WERAM Information

Tag Content
WERAM ID WERAM-Loa-0144
Ensembl Protein ID ENSLAFP00000012898.2
Gene Name GTF3C4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLAFG00000015395.2 ENSLAFT00000015393.2 ENSLAFP00000012898.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HAT HAT_other 0 1565
Organism Loxodonta africana
Domain Profile
  HAT HAT_other
Query: 47  FRLMVTRREPAVKLQYAVSGLEPLSWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHR 106
           FRLMVTRREPAVKLQYAVSGLEPL+WSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHR
Sbjct: 47  FRLMVTRREPAVKLQYAVSGLEPLAWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHR 106
Query: 107 TSVPAPLNSCFLKVGSKKEVAECKEKFATSKDPTVSQTFMLDRVFNPEGKALPPLRGFKY 166
           TSVPAPLNSC LKVGSK EVAECKEKFA SKDPTVSQTFMLDRVFNPEGKALPP+RGFKY
Sbjct: 107 TSVPAPLNSCLLKVGSKTEVAECKEKFAASKDPTVSQTFMLDRVFNPEGKALPPMRGFKY 166
Query: 167 TSWSPMGCDANGRCLLAALTMDNRLTVQANLSRLQWVQLVDLTEIYGERLYETSYRRSKN 226
           TSWSPMGCDANGRCLLAALTMDNRLT+QANL+RLQWVQLVDLTEIYGERLYETSYR SKN
Sbjct: 167 TSWSPMGCDANGRCLLAALTMDNRLTIQANLNRLQWVQLVDLTEIYGERLYETSYRLSKN 226
Query: 227 EAPEGSLGDFAEFQRRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIA 286
           EAPEG+LGDFAEFQRRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIA
Sbjct: 227 EAPEGNLGDFAEFQRRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIA 286
Query: 287 VWQFQLPFVGKESISSCNTIESGINSPSVLFWWEYEHNNRKMNGLIVGSAFGPVKILPVN 346
           VWQFQLPFVGKESISSCNTIESGI SPSVLFWWEYEHNNRKM+GLIVGSAFGP+KILPVN
Sbjct: 287 VWQFQLPFVGKESISSCNTIESGITSPSVLFWWEYEHNNRKMSGLIVGSAFGPIKILPVN 346
Query: 347 LKAVKGYFTLRQPVVLWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLI 406
           LKAVKGYFTLRQPV+LWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLI
Sbjct: 347 LKAVKGYFTLRQPVILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLI 406
Query: 407 SKAGLNVHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLI 466
           SKAGLNVHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLI
Sbjct: 407 SKAGLNVHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLI 466
Query: 467 KLSDVFGSVRTHGIAVSPCGAYLAVITTEGMVNGLHPVNKNYQVQFVTLKTFEEAAAQLL 526
           KLSDVFGSVRTHGIAVSPCGAYLA+ITTEGM+NGLHPVNKNYQVQFVTLKTFEEAAAQLL
Sbjct: 467 KLSDVFGSVRTHGIAVSPCGAYLAIITTEGMINGLHPVNKNYQVQFVTLKTFEEAAAQLL 526
Query: 527 ESSVQNLFKQVDLIDLVRWKILKDKHIPQFLHEALEKKIESSGATYFWRFKLFLLRILYQ 586
           ESSVQNLFKQVDLIDLVRWKILKDKHIPQFL EALEKKIESSG TYFWRFKLFLLRILYQ
Sbjct: 527 ESSVQNLFKQVDLIDLVRWKILKDKHIPQFLQEALEKKIESSGVTYFWRFKLFLLRILYQ 586
Query: 587 SMQKIPSEALWKPSNEDSKILLLDSPRMGNAEDEQQEEGT-SKQVNKQSFQERSKEGDTE 645
           SMQK PSEALWKP++EDSKILL+DSP MGNA+DEQQEEGT SKQV KQ  QERSKEGD E
Sbjct: 587 SMQKTPSEALWKPTHEDSKILLVDSPGMGNADDEQQEEGTSSKQVVKQGLQERSKEGDVE 646
Query: 646 EPTDDSLTQSGDVGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTS 705
           EPTDDSL  +GD GGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTS
Sbjct: 647 EPTDDSLPTTGDAGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTS 706
Query: 706 IPTRGLCNFLMSDEEYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSN 765
           IPTRGLCNFLMSDEEYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSN
Sbjct: 707 IPTRGLCNFLMSDEEYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSN 766
Query: 766 GHIWLRCFLTYQSCQSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF 821
           GHIWLRCFLTYQSCQSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF
Sbjct: 767 GHIWLRCFLTYQSCQSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF 822
Protein Sequence
(Fasta)		MSTANKARVG PETDGPAPPG EEEGEGGGEA GAKEAAADAA PGPSAAFRLM VTRREPAVKL 60
QYAVSGLEPL SWSEDHRVSV STARSIAVLE LICDVHNPGQ DLVIHRTSVP APLNSCFLKV 120
GSKKEVAECK EKFATSKDPT VSQTFMLDRV FNPEGKALPP LRGFKYTSWS PMGCDANGRC 180
LLAALTMDNR LTVQANLSRL QWVQLVDLTE IYGERLYETS YRRSKNEAPE GSLGDFAEFQ 240
RRHSMQTPVR MEWSGICTTQ QVKHNNECRD VGSVLLAVLF ENGNIAVWQF QLPFVGKESI 300
SSCNTIESGI NSPSVLFWWE YEHNNRKMNG LIVGSAFGPV KILPVNLKAV KGYFTLRQPV 360
VLWKEMDQLP VHSIKCVPLY HPYQKCSCSL VVAARGSYVF WCLLLISKAG LNVHNSHVTG 420
LHSLPIVSMT ADKQNGTVYT CSSDGKVRQL IPIFTDVALK FEHQLIKLSD VFGSVRTHGI 480
AVSPCGAYLA VITTEGMVNG LHPVNKNYQV QFVTLKTFEE AAAQLLESSV QNLFKQVDLI 540
DLVRWKILKD KHIPQFLHEA LEKKIESSGA TYFWRFKLFL LRILYQSMQK IPSEALWKPS 600
NEDSKILLLD SPRMGNAEDE QQEEGTSKQV NKQSFQERSK EGDTEEPTDD SLTQSGDVGG 660
REPMEEKLLE IQGKIEAVEM HLTREHMKRV LGEVYLHTWI TENTSIPTRG LCNFLMSDEE 720
YDDRTARVLI GHISKKMNKQ TFPEHCSLCK EILPFTDRKQ AVCSNGHIWL RCFLTYQSCQ 780
SLIYRRCLLH DSIARHPAPE DPDWIKRLLQ SPCPFCDSPV F 821
Nucleotide Sequence
(Fasta)		ATGTCCACCG CCAACAAGGC CCGAGTGGGG CCCGAGACCG ACGGGCCTGC GCCACCCGGG 60
GAGGAGGAGG GCGAGGGGGG CGGCGAGGCG GGCGCGAAGG AGGCAGCGGC GGACGCGGCT 120
CCCGGGCCCA GTGCCGCGTT CCGCCTCATG GTGACCCGGC GGGAGCCGGC CGTGAAGCTG 180
CAGTACGCAG TGAGCGGCCT GGAGCCGCTC TCCTGGTCCG AGGACCACCG CGTGTCGGTG 240
TCCACGGCCC GCAGCATCGC TGTTCTGGAG CTCATCTGCG ACGTGCACAA CCCGGGCCAG 300
GACCTGGTCA TCCACCGCAC CTCGGTGCCC GCCCCTCTCA ACAGCTGCTT CCTTAAAGTT 360
GGCTCAAAAA AAGAAGTTGC TGAGTGTAAG GAAAAATTTG CCACTTCTAA AGACCCCACA 420
GTCAGTCAGA CTTTCATGTT GGATAGGGTG TTCAATCCTG AAGGCAAGGC TTTGCCACCA 480
CTGAGAGGAT TCAAATACAC TAGCTGGTCC CCGATGGGTT GTGATGCTAA TGGCAGGTGC 540
CTGTTGGCAG CACTGACTAT GGACAACCGC CTTACTGTCC AGGCCAACCT CAGCAGACTA 600
CAGTGGGTAC AGCTGGTTGA TCTGACTGAG ATTTACGGAG AACGACTTTA TGAAACAAGT 660
TACAGGCGCT CTAAAAATGA AGCCCCAGAA GGAAGTCTTG GGGACTTTGC TGAGTTTCAG 720
AGGAGACATA GCATGCAGAC ACCAGTCAGA ATGGAGTGGT CAGGCATCTG TACCACACAG 780
CAGGTCAAGC ATAACAATGA ATGCCGTGAT GTTGGTAGCG TGCTCCTGGC AGTTCTCTTT 840
GAAAATGGTA ACATTGCCGT ATGGCAATTC CAGCTACCAT TTGTAGGAAA AGAATCCATC 900
TCTTCATGCA ATACAATTGA GTCAGGAATC AACTCTCCTA GTGTTTTGTT TTGGTGGGAA 960
TATGAGCACA ATAATCGGAA AATGAATGGC CTTATTGTAG GGAGTGCTTT TGGACCTGTA 1020
AAAATCCTTC CTGTCAATCT CAAAGCAGTT AAAGGTTACT TCACTTTAAG GCAGCCTGTT 1080
GTCTTGTGGA AAGAAATGGA CCAGTTGCCT GTGCACAGCA TTAAGTGTGT ACCACTTTAC 1140
CATCCGTACC AGAAGTGTAG TTGTAGCTTA GTGGTGGCTG CAAGAGGATC CTATGTGTTT 1200
TGGTGTCTTC TTCTGATCTC CAAAGCAGGT CTGAACGTTC ACAATTCCCA TGTCACAGGG 1260
CTTCACTCAC TGCCAATTGT CTCCATGACT GCAGACAAAC AGAATGGAAC AGTATATACT 1320
TGTTCCAGTG ATGGGAAGGT GAGGCAGTTG ATTCCCATTT TCACAGATGT TGCATTAAAG 1380
TTTGAACACC AGTTGATTAA GCTCTCAGAT GTGTTTGGCT CAGTGAGGAC TCATGGGATA 1440
GCAGTGAGCC CCTGTGGTGC ATATCTGGCC GTCATTACAA CCGAGGGCAT GGTCAATGGC 1500
CTCCATCCTG TTAACAAAAA TTACCAGGTC CAGTTTGTTA CTCTCAAAAC CTTTGAAGAG 1560
GCAGCTGCTC AGCTCCTGGA ATCTTCAGTT CAAAATCTCT TTAAGCAGGT AGATTTAATA 1620
GACCTAGTAC GCTGGAAGAT TTTAAAAGAT AAACATATCC CTCAATTTTT ACATGAAGCT 1680
TTGGAAAAAA AGATTGAAAG CAGTGGGGCC ACCTATTTTT GGCGTTTTAA ACTTTTCCTT 1740
CTGAGGATCT TATATCAGTC AATGCAGAAA ATTCCTTCGG AAGCCTTATG GAAACCCTCC 1800
AATGAAGACT CAAAAATCTT ACTACTTGAC TCACCTAGGA TGGGCAATGC TGAGGATGAA 1860
CAGCAAGAAG AAGGCACTTC TAAACAGGTG AATAAACAAA GCTTTCAGGA GAGGAGCAAA 1920
GAAGGTGATA CAGAGGAGCC TACTGATGAC TCACTCACCC AGTCTGGCGA TGTTGGAGGC 1980
CGTGAGCCAA TGGAAGAGAA ACTCCTTGAA ATCCAAGGGA AGATTGAAGC TGTGGAAATG 2040
CACTTGACTA GGGAGCACAT GAAGCGAGTC TTAGGAGAAG TTTACCTGCA CACTTGGATC 2100
ACAGAGAACA CGAGCATCCC TACCAGAGGA CTCTGTAACT TCTTAATGTC CGATGAAGAA 2160
TACGATGACA GAACAGCACG GGTGCTGATT GGACATATCT CAAAGAAGAT GAACAAGCAG 2220
ACTTTCCCCG AGCATTGTAG TTTGTGTAAA GAGATCTTGC CTTTCACAGA TCGAAAACAG 2280
GCAGTCTGTT CAAATGGCCA CATTTGGCTC CGGTGCTTTT TAACCTACCA GTCCTGCCAG 2340
AGTTTGATAT ACAGAAGGTG TTTGCTCCAT GACAGCATTG CCCGACATCC AGCTCCAGAA 2400
GATCCTGACT GGATTAAGAG GTTACTGCAA AGCCCCTGTC CTTTCTGTGA CTCTCCTGTC 2460
TTCTAA 2467
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Prc-0045 ENSPCAP00000004132.1 Procavia capensis 98 0.0 1592
WERAM-Nol-0144 ENSNLEP00000015670.1 Nomascus leucogenys 96 0.0 1566
WERAM-Hos-0109 ENSP00000361219.4 Homo sapiens 96 0.0 1565
WERAM-Mam-0081 ENSMMUP00000012973.2 Macaca mulatta 96 0.0 1563
WERAM-Caf-0206 ENSCAFP00000029457.3 Canis familiaris 96 0.0 1563
WERAM-Paa-0214 ENSPANP00000018814.1 Papio anubis 96 0.0 1561
WERAM-Chs-0181 ENSCSAP00000011065.1 Chlorocebus sabaeus 96 0.0 1561
WERAM-Caj-0193 ENSCJAP00000033601.2 Callithrix jacchus 96 0.0 1558
WERAM-Otg-0086 ENSOGAP00000006821.2 Otolemur garnettii 95 0.0 1553
WERAM-Poa-0187 ENSPPYP00000022107.2 Pongo abelii 95 0.0 1549
WERAM-Cap-0154 ENSCPOP00000012836.2 Cavia porcellus 95 0.0 1546
WERAM-Mup-0142 ENSMPUP00000012425.1 Mustela putorius furo 95 0.0 1543
WERAM-Ict-0051 ENSSTOP00000004474.2 Ictidomys tridecemlineatus 95 0.0 1541
WERAM-Mum-0141 ENSMUSP00000042265.5 Mus musculus 94 0.0 1540
WERAM-Eqc-0158 ENSECAP00000016787.1 Equus caballus 96 0.0 1540
WERAM-Ran-0235 ENSRNOP00000069275.1 Rattus norvegicus 94 0.0 1535
WERAM-Aim-0054 ENSAMEP00000004386.1 Ailuropoda melanoleuca 94 0.0 1534
WERAM-Bot-0051 ENSBTAP00000005344.4 Bos taurus 94 0.0 1529
WERAM-Sus-0038 ENSSSCP00000006140.2 Sus scrofa 94 0.0 1528
WERAM-Ptv-0013 ENSPVAP00000001940.1 Pteropus vampyrus 94 0.0 1524
WERAM-Dan-0162 ENSDNOP00000018237.1 Dasypus novemcinctus 96 0.0 1519
WERAM-Gog-0096 ENSGGOP00000008136.2 Gorilla gorilla 93 0.0 1514
WERAM-Ova-0057 ENSOARP00000006214.1 Ovis aries 93 0.0 1500
WERAM-Mod-0105 ENSMODP00000015717.3 Monodelphis domestica 91 0.0 1482
WERAM-Vip-0047 ENSVPAP00000004214.1 Vicugna pacos 90 0.0 1454
WERAM-Gaga-0167 ENSGALP00000041753.1 Gallus gallus 87 0.0 1437
WERAM-Meg-0064 ENSMGAP00000006024.2 Meleagris gallopavo 87 0.0 1431
WERAM-Pat-0179 ENSPTRP00000036792.5 Pan troglodytes 96 0.0 1419
WERAM-Ect-0059 ENSETEP00000006428.1 Echinops telfairi 90 0.0 1409
WERAM-Orc-0084 ENSOCUP00000007559.2 Oryctolagus cuniculus 94 0.0 1406
WERAM-Tag-0074 ENSTGUP00000005330.1 Taeniopygia guttata 86 0.0 1399
WERAM-Dio-0046 ENSDORP00000004750.1 Dipodomys ordii 93 0.0 1366
WERAM-Anp-0004 ENSAPLP00000000397.1 Anas platyrhynchos 86 0.0 1360
WERAM-Tub-0105 ENSTBEP00000011996.1 Tupaia belangeri 84 0.0 1349
WERAM-Sah-0204 ENSSHAP00000022249.1 Sarcophilus harrisii 89 0.0 1342
WERAM-Ora-0053 ENSOANP00000008018.1 Ornithorhynchus anatinus 87 0.0 1296
WERAM-Myl-0131 ENSMLUP00000010516.2 Myotis lucifugus 92 0.0 1272
WERAM-Fia-0020 ENSFALP00000001535.1 Ficedula albicollis 88 0.0 1259
WERAM-Tut-0160 ENSTTRP00000013367.1 Tursiops truncatus 89 0.0 1255
WERAM-Lac-0076 ENSLACP00000009959.1 Latimeria chalumnae 72 0.0 1222
WERAM-Soa-0054 ENSSARP00000005355.1 Sorex araneus 84 0.0 1197
WERAM-Fec-0163 ENSFCAP00000025535.1 Felis catus 95 0.0 1162
WERAM-Xet-0042 ENSXETP00000013724.2 Xenopus tropicalis 68 0.0 1123
WERAM-Leo-0050 ENSLOCP00000006815.1 Lepisosteus oculatus 67 0.0 1100
WERAM-Asm-0064 ENSAMXP00000007106.1 Astyanax mexicanus 62 0.0 999
WERAM-Pes-0063 ENSPSIP00000008307.1 Pelodiscus sinensis 89 0.0 927
WERAM-Dar-0157 ENSDARP00000092069.4 Danio rerio 58 0.0 890
WERAM-Gaa-0190 ENSGACP00000023972.1 Gasterosteus aculeatus 52 0.0 848
WERAM-Orn-0158 ENSONIP00000016371.1 Oreochromis niloticus 53 0.0 846
WERAM-Mae-0113 ENSMEUP00000010731.1 Macropus eugenii 89 0.0 832
WERAM-Tar-0065 ENSTRUP00000013163.1 Takifugu rubripes 52 0.0 824
WERAM-Orla-0131 ENSORLP00000015493.1 Oryzias latipes 51 0.0 793
WERAM-Ten-0064 ENSTNIP00000008102.1 Tetraodon nigroviridis 50 0.0 783
WERAM-Pof-0048 ENSPFOP00000003714.1 Poecilia formosa 48 0.0 749
WERAM-Mim-0105 ENSMICP00000009672.1 Microcebus murinus 94 0.0 693
WERAM-Xim-0020 ENSXMAP00000001897.1 Xiphophorus maculatus 49 2e-161 567
WERAM-Gam-0204 ENSGMOP00000019723.1 Gadus morhua 52 6e-155 545
WERAM-Ocp-0015 ENSOPRP00000001613.1 Ochotona princeps 87 4e-153 539
WERAM-Pem-0089 ENSPMAP00000009325.1 Petromyzon marinus 34 9e-55 213
WERAM-Cii-0035 ENSCINP00000013489.3 Ciona intestinalis 22 4e-20 97.8
WERAM-Viv-0101 VIT_16s0098g01030.t01 Vitis vinifera 26 9e-08 56.6
Created Date 25-Jun-2016