| Tag |
Content |
| WERAM ID |
WERAM-Cap-0101 |
| Ensembl Protein ID |
ENSCPOP00000007559.2 |
| Gene Name |
CBX1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| Me_Reader |
Chromodomain |
1.30e-18 |
66.8 |
22 |
178 |
| Me_Reader |
DCD |
1.80e-36 |
111.1 |
23 |
78 |
|
| Organism |
Cavia porcellus |
| Domain Profile |
Me_Reader Chromodomain
Chromodomain.txt 2 everivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefekkke 53
ve+++ ++++ kg+veYl +WkG++++d+tWepeenL c+ l++ef + ++
ENSCPOP00000007559.2 22 VVEKVL-DRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQK 72
59****.999*************************************76654 PP
Chromodomain.txt 4 erivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefek 50
eri+ + ge +l +Wk+ ++ d e n +c++++ f +
ENSCPOP00000007559.2 120 ERII-GATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYE 165
5566.4555678999******98888777777778888888777755 PP
Chromodomain.txt 23 WkGynksdd 31
W y+++dd
ENSCPOP00000007559.2 170 WHSYPSEDD 178
999999998 PP
Me_Reader DCD
Chromo-2.txt 3 verIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeeresmrgee 61
ve++++ kG+++yL+kWk+ +we++ en ++p l+ +f ++++ ++ +
ENSCPOP00000007559.2 23 VEKVLDRR-VVKGKVEYLLKWKGFSDEDNTWEPE--ENLDCPDLIAEFLQSQKTAHETD 78
77888877.689***********98888899986..79*************99999865 PP
Chromo-2.txt 2 mverIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeeresmrgee 61
++erIi+++ d++Gel++L+kWk++ dea++++a+++n k+pq+v+sfyeer+++++++
ENSCPOP00000007559.2 118 EPERIIGAT-DSSGELMFLMKWKNS--DEADLVPAKEANVKCPQVVISFYEERLTWHSYP 174
79*******.***************..******************************986 PP
|
Protein Sequence
(Fasta) | LGVLKFFPSV QEGLKKRTFQ YVVEKVLDRR VVKGKVEYLL KWKGFSDEDN TWEPEENLDC 60
PDLIAEFLQS QKTAHETDKS EGGKRKADSD SEDKGEESRP KKKKEESEKP RGFARGLEPE 120
RIIGATDSSG ELMFLMKWKN SDEADLVPAK EANVKCPQVV ISFYEERLTW HSYPSEDDDK 180
KDDKN 185Protein Fasta Sequence
>ENSCPOP00000007559.2|DCD|Cavia porcellus
LGVLKFFPSVQEGLKKRTFQYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESRPKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHSYPSEDDDKKDDKN |
Nucleotide Sequence
(Fasta) | CTTGGAGTCC TTAAGTTTTT TCCTAGTGTT CAGGAAGGAC TAAAGAAAAG AACTTTTCAG 60
TACGTGGTGG AGAAGGTGCT GGACCGCCGC GTGGTGAAGG GCAAGGTGGA GTACCTGCTC 120
AAGTGGAAGG GCTTCTCCGA TGAGGACAAC ACGTGGGAGC CCGAGGAGAA CCTGGACTGC 180
CCCGACCTCA TCGCCGAGTT TCTGCAGTCA CAGAAGACGG CACACGAGAC AGACAAGTCA 240
GAGGGAGGCA AGCGCAAGGC GGACTCAGAC TCGGAGGACA AGGGGGAGGA GAGCAGACCC 300
AAGAAGAAGA AAGAGGAGTC GGAGAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 360
CGAATTATTG GCGCCACGGA CTCCAGTGGA GAGCTGATGT TCCTCATGAA ATGGAAGAAC 420
TCCGACGAGG CTGACCTGGT CCCCGCCAAG GAGGCCAATG TCAAGTGCCC ACAGGTGGTC 480
ATCTCCTTCT ACGAGGAGCG GCTGACGTGG CACTCCTACC CCTCGGAGGA CGATGACAAG 540
AAGGATGACA AGAACTAA
559Nucleotide Fasta Sequence
>ENSCPOP00000007559.2|DCD|Cavia porcellus
CTTGGAGTCCTTAAGTTTTTTCCTAGTGTTCAGGAAGGACTAAAGAAAAGAACTTTTCAGTACGTGGTGGAGAAGGTGCTGGACCGCCGCGTGGTGAAGGGCAAGGTGGAGTACCTGCTCAAGTGGAAGGGCTTCTCCGATGAGGACAACACGTGGGAGCCCGAGGAGAACCTGGACTGCCCCGACCTCATCGCCGAGTTTCTGCAGTCACAGAAGACGGCACACGAGACAGACAAGTCAGAGGGAGGCAAGCGCAAGGCGGACTCAGACTCGGAGGACAAGGGGGAGGAGAGCAGACCCAAGAAGAAGAAAGAGGAGTCGGAGAAGCCACGAGGCTTTGCCCGGGGTTTGGAGCCAGAGCGAATTATTGGCGCCACGGACTCCAGTGGAGAGCTGATGTTCCTCATGAAATGGAAGAACTCCGACGAGGCTGACCTGGTCCCCGCCAAGGAGGCCAATGTCAAGTGCCCACAGGTGGTCATCTCCTTCTACGAGGAGCGGCTGACGTGGCACTCCTACCCCTCGGAGGACGATGACAAGAAGGATGACAAGAACTAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
