAA GGTGCGGAGG CTGAAGACTG GCGCCAAGGG AAGCCAGTGC GTGTGGTCCG 1680 GAACATGAAG GGCGGGAAAC ACAGCAAGTA CGCTCCTGCA GAGGGCAACC GCTATGATGG 1740 CATCTACAAG GTGGTGAAGT ACTGGCCAGA GAGAGGGAAA TCTGGCTTCC TCGTGTGGCG 1800 TTATCTCCTT CGACGAGATG ACACAGAGCC TGAGCCCTGG ACCCGGGAGG GCAAGGACCG 1860 CACTCGACAG CTGGGGCTCA CTATGCAGTA CCCTGAAGGC TACTTGGAGG CCTTGGCTAA 1920 CAAGGAGAAG AGCAGGAAGC GCCCGGCCAA GGCCTTGGAG CAGGGACCCT CATCTTCCAA 1980 GACAGGCAAA AGCAAGCAGA AGTCCACAGG GCCAACCCTC TCCAGCCCCC GTGCCTCTAA 2040 GAAGAGCAAG CTGGAGCCGT ACACACTCTC AGAGCAGCAG GCTAACCTCA TCAAAGAGGA 2100 CAAGGGCAAC GCCAAGCTGT GGGATGATGT GCTAACTTCA CTTCAGGATG GGCCGTACCA 2160 GATCTTCCTG AGCAAGGTGA AAGAGGCTTT CCAGTGCATC TGCTGCCAGG AGCTGGTGTT 2220 CCGGCCAGTC ACCACCGTGT GTCAGCACAA CGTCTGTAAG GACTGTCTGG ACAGGTCCTT 2280 CCGGGCCCAG GTGTTCAGCT GCCCAGCCTG TCGCTTTGAG CTGGACCACA GCTCCCCAAC 2340 CCGGGTGAAC CAGCCCTTGC AGACCATTCT CAACCAGCTC TTCCCTGGCT ATGGCAGCGG 2400 CCGGTGATGC TGAGACCCAG GCAGAGGGCT CATGGTTCCA ACTTCATAGT GTGTTTAGCT 2460 TGAAGGTGTT GTCCTTCACG TCTGCCTGTG GCAACTCTTC TGATCTGGTC ACCAGTTAAC 2520 CAGGCATCTA TAGGAATCCC ATGTTCTGGC TACCAGTTGG ACTTCTGTTT TTCATCCCTC 2580 CACCCCCTTT CTATAACAAA GCCTGCGATT TATTGTCCAA GAGAAGGAAA AAAATGTTTT 2640 TGTTTTTGTT TTTTTTTTTT TGAGATGGGT TTAGAAACCG TTGAGTTTCA TACCAGGCCT 2700 CATGTCATGC TGGTAGGAGT TCTCCCCACA CCAGCTGCCT AGAAACCATC TGCACCCATC 2760 TTTGAAAAGC CCAGACATGT CTTCCTGGCA GCTATCTGTG TGCTTCATTC CAGGGGTGGC 2820 CCCTGCAGCT GCCCCTCAGA CCTTCATAGA TGCCCTGGCC CGCGCCATTC ACTGACATGA 2880 TTGCAGAGGG GAGTTGGCTG TGGCCTCAGG CCAGGGGACC AGCTGGGCTG AAGCTGCATG 2940 TGCCTTGGGC TGGCCACTTC TTCACTCCCC TCACCACTGA GCATTGGATG TCTACCTTGA 3000 AAGCCTGGTT TTCAGAGAGT GCACTGACTG GGTGTCATGG AAGGCAGAGA TGTGTTATCA 3060 GTTCCATCTC ATTTTTAACT CAGCAACAGA ATTCTGAGGG TTTCTGTATT ATGGGTTTTT 3120 TTATTTTTAT TTTTTAAAGC GAGATAAATG GGTTTCCTCG ATGAATTTCT TTTGTAGTTA 3180 CAGCCTGTAC TGAGGAAGAT GTTTTCCTTG GTAGGTTTTG TTTCTTTTGT AACTTTACCA 3240 AAGTGTGCAG GTGTGTCTCA TGGAAACTAA ACCATTTACT ACAGGCAGAC TGGACAGCAC 3300 AGTTCTAAGG GTTGTGTTTT GTTTTGTGTG GGGTATTTTT TCCTTGTTAG ATTGTTAACA 3360 TATTGCAATA AAATAAAATT CTGGCCGGGC A
3392Nucleotide Fasta Sequence
>ENSMUSP00000108662.2|PHD|Mus musculus GTGTCCCGAGGGGAAGTTAGGGCAGCCAGCTGTGGGTGGGGTTCAGTACATCGGCATCATGTGGATCCAGGTTCGAACTATGGATGGGAAGGAGACCCACACCGTGAACTCTCTGTCCAGGTTGACCAAGGTGCAGGAGCTGAGGAAAAAGATTGAGGAAGTGTTTCACGTGGAACCCCAACTACAGAGACTCTTTTATAGGGGCAAACAGATGGAGGATGGCCACACACTCTTCGATTATGATGTGCGCCTCAATGACACAATCCAGCTGCTCGTGCGCCAGAGTCTGGCACTGCCTCTCAGTACAAAAGAACGGGACTCGGAGCTCTCAGACTCTGACTCTGGCTATGGTGTGGGTCACAGTGAATCAGACAAGTCGTCCACGCATGGTGAAGGGGCAGCTGAAGCGGATGACAAGACTGTGTGGGAGGACACGGACCTGGGGCTGTACAAGGTCAATGAGTATGTGGACGTGCGTGACAATATCTTCGGTGCATGGTTTGAGGCCCAGGTGGTCCAGGTACAGAAGAGAGCCCTATCTGAGGACGAGCCCTGTAGCTCCAGTGCCGTTAAGACCTCGGAGGATGACATCATGTACCATGTCAAGTATGATGACTATCCAGAGCATGGAGTGGACATTGTCAAAGCCAAGAATGTCCGTGCTCGTGCTCGCACTGTGATACCATGGGAGAACCTGGAGGTGGGTCAGGTGGTCATGGCCAACTATAACGTGGACTACCCCAGGAAACGCGGCTTCTGGTATGATGTTGAGATCTGTAGGAAGCGCCAAACCAGGACGGCACGTGAGCTATACGGCAACATCAGGCTCTTGAATGACTCTCAGCTCAACAACTGTCGGATCATGTTTGTGGATGAAGTCTTGATGATTGAGCTCCCTAAAGAGAGGAGGCCTTTGATCGCTAGCCCCTCGCAACCCCCTCCTGCCCTCCGGAACACAGGGAAGAGCGGCCCATCCTGCCGGTTCTGCAAGGATGATGAAAACAAACCATGTCGAAAGTGTGCCTGCCATGTGTGTGGTGGGCGCGAGGCTCCTGAGAAACAGCTGTTGTGTGATGAGTGTGACATGGCCTTCCACCTGTACTGCCTGAAGCCACCGCTCACCTCTGTCCCCCCTGAGCCGGAGTGGTACTGCCCCAGCTGCCGCACTGACTCAAGTGAGGTGGTACAAGCAGGGGAGAAGCTGAAGGAGAGCAAGAAGAAGGCAAAGATGGCATCAGCCACTTCCTCCTCCCGGCGGGACTGGGGCAAGGGCATGGCATGTGTGGGCCGCACCACAGAGTGTACCATTGTGCCCGCCAACCACTTCGGGCCCATCCCTGGTGTCCCTGTGGGCACCATGTGGCGCTTCAGAGTCCAGGTCAGTGAGTCCGGTGTGCATCGGCCTCATGTGGCAGGCATCCATGGCCGGAGCAACGACGGTGCCTACTCATTGGTCCTGGCTGGTGGCTATGAGGATGATGTGGACAATGGCAATTACTTCACATACACAGGGAGTGGTGGCCGAGACCTCTCTGGCAACAAGCGTACAGCAGGCCAGTCCTCTGACCAGAAGCTCACTAATAACAATAGGGCTCTGGCACTCAATTGCCACTCCCCAATCAATGAGAAAGGTGCGGAGGCTGAAGACTGGCGCCAAGGGAAGCCAGTGCGTGTGGTCCGGAACATGAAGGGCGGGAAACACAGCAAGTACGCTCCTGCAGAGGGCAACCGCTATGATGGCATCTACAAGGTGGTGAAGTACTGGCCAGAGAGAGGGAAATCTGGCTTCCTCGTGTGGCGTTATCTCCTTCGACGAGATGACACAGAGCCTGAGCCCTGGACCCGGGAGGGCAAGGACCGCACTCGACAGCTGGGGCTCACTATGCAGTACCCTGAAGGCTACTTGGAGGCCTTGGCTAACAAGGAGAAGAGCAGGAAGCGCCCGGCCAAGGCCTTGGAGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCCAACCCTCTCCAGCCCCCGTGCCTCTAAGAAGAGCAAGCTGGAGCCGTACACACTCTCAGAGCAGCAGGCTAACCTCATCAAAGAGGACAAGGGCAACGCCAAGCTGTGGGATGATGTGCTAACTTCACTTCAGGATGGGCCGTACCAGATCTTCCTGAGCAAGGTGAAAGAGGCTTTCCAGTGCATCTGCTGCCAGGAGCTGGTGTTCCGGCCAGTCACCACCGTGTGTCAGCACAACGTCTGTAAGGACTGTCTGGACAGGTCCTTCCGGGCCCAGGTGTTCAGCTGCCCAGCCTGTCGCTTTGAGCTGGACCACAGCTCCCCAACCCGGGTGAACCAGCCCTTGCAGACCATTCTCAACCAGCTCTTCCCTGGCTATGGCAGCGGCCGGTGATGCTGAGACCCAGGCAGAGGGCTCATGGTTCCAACTTCATAGTGTGTTTAGCTTGAAGGTGTTGTCCTTCACGTCTGCCTGTGGCAACTCTTCTGATCTGGTCACCAGTTAACCAGGCATCTATAGGAATCCCATGTTCTGGCTACCAGTTGGACTTCTGTTTTTCATCCCTCCACCCCCTTTCTATAACAAAGCCTGCGATTTATTGTCCAAGAGAAGGAAAAAAATGTTTTTGTTTTTGTTTTTTTTTTTTTGAGATGGGTTTAGAAACCGTTGAGTTTCATACCAGGCCTCATGTCATGCTGGTAGGAGTTCTCCCCACACCAGCTGCCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCTTCATTCCAGGGGTGGCCCCTGCAGCTGCCCCTCAGACCTTCATAGATGCCCTGGCCCGCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACTGACTGGGTGTCATGGAAGGCAGAGATGTGTTATCAGTTCCATCTCATTTTTAACTCAGCAACAGAATTCTGAGGGTTTCTGTATTATGGGTTTTTTTATTTTTATTTTTTAAAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTACTGAGGAAGATGTTTTCCTTGGTAGGTTTTGTTTCTTTTGTAACTTTACCAAAGTGTGCAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTGTTTTGTGTGGGGTATTTTTTCCTTGTTAGATTGTTAACATATTGCAATAAAATAAAATTCTGGCCGGGCA
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Sequence Source |
Ensembl |
Keyword |
KW-0002--3D-structure KW-0007--Acetylation KW-0025--Alternative splicing KW-0131--Cell cycle KW-0156--Chromatin regulator KW-0181--Complete proteome KW-0227--DNA damage KW-0234--DNA repair KW-0238--DNA-binding KW-1017--Isopeptide bond KW-0436--Ligase KW-0479--Metal-binding KW-0539--Nucleus KW-0597--Phosphoprotein KW-1185--Reference proteome KW-0677--Repeat KW-0678--Repressor KW-0804--Transcription KW-0805--Transcription regulation KW-0832--Ubl conjugation KW-0833--Ubl conjugation pathway KW-0862--Zinc KW-0863--Zinc-finger --
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Interpro |
IPR015947--PUA-like_domain IPR014722--Rib_L2_dom2 IPR003105--SRA_YDG IPR021991--TTD_dom IPR029071--Ubiquitin-rel_dom IPR000626--Ubiquitin_dom IPR011011--Znf_FYVE_PHD IPR001965--Znf_PHD IPR019787--Znf_PHD-finger IPR001841--Znf_RING IPR013083--Znf_RING/FYVE/PHD IPR017907--Znf_RING_CS
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PROSITE |
PS50053--UBIQUITIN_2 PS51015--YDG PS01359--ZF_PHD_1 PS50016--ZF_PHD_2 PS00518--ZF_RING_1 PS50089--ZF_RING_2
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Pfam |
PF00628--PHD PF02182--SAD_SRA PF12148--TTD PF00240--ubiquitin
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Gene Ontology |
GO:0031410--C:cytoplasmic vesicle GO:0000791--C:euchromatin GO:0000792--C:heterochromatin GO:0000790--C:nuclear chromatin GO:0005720--C:nuclear heterochromatin GO:0016363--C:nuclear matrix GO:0005654--C:nucleoplasm GO:0005634--C:nucleus GO:0005886--C:plasma membrane GO:0005657--C:replication fork GO:0000987--F:core promoter proximal region sequence-specific DNA binding GO:0044729--F:hemi-methylated DNA-binding GO:0042393--F:histone binding GO:0042802--F:identical protein binding GO:0016874--F:ligase activity GO:0008327--F:methyl-CpG binding GO:0035064--F:methylated histone binding GO:0031493--F:nucleosomal histone binding GO:0061630--F:ubiquitin protein ligase activity GO:0004842--F:ubiquitin-protein transferase activity GO:0008270--F:zinc ion binding GO:0007049--P:cell cycle GO:0008283--P:cell proliferation GO:0032776--P:DNA methylation on cytosine GO:0006281--P:DNA repair GO:0010390--P:histone monoubiquitination GO:0016574--P:histone ubiquitination GO:0010216--P:maintenance of DNA methylation GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter GO:0032270--P:positive regulation of cellular protein metabolic process GO:0051865--P:protein autoubiquitination GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process GO:0043434--P:response to peptide hormone GO:0006351--P:transcription, DNA-templated
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Orthology |
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Created Date |
25-Jun-2016 |