| Tag |
Content |
| WERAM ID |
WERAM-Orc-0075 |
| Ensembl Protein ID |
ENSOCUP00000006927.2 |
| Gene Name |
CBX1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| Me_Reader |
Chromodomain |
4.30e-18 |
65.2 |
22 |
182 |
| Me_Reader |
DCD |
1.90e-36 |
111 |
23 |
78 |
|
| Organism |
Oryctolagus cuniculus |
| Domain Profile |
Me_Reader Chromodomain
Chromodomain.txt 2 everivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefekkke 53
ve+++ ++++ kg+veYl +WkG++++d+tWepeenL c+ l++ef + ++
ENSOCUP00000006927.2 22 VVEKVL-DRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQK 72
599999.99999***********************************76654 PP
Chromodomain.txt 4 erivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefek 50
eri+ + ge +l +Wk+ ++ d e n +c++++ f +
ENSOCUP00000006927.2 124 ERII-GATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYE 169
5566.4555678999******98888777777778888888777755 PP
Chromodomain.txt 23 WkGynksdd 31
W y+++dd
ENSOCUP00000006927.2 174 WHSYPSEDD 182
999999998 PP
Me_Reader DCD
Chromo-2.txt 3 verIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeeresmrgee 61
ve++++ kG+++yL+kWk+ +we++ en ++p l+ +f ++++ ++ +
ENSOCUP00000006927.2 23 VEKVLDRR-VVKGKVEYLLKWKGFSDEDNTWEPE--ENLDCPDLIAEFLQSQKTAHETD 78
77888877.689***********98888899986..79*************99999865 PP
Chromo-2.txt 2 mverIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeeresmrgee 61
++erIi+++ d++Gel++L+kWk++ dea++++a+++n k+pq+v+sfyeer+++++++
ENSOCUP00000006927.2 122 EPERIIGAT-DSSGELMFLMKWKNS--DEADLVPAKEANVKCPQVVISFYEERLTWHSYP 178
79*******.***************..******************************986 PP
|
Protein Sequence
(Fasta) | MGKKQNKKKV EEVLEEEEEE YVVEKVLDRR VVKGKVEYLL KWKGFSDEDN TWEPEENLDC 60
PDLIAEFLQS QKTAHETDKS EGGKRKADSD SEDKGEESKP KKKKEEVRLE SEKPRGFARG 120
LEPERIIGAT DSSGELMFLM KWKNSDEADL VPAKEANVKC PQVVISFYEE RLTWHSYPSE 180
DDDKKDDKN 189Protein Fasta Sequence
>ENSOCUP00000006927.2|DCD|Oryctolagus cuniculus
MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKKKKEEVRLESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHSYPSEDDDKKDDKN |
Nucleotide Sequence
(Fasta) | ATGGGGAAAA AACAAAACAA GAAGAAAGTG GAGGAGGTGC TAGAAGAGGA GGAAGAGGAA 60
TATGTGGTGG AAAAAGTTCT TGACCGTCGA GTTGTAAAGG GCAAAGTGGA GTACCTCCTA 120
AAGTGGAAAG GTTTCTCAGA TGAAGACAAT ACGTGGGAAC CAGAAGAGAA TCTGGATTGC 180
CCTGACCTCA TTGCTGAGTT TCTGCAGTCA CAGAAAACAG CACATGAGAC AGATAAGTCA 240
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AGGGAGAAGA GAGCAAACCA 300
AAGAAGAAGA AAGAAGAGGT AAGGCTAGAA TCAGAAAAGC CACGAGGCTT TGCCCGGGGT 360
TTGGAGCCGG AACGGATCAT TGGAGCTACA GACTCAAGTG GAGAACTCAT GTTCCTGATG 420
AAATGGAAAA ACTCTGATGA GGCCGACCTG GTCCCTGCCA AGGAAGCCAA TGTCAAGTGC 480
CCACAGGTTG TCATTTCCTT CTATGAGGAA AGGCTGACGT GGCACTCCTA TCCCTCGGAG 540
GATGACGACA AAAAAGATGA CAAGAAT
568Nucleotide Fasta Sequence
>ENSOCUP00000006927.2|DCD|Oryctolagus cuniculus
ATGGGGAAAAAACAAAACAAGAAGAAAGTGGAGGAGGTGCTAGAAGAGGAGGAAGAGGAATATGTGGTGGAAAAAGTTCTTGACCGTCGAGTTGTAAAGGGCAAAGTGGAGTACCTCCTAAAGTGGAAAGGTTTCTCAGATGAAGACAATACGTGGGAACCAGAAGAGAATCTGGATTGCCCTGACCTCATTGCTGAGTTTCTGCAGTCACAGAAAACAGCACATGAGACAGATAAGTCAGAGGGAGGCAAGCGCAAAGCTGATTCTGATTCTGAAGATAAGGGAGAAGAGAGCAAACCAAAGAAGAAGAAAGAAGAGGTAAGGCTAGAATCAGAAAAGCCACGAGGCTTTGCCCGGGGTTTGGAGCCGGAACGGATCATTGGAGCTACAGACTCAAGTGGAGAACTCATGTTCCTGATGAAATGGAAAAACTCTGATGAGGCCGACCTGGTCCCTGCCAAGGAAGCCAATGTCAAGTGCCCACAGGTTGTCATTTCCTTCTATGAGGAAAGGCTGACGTGGCACTCCTATCCCTCGGAGGATGACGACAAAAAAGATGACAAGAAT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
