WERAM Information

Tag Content
WERAM ID WERAM-Lac-0097
Ensembl Protein ID ENSLACP00000012217.1
Gene Name CBX1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000010753.1 ENSLACT00000012309.1 ENSLACP00000012217.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Chromodomain 2.30e-18 66.3 51 193
Me_Reader DCD 1.20e-35 108.5 52 106
Organism Latimeria chalumnae
Domain Profile
  Me_Reader Chromodomain
      Chromodomain.txt   2 everivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefekkke 53 
                            ve+++ ++++ kg+veYl +WkG++++d+tWepeenL c+ l++ef + ++
  ENSLACP00000012217.1  51 VVEKVL-DRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQK 101
                           599999.99999***********************************77654 PP
      Chromodomain.txt   4 erivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefek 50 
                           eri+   +   ge  +l +Wk+ ++ d     e n++c++++  f +
  ENSLACP00000012217.1 148 ERII-GATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYE 193
                           5566.4555678999*******9999988888999999999988866 PP
  Me_Reader DCD
          Chromo-2.txt   3 verIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeeresmrge 60 
                           ve++++     kG+++yL+kWk+      +we++  en ++p l+ +f  ++++ ++ 
  ENSLACP00000012217.1  52 VEKVLDRR-VVKGKVEYLLKWKGFSDEDNTWEPE--ENLDCPDLIAEFLQSQKTAHET 106
                           77788877.689***********98888899986..799***********99999875 PP
          Chromo-2.txt   2 mverIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeeresmrgee 61 
                           ++erIi+++ d++Gel++L+kWk++  dea++++a+++n k+pq+v+sfyeer+++++++
  ENSLACP00000012217.1 146 EPERIIGAT-DSSGELMFLMKWKNS--DEADLVPAKEANIKCPQVVISFYEERLTWHSYP 202
                           79*******.***************..******************************986 PP
Protein Sequence
(Fasta)		MSEVRLRTDP AGPFAVAAAP PTVGKLASTM GKKQNKKKVE EVLEEEEEEY VVEKVLDRRV 60
VKGKVEYLLK WKGFSDEDNT WEPEENLDCP DLIAEFLQSQ KTAHETDRSE TSKRKQESDT 120
ETGEESRAKK KKEEPEKPRG FARGLEPERI IGATDSSGEL MFLMKWKNSD EADLVPAKEA 180
NIKCPQVVIS FYEERLTWHS YPSEDDDKKE EKN 213
Nucleotide Sequence
(Fasta)		TGAAGACGTA TCGGAGCTGT CTCTCCGTCT CTTTTGTTTC GCGGAGAATA AAAAGGAATA 60
AAAAGGCCGG GAAGAGCCTG GCGGCGGAGG GAGACGGCGC GCGAGTCAGC CCGAGTGAGG 120
AAACCCCGTG AGGCGAATCC CGCCGCCATT CTCTGTCCTT TTCTCTTCCG CGCGCGGCGG 180
CTCGAGAACG AGATAGTTCC TCCGCCGCAG ACACAACAGC ATCAACTCGG CCGCTTCCCG 240
CCAACCGTCC TGTCTTATCT CGCCGGCGCT TTGCTCAGGA CAAGTAAAAC CTTTATTTGA 300
GTTGTTCCGG CTCCCAAATT TGCCAGTCTT TAAACATGAG TGAGGTGAGG CTCCGTACTG 360
ACCCCGCCGG TCCCTTTGCT GTTGCAGCAG CGCCACCTAC AGTCGGTAAA CTGGCCAGCA 420
CAATGGGAAA GAAGCAGAAC AAGAAGAAGG TGGAGGAGGT GCTGGAGGAG GAAGAGGAGG 480
AGTACGTAGT GGAGAAGGTG CTGGACAGGA GAGTGGTGAA AGGGAAAGTG GAGTACCTGC 540
TCAAGTGGAA AGGCTTCTCC GATGAAGACA ACACGTGGGA GCCAGAAGAG AATCTGGATT 600
GTCCTGATCT GATTGCAGAG TTCCTCCAGT CTCAGAAAAC GGCACATGAG ACTGACCGGA 660
GTGAGACAAG TAAGCGGAAA CAAGAGTCTG ACACAGAGAC TGGAGAGGAG AGCCGAGCCA 720
AGAAAAAGAA AGAGGAGCCA GAAAAACCCA GAGGATTCGC CAGGGGCTTG GAACCCGAAC 780
GCATCATCGG AGCAACAGAT TCCAGCGGAG AGCTCATGTT CTTAATGAAA TGGAAAAACT 840
CAGATGAGGC CGACCTGGTC CCTGCCAAGG AAGCCAATAT CAAGTGTCCC CAAGTTGTCA 900
TTTCCTTTTA CGAAGAGAGG CTGACGTGGC ACTCCTACCC CTCTGAGGAT GACGACAAAA 960
AGGAAGAGAA AAATTAACTG GGATCTCACC AGCCGTTCTG TCTTTGTACA CGCATCTGAT 1020
CATGGATTTT GGGGGGAGGG AAAGGGGGGG TTCAGTTGAG CTAACTGTAC AGTGCTGATG 1080
TTGGAAGAGT GGGTGGGGGT AGGGGAGGGA GGGCCTTTTA AAGCAGCAGT ACCTGGAGAT 1140
TCTCAGTAAT TGTTAGTCCA GGGGAATCCC TGCCACTGGG AGCAGGTCAG AGTGTAAAAC 1200
ACAGTGTGTA TGTGTCTCGG CCTGAAGCTT GAGCTGGCTT TCTTTTTAAA TCAGGTTAAA 1260
GGAGTCTGCA GTTTGAAAGG CCTTTTCTGA ACCTTTGCCT CATTTTCAAT AGTGTTACTT 1320
TTTTTTTCCT TTTTAAAGAG AGACACAGTA GCATGTATAT CACTTTTGAC AGATTGTGGT 1380
ATGGGGTGGG GTAATTTCTA TGTTTTTATT AGATCCAGCT AAACCTTGCT GTCAGGAGCT 1440
TTTACTCAGC ATTTTACACT TGTGTTTGTT GGGGGGGGGG GGGGGGGTGC AGAAGGCCTG 1500
TGTTTGGATA TGTCTGTGAT GAGAACTCAT TTTAAACGTA TAGTGTGATA AACTTTTTCT 1560
TTCTTCCTCT GTCTTATCAG TTTTGTCCAA ATAAAATTTT AGATTTATAA ACCTGGCTCT 1620
TACCCTTCCC ATGAAAAAAA GGAATTCCAT GTTTCTTATC CTTCCTGCTT TCTCTAGGAC 1680
TAACCTGTAC AGTTTTTGTC TCCTTCAGGA AATTTGTTGT AATATAAAAA GCTGCAATAG 1740
TTGTAAAATG GTGTTTTGCA GAAATGACTT TTCTGTGTGC TGCATTTTAA ATAACCTGGA 1800
ATACAAAGTA AAACTGAATC TGTTCCTGTG CACAACAAAT GCGGTGAGAA ATATTTCCTA 1860
CGCAACCCCC CCCCCCCAAA CTATTTTTTA AGCATGTGAA GTTAAATGTT TTTACTGACA 1920
AAAAGGGGGA GCTGAAGCTT GAATTCCAAA TGGCCTGTTT CTTAGAGTCA CAGTTGAACA 1980
GGTATTCCTT CTACCACCTA CCCAACCCCC CCCCCTGCAT GTTAAGTAGC AGTTCTGTGG 2040
AGAAATATCT CCATGTATTT ATTTCAGTTG GTATGAATTA GCACCCTTGT TGGCAATCAC 2100
CAGAGAGTCC CAGCTGTTGG TTGCAGTGGT GTATCGGGGG TGATGCTTGG CTAAGGCACT 2160
GACATATTAT AGAGGTGATG CTGGGGGGTG GGCTCTGGAT CCTCCCTCCT ACAACACTTT 2220
GTAAGAGACT CAGAAGGCAG CTGGGGTGAT GGAATGAAAC ATAGGGAATT AGTAAAATGG 2280
AATCAACAGC TGGACAGTAG TGTGGGGTTT TTTTTTGGGG GGGGGGTAAT ATAGCCAGAG 2340
CAATGTGGGG AAGCTTGCAC TGCTGTACCT GTTCTGTGCC ATAAAAGAGA GAACTTCAGT 2400
TGGTGGTGTT CAGTCTGGCA CCTTTCACAA GCACAAACAT TTATAAGAAA CATTTTTAAA 2460
AAAGAACCAC CACCTTTAGC TTTTTTTTTT TTTTTTAAAA AAAATTCAAT TACTGCTGTC 2520
AGCTCTAACA TTAGTGGAAC GATGGCATTT GTTTTGTTGG AATGTGCTCT TATAAGGCTG 2580
CTCGAACAGA AGCAGTAAAT CTGCAGTATG TCATTAGAAA TTGAAGTGGC AGGCTGCCCT 2640
AGGCGTACAA ACACTTGCTC CTACCCTTCT GGAGGCCAGG GTTTGATCCT GAAGGAGGGA 2700
GGGGACTTCC GATGCCTAAG ATGGCAAGAT TGAAAACAGG GTGGAGGCAA ATGCTCTTGA 2760
TCTCAGGGGA GGGAGACTGG CTCCTCCCCT GGCTAGTACC ACCCAGTGGC AGACTCTGGA 2820
GTAGCACTAG CAGTGCCTGG AAAGCCAGCC ACGAATGCTG CCCTTCCCCA CCGTAAGACT 2880
GTGTGCAGGG AGGAGTCAGC ACAGCTTTGG GGGGGGGGGG GAATCAGGCC AGCAGCAAGG 2940
GGGGCATTCT GGGCCCCAGT TTCCCAGGAT GGAGCCAAGC CCCATTGGGG CCCCACAGCA 3000
TCAGGGGAAG AACCCACGCT GGTAAGTGAA AAGGCCAGAT AAAGAAGCTG AAGTGGCATT 3060
TTTGTTGGCA CTCTCCTCCC TGAGGAGACA ATGGGCATAA AGACTGAGCT TCTCCCCCCC 3120
TTCTCCAACA AAAGAAAAAA AAACCCAGTG AGGTAGTGAC TCTAGGGAAA CAGTTGTTGT 3180
ACTGCACTTC CTGTTGGGTG AAGAAAGACT TCTGGGTAGG AGAATGCTGT CAATCCAGCA 3240
CCTTTCATTA TTCACCAGAA AGGAAAAAGC AGAATGAATA AAAACACAAA TTAAACACAA 3300
ATCTTTTAGT CTTTTATGAA GCGGTAACTA AAGAGATGGA GAAAGGTAAT GCGGTAGATG 3360
TTATATTCTT AGATTTTAGC AAAGCCTTTG ACACGGTGCC TCATAAGAGG CTTCTGCTAA 3420
AATTGAAAGA CACTGGTATT GGTGGAAATT TATTCTGCTG GATAN 3466
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Xet-0140 ENSXETP00000047517.3 Xenopus tropicalis 87 6e-76 280
WERAM-Anp-0066 ENSAPLP00000007544.1 Anas platyrhynchos 94 7e-75 276
WERAM-Leo-0134 ENSLOCP00000016544.1 Lepisosteus oculatus 91 4e-74 274
WERAM-Gaga-0002 ENSGALP00000029248.3 Gallus gallus 92 1e-73 273
WERAM-Pes-0067 ENSPSIP00000008496.1 Pelodiscus sinensis 92 1e-73 273
WERAM-Ora-0043 ENSOANP00000006668.1 Ornithorhynchus anatinus 90 2e-72 268
WERAM-Meg-0009 ENSMGAP00000000674.1 Meleagris gallopavo 92 9e-72 266
WERAM-Anc-0067 ENSACAP00000006455.3 Anolis carolinensis 92 9e-72 266
WERAM-Cap-0101 ENSCPOP00000007559.2 Cavia porcellus 93 2e-71 265
WERAM-Chs-0031 ENSCSAP00000015496.1 Chlorocebus sabaeus 92 1e-70 263
WERAM-Otg-0070 ENSOGAP00000005054.2 Otolemur garnettii 92 1e-70 262
WERAM-Paa-0176 ENSPANP00000020092.1 Papio anubis 88 4e-70 261
WERAM-Poa-0134 ENSPPYP00000016983.1 Pongo abelii 92 2e-69 258
WERAM-Sus-0133 ENSSSCP00000018577.2 Sus scrofa 92 4e-69 258
WERAM-Ptv-0018 ENSPVAP00000002428.1 Pteropus vampyrus 92 4e-69 258
WERAM-Pat-0207 ENSPTRP00000060849.1 Pan troglodytes 92 4e-69 258
WERAM-Ova-0073 ENSOARP00000007830.1 Ovis aries 92 4e-69 258
WERAM-Ocp-0040 ENSOPRP00000003390.1 Ochotona princeps 92 4e-69 258
WERAM-Nol-0025 ENSNLEP00000002985.1 Nomascus leucogenys 92 4e-69 258
WERAM-Mup-0175 ENSMPUP00000015192.1 Mustela putorius furo 92 4e-69 258
WERAM-Mim-0093 ENSMICP00000008652.1 Microcebus murinus 92 4e-69 258
WERAM-Loa-0168 ENSLAFP00000015531.2 Loxodonta africana 92 4e-69 258
WERAM-Ict-0173 ENSSTOP00000021591.1 Ictidomys tridecemlineatus 92 4e-69 258
WERAM-Hos-0072 ENSP00000225603.4 Homo sapiens 92 4e-69 258
WERAM-Fec-0063 ENSFCAP00000005628.1 Felis catus 92 4e-69 258
WERAM-Eqc-0041 ENSECAP00000006035.1 Equus caballus 92 4e-69 258
WERAM-Ect-0002 ENSETEP00000000152.1 Echinops telfairi 92 4e-69 258
WERAM-Dio-0002 ENSDORP00000000668.1 Dipodomys ordii 92 4e-69 258
WERAM-Chh-0093 ENSCHOP00000010569.1 Choloepus hoffmanni 92 4e-69 258
WERAM-Caf-0175 ENSCAFP00000024749.3 Canis familiaris 92 4e-69 258
WERAM-Bot-0038 ENSBTAP00000056404.1 Bos taurus 92 4e-69 258
WERAM-Tub-0117 ENSTBEP00000012952.1 Tupaia belangeri 91 8e-69 256
WERAM-Ran-0054 ENSRNOP00000011665.2 Rattus norvegicus 91 9e-69 256
WERAM-Sah-0084 ENSSHAP00000009467.1 Sarcophilus harrisii 92 1e-68 256
WERAM-Mod-0103 ENSMODP00000015491.2 Monodelphis domestica 92 1e-68 256
WERAM-Gog-0205 ENSGGOP00000017163.1 Gorilla gorilla 87 1e-68 256
WERAM-Orc-0199 ENSOCUP00000020709.1 Oryctolagus cuniculus 89 1e-68 256
WERAM-Myl-0056 ENSMLUP00000004587.1 Myotis lucifugus 93 3e-68 255
WERAM-Ere-0053 ENSEEUP00000004419.1 Erinaceus europaeus 91 5e-68 254
WERAM-Prc-0029 ENSPCAP00000002216.1 Procavia capensis 91 6e-68 254
WERAM-Caj-0084 ENSCJAP00000014014.2 Callithrix jacchus 84 6e-68 253
WERAM-Soa-0047 ENSSARP00000004394.1 Sorex araneus 85 7e-68 253
WERAM-Mam-0154 ENSMMUP00000021644.2 Macaca mulatta 91 1e-67 253
WERAM-Aim-0059 ENSAMEP00000005159.1 Ailuropoda melanoleuca 83 2e-67 252
WERAM-Dar-0009 ENSDARP00000118656.1 Danio rerio 78 4e-65 244
WERAM-Asm-0160 ENSAMXP00000015994.1 Astyanax mexicanus 77 7e-65 243
WERAM-Ten-0119 ENSTNIP00000002974.1 Tetraodon nigroviridis 82 1e-64 243
WERAM-Tar-0143 ENSTRUP00000030902.1 Takifugu rubripes 81 1e-64 243
WERAM-Orn-0219 ENSONIP00000022937.1 Oreochromis niloticus 80 1e-63 239
WERAM-Orla-0130 ENSORLP00000015474.1 Oryzias latipes 80 3e-63 238
WERAM-Gam-0030 ENSGMOP00000003256.1 Gadus morhua 78 3e-62 235
WERAM-Pof-0256 ENSPFOP00000031018.1 Poecilia formosa 80 2e-61 232
WERAM-Gaa-0031 ENSGACP00000005142.1 Gasterosteus aculeatus 78 2e-60 229
WERAM-Pem-0070 ENSPMAP00000007598.1 Petromyzon marinus 74 4e-60 228
WERAM-Fia-0141 ENSFALP00000011943.1 Ficedula albicollis 92 2e-57 219
WERAM-Xim-0037 ENSXMAP00000003564.1 Xiphophorus maculatus 76 3e-56 215
WERAM-Tas-0042 ENSTSYP00000004328.1 Tarsius syrichta 77 2e-54 208
WERAM-Dan-0163 ENSDNOP00000020767.1 Dasypus novemcinctus 91 7e-54 207
WERAM-Tut-0053 ENSTTRP00000004253.1 Tursiops truncatus 61 1e-52 203
WERAM-Mum-0020 ENSMUSP00000104441.3 Mus musculus 60 3e-52 202
WERAM-Vip-0106 ENSVPAP00000009695.1 Vicugna pacos 69 5e-52 201
WERAM-Tag-0045 ENSTGUP00000002967.1 Taeniopygia guttata 72 3e-51 198
WERAM-Mae-0074 ENSMEUP00000007510.1 Macropus eugenii 57 1e-46 183
WERAM-Cii-0080 ENSCINP00000030026.1 Ciona intestinalis 58 1e-44 176
WERAM-Drm-0034 FBpp0071221 Drosophila melanogaster 59 5e-41 164
WERAM-Cis-0006 ENSCSAVP00000000838.1 Ciona savignyi 46 2e-26 116
WERAM-Cae-0010 K01G5.2a Caenorhabditis elegans 36 6e-17 84.7
Created Date 25-Jun-2016