Tag |
Content |
WERAM ID |
WERAM-Caj-0060 |
Ensembl Protein ID |
ENSCJAP00000010405.2 |
Gene Name |
KDM1A |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDM |
LSD1_KDM1 |
2.60e-211 |
704.5 |
224 |
852 |
|
Organism |
Callithrix jacchus |
Domain Profile |
HDM LSD1_KDM1
LSD1.txt 163 laesenkleeklqllvaelksfvylssrdkkiLsws.lavael.envyPlstldl 215 + + + ++e +lq l+a +s+ l r + +L+ + l + + + + Pl t ++ ENSCJAP00000010405.2 224 NPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHgLINFGIyKRIKPLPTKKT 278 5667889999***************999999999874444433467777766655 PP LSD1.txt 1 lppkvvilEAkeRvGGri..yskavpvsdleasevsslasnsnavssksvnlelkkvkdkstldsdpLyelssqqlslekvemveref. 86 ++++v++lEA++RvGGr+ ++k+++v+dl+a++v++l++n++av+sk+vn+el+k+k+k+ pLye+++q++++ek+emve+ef ENSCJAP00000010405.2 300 FGMDVTLLEARDRVGGRVatFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKC-----PLYEANGQAVPKEKDEMVEQEFn 383 79***********************************************************.....*********************** PP LSD1.txt 87 ........vlheldtkvld............vvevqklfvlfeklleyvkvvkskeelkelinkeeslkikileqiqly.......... 145 ++h+ld++vl+ v+++q+++v++e++++++k+vk++eelkel+nk+++lk+ki+e++q+y ENSCJAP00000010405.2 384 rlleatsyLSHQLDFNVLNnkpvslgqalevVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYkeasevkppr 472 ***************************************************************************************** PP LSD1.txt 146 .isiEalpkslkkdLsel......laesenkleeklqllvaelksfvylssrdkkiLswslavaelenvyPlstldl.......dlell 220 i++E+l+ks+++dL++l lae+++kleeklq+l+a+++s+vylssrd++iL+w++a++e++n++Plstl+l d+e++ ENSCJAP00000010405.2 473 dITAEFLVKSKHRDLTALckeydeLAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLkhwdqddDFEFT 561 ***************************************************************************************** PP LSD1.txt 221 gekvavrrGlsdlpvaLastPspLdiklekavrkvkleddkvelsavness......ykvDkvvialpldklksq..lieFePpLpefk 301 g++++vr+G+s++pvaLa ++Ldikl++avr+v+++++++e++avn++s yk+D+v+++lpl++lk+q +++F+PpLpe+k ENSCJAP00000010405.2 562 GSHLTVRNGYSCVPVALA---EGLDIKLNTAVRQVRYTASGCEVIAVNTRStsqtfiYKCDAVLCTLPLGVLKQQppAVQFVPPLPEWK 647 ******************...******************************************************************** PP LSD1.txt 302 tkaikridFknlkKviLifkaaFWepnislFGsvpkstarelifdevlrfwnllkePiLlalvkveaidimenisddviqglvsailkv 390 t+a++r++F+nl+Kv+L+f+++FW+p+++lFG+v+++ta++ +e+++fwnl+k+PiLlalv++ea++imenisddvi+g+++ailk+ ENSCJAP00000010405.2 648 TSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASR---GELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKG 733 *****************************************...********************************************* PP LSD1.txt 391 ikgkseaadpletvvsnWeadslt 414 i+g+s++++p+etvvs+W+ad ++ ENSCJAP00000010405.2 734 IFGSSAVPQPKETVVSRWRADPWA 757 ********************8654 PP LSD1.txt 537 lLvaellgpsPepPskPsanPyLlyqktqwhvckaladedkrrltGdstaratknevrakLgktlReldslgkqplvdeiaarReayag 625 L+a++++p+P++P++P+++P+L++ +G++t+r+++++v+++L+++lRe++++++q+l+++++++R+a++g ENSCJAP00000010405.2 774 DLMAQPITPGPSIPGAPQPIPRLFF-------------------AGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATPG 843 59***********************...................********************************************* PP LSD1.txt 626 klaeyqrsi 634 ++a++++s+ ENSCJAP00000010405.2 844 VPAQQSPSM 852 ******997 PP
|
Protein Sequence (Fasta) | MLSGKKAAAA AAAAAAAAAG TEAGPGTAGS AENGSEVAAP PAGLSGPAEV GPGAAGERTP 60 RKKEPPRASP PGGLAEPPGS AGPQAGPTVV PGSATPMETG IAETPEGRRT SRRKRAKVEY 120 REMDESLANL SEDEYYSEEE RNAKAEKEKK LPPPPPQAPP EEENESEPEE PSGVEGAAFQ 180 SRLPHDRMTS QEAACFPDII SGPQQTQKVF LFIRNRTLQL WLDNPKIQLT FEATLQQLEA 240 PYNSDTVLVH RVHSYLERHG LINFGIYKRI KPLPTKKTGK VIIIGSGVSG LAAARQLQSF 300 GMDVTLLEAR DRVGGRVATF RKGNYVADLG AMVVTGLGGN PMAVVSKQVN MELAKIKQKC 360 PLYEANGQAV PKEKDEMVEQ EFNRLLEATS YLSHQLDFNV LNNKPVSLGQ ALEVVIQLQE 420 KHVKDEQIEH WKKIVKTQEE LKELLNKMVN LKEKIKELHQ QYKEASEVKP PRDITAEFLV 480 KSKHRDLTAL CKEYDELAET QGKLEEKLQE LEANPPSDVY LSSRDRQILD WHFANLEFAN 540 ATPLSTLSLK HWDQDDDFEF TGSHLTVRNG YSCVPVALAE GLDIKLNTAV RQVRYTASGC 600 EVIAVNTRST SQTFIYKCDA VLCTLPLGVL KQQPPAVQFV PPLPEWKTSA VQRMGFGNLN 660 KVVLCFDRVF WDPSVNLFGH VGSTTASRGE LFLFWNLYKA PILLALVAGE AAGIMENISD 720 DVIVGRCLAI LKGIFGSSAV PQPKETVVSR WRADPWARGS YSYVAAGSSG NDYDLMAQPI 780 TPGPSIPGAP QPIPRLFFAG EHTIRNYPAT VHGALLSGLR EAGRIADQFL GAMYTLPRQA 840 TPGVPAQQSP SM 852Protein Fasta Sequence
>ENSCJAP00000010405.2|LSD1_KDM1|Callithrix jacchus MLSGKKAAAAAAAAAAAAAGTEAGPGTAGSAENGSEVAAPPAGLSGPAEVGPGAAGERTPRKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATPGVPAQQSPSM
|
Nucleotide Sequence (Fasta) | GGCGCGGCGG GAGCGCGCTT AGCGCTTGCG TACGCGACGG CGGTTGGCGG CGCGCGGGCG 60 ACGTGAAGCG AGGCGAGTCG AGGCGGTTCG GACCCACGGA GCGACAGACC GAGCGGCCCC 120 TACGGCCGTC GGCGGCCCGG CGGCCCGAGA TGTTGTCTGG GAAGAAGGCT GCAGCCGCAG 180 CGGCGGCGGC TGCAGCGGCG GCAGCCGGGA CGGAGGCTGG CCCCGGGACT GCGGGCAGTG 240 CCGAGAACGG CTCTGAGGTG GCCGCGCCGC CCGCGGGCCT GTCGGGCCCA GCCGAGGTCG 300 GGCCGGGGGC GGCCGGGGAG CGCACGCCCC GCAAGAAAGA GCCTCCGCGG GCCTCGCCCC 360 CCGGGGGCCT GGCCGAACCG CCGGGGTCCG CAGGGCCTCA GGCCGGGCCT ACCGTCGTGC 420 CTGGGTCTGC GACCCCCATG GAAACTGGAA TAGCAGAGAC TCCGGAGGGG CGTCGGACTA 480 GCAGGCGCAA GCGGGCGAAG GTAGAGTACA GAGAGATGGA TGAAAGCTTG GCCAACCTCT 540 CAGAAGATGA GTATTATTCA GAAGAAGAGA GAAATGCTAA AGCAGAGAAG GAAAAGAAGC 600 TTCCCCCACC ACCTCCTCAA GCCCCCCCTG AGGAAGAAAA CGAAAGTGAG CCTGAAGAAC 660 CATCGGGTGT GGAGGGAGCA GCTTTCCAGA GCCGACTTCC TCATGACCGG ATGACTTCTC 720 AGGAAGCAGC CTGTTTTCCA GATATTATCA GTGGACCACA GCAGACCCAG AAAGTTTTTC 780 TGTTCATTAG AAACCGCACG TTGCAGTTGT GGTTGGATAA TCCAAAGATT CAACTGACAT 840 TTGAGGCTAC TCTCCAACAA TTAGAAGCAC CTTATAACAG TGATACTGTA CTTGTCCACC 900 GAGTTCACAG TTATTTGGAG CGTCATGGTC TTATCAACTT TGGCATCTAT AAAAGGATAA 960 AACCCCTACC AACTAAAAAG ACAGGAAAGG TAATTATTAT AGGCTCTGGG GTCTCAGGCT 1020 TGGCAGCAGC TCGACAATTA CAAAGTTTTG GAATGGATGT CACACTTTTG GAAGCCAGGG 1080 ATCGTGTGGG TGGACGAGTT GCTACGTTTC GCAAAGGAAA CTATGTAGCT GATCTTGGAG 1140 CCATGGTGGT CACAGGTCTT GGAGGGAATC CTATGGCTGT TGTCAGCAAA CAAGTAAATA 1200 TGGAACTGGC CAAGATCAAG CAAAAATGCC CACTTTATGA AGCAAACGGA CAAGCTGTTC 1260 CTAAAGAGAA AGATGAAATG GTAGAGCAAG AGTTTAACCG GTTGCTAGAA GCTACATCTT 1320 ACCTTAGTCA TCAGCTAGAC TTCAATGTCC TCAATAATAA GCCTGTGTCC CTTGGCCAGG 1380 CATTGGAAGT TGTCATTCAG TTGCAAGAAA AGCATGTCAA AGATGAACAG ATTGAACATT 1440 GGAAGAAGAT AGTGAAAACT CAGGAAGAAT TGAAAGAACT TCTTAATAAG ATGGTAAATT 1500 TGAAAGAGAA AATTAAAGAA CTCCATCAGC AATACAAAGA AGCATCTGAA GTAAAGCCAC 1560 CCAGAGACAT TACTGCCGAG TTCTTAGTGA AAAGCAAACA CAGGGATCTG ACCGCCCTAT 1620 GCAAGGAATA TGATGAATTA GCTGAAACAC AAGGAAAGCT AGAAGAAAAA CTTCAGGAAC 1680 TGGAAGCGAA TCCTCCGAGT GATGTATATC TCTCCTCAAG AGACAGACAA ATACTTGATT 1740 GGCATTTTGC AAATCTTGAA TTTGCTAATG CCACACCTCT CTCAACTCTC TCCCTTAAAC 1800 ACTGGGATCA GGATGATGAC TTTGAGTTCA CTGGCAGCCA CCTGACGGTG AGGAATGGCT 1860 ACTCATGTGT GCCTGTGGCT TTAGCAGAAG GCCTAGACAT TAAACTGAAT ACAGCAGTGC 1920 GACAGGTTCG CTACACGGCT TCAGGATGTG AAGTGATAGC TGTGAATACC CGCTCCACGA 1980 GTCAAACCTT TATTTATAAA TGCGATGCAG TTCTCTGTAC CCTTCCCCTG GGTGTGCTGA 2040 AGCAGCAGCC ACCAGCTGTT CAGTTTGTGC CACCTCTTCC TGAGTGGAAA ACATCTGCAG 2100 TCCAAAGGAT GGGATTTGGC AACCTTAACA AGGTGGTGTT GTGCTTTGAC CGGGTGTTCT 2160 GGGATCCAAG TGTCAATTTG TTTGGGCATG TTGGCAGTAC GACTGCCAGC AGGGGTGAGC 2220 TCTTCCTCTT CTGGAATCTC TATAAAGCTC CAATACTGTT GGCACTAGTG GCAGGAGAAG 2280 CTGCTGGTAT CATGGAAAAT ATAAGTGATG ATGTGATTGT TGGCCGATGC CTGGCCATTC 2340 TTAAAGGGAT TTTTGGAAGC AGTGCAGTAC CGCAGCCCAA AGAAACTGTG GTGTCTCGTT 2400 GGCGTGCTGA TCCTTGGGCC CGGGGCTCTT ATTCCTATGT TGCTGCAGGA TCATCTGGAA 2460 ATGACTATGA TTTAATGGCT CAGCCAATCA CTCCTGGCCC CTCAATTCCA GGCGCCCCAC 2520 AGCCGATTCC ACGACTCTTC TTTGCGGGAG AACATACGAT CCGTAACTAC CCAGCCACAG 2580 TGCATGGTGC TCTGCTGAGT GGGCTGCGAG AAGCAGGAAG AATTGCAGAC CAGTTTTTGG 2640 GGGCCATGTA TACACTGCCT CGCCAGGCCA CACCAGGTGT TCCTGCACAG CAGTCCCCAA 2700 GCATGTGAGA CAGATACATT GTAAGGGAAG AGACCCATGT GCTTGTCTCA ATGCTGTATA 2760 AGCAAGGCTC TTCTAGCAAT ACTAGGTCCC ACTGAGAACC TCCCACCCTG GCATCTGGGC 2820 TCCTGATTTG ACAAAGGAGC TTGTCTCCTT TGA
2854Nucleotide Fasta Sequence
>ENSCJAP00000010405.2|LSD1_KDM1|Callithrix jacchus GGCGCGGCGGGAGCGCGCTTAGCGCTTGCGTACGCGACGGCGGTTGGCGGCGCGCGGGCGACGTGAAGCGAGGCGAGTCGAGGCGGTTCGGACCCACGGAGCGACAGACCGAGCGGCCCCTACGGCCGTCGGCGGCCCGGCGGCCCGAGATGTTGTCTGGGAAGAAGGCTGCAGCCGCAGCGGCGGCGGCTGCAGCGGCGGCAGCCGGGACGGAGGCTGGCCCCGGGACTGCGGGCAGTGCCGAGAACGGCTCTGAGGTGGCCGCGCCGCCCGCGGGCCTGTCGGGCCCAGCCGAGGTCGGGCCGGGGGCGGCCGGGGAGCGCACGCCCCGCAAGAAAGAGCCTCCGCGGGCCTCGCCCCCCGGGGGCCTGGCCGAACCGCCGGGGTCCGCAGGGCCTCAGGCCGGGCCTACCGTCGTGCCTGGGTCTGCGACCCCCATGGAAACTGGAATAGCAGAGACTCCGGAGGGGCGTCGGACTAGCAGGCGCAAGCGGGCGAAGGTAGAGTACAGAGAGATGGATGAAAGCTTGGCCAACCTCTCAGAAGATGAGTATTATTCAGAAGAAGAGAGAAATGCTAAAGCAGAGAAGGAAAAGAAGCTTCCCCCACCACCTCCTCAAGCCCCCCCTGAGGAAGAAAACGAAAGTGAGCCTGAAGAACCATCGGGTGTGGAGGGAGCAGCTTTCCAGAGCCGACTTCCTCATGACCGGATGACTTCTCAGGAAGCAGCCTGTTTTCCAGATATTATCAGTGGACCACAGCAGACCCAGAAAGTTTTTCTGTTCATTAGAAACCGCACGTTGCAGTTGTGGTTGGATAATCCAAAGATTCAACTGACATTTGAGGCTACTCTCCAACAATTAGAAGCACCTTATAACAGTGATACTGTACTTGTCCACCGAGTTCACAGTTATTTGGAGCGTCATGGTCTTATCAACTTTGGCATCTATAAAAGGATAAAACCCCTACCAACTAAAAAGACAGGAAAGGTAATTATTATAGGCTCTGGGGTCTCAGGCTTGGCAGCAGCTCGACAATTACAAAGTTTTGGAATGGATGTCACACTTTTGGAAGCCAGGGATCGTGTGGGTGGACGAGTTGCTACGTTTCGCAAAGGAAACTATGTAGCTGATCTTGGAGCCATGGTGGTCACAGGTCTTGGAGGGAATCCTATGGCTGTTGTCAGCAAACAAGTAAATATGGAACTGGCCAAGATCAAGCAAAAATGCCCACTTTATGAAGCAAACGGACAAGCTGTTCCTAAAGAGAAAGATGAAATGGTAGAGCAAGAGTTTAACCGGTTGCTAGAAGCTACATCTTACCTTAGTCATCAGCTAGACTTCAATGTCCTCAATAATAAGCCTGTGTCCCTTGGCCAGGCATTGGAAGTTGTCATTCAGTTGCAAGAAAAGCATGTCAAAGATGAACAGATTGAACATTGGAAGAAGATAGTGAAAACTCAGGAAGAATTGAAAGAACTTCTTAATAAGATGGTAAATTTGAAAGAGAAAATTAAAGAACTCCATCAGCAATACAAAGAAGCATCTGAAGTAAAGCCACCCAGAGACATTACTGCCGAGTTCTTAGTGAAAAGCAAACACAGGGATCTGACCGCCCTATGCAAGGAATATGATGAATTAGCTGAAACACAAGGAAAGCTAGAAGAAAAACTTCAGGAACTGGAAGCGAATCCTCCGAGTGATGTATATCTCTCCTCAAGAGACAGACAAATACTTGATTGGCATTTTGCAAATCTTGAATTTGCTAATGCCACACCTCTCTCAACTCTCTCCCTTAAACACTGGGATCAGGATGATGACTTTGAGTTCACTGGCAGCCACCTGACGGTGAGGAATGGCTACTCATGTGTGCCTGTGGCTTTAGCAGAAGGCCTAGACATTAAACTGAATACAGCAGTGCGACAGGTTCGCTACACGGCTTCAGGATGTGAAGTGATAGCTGTGAATACCCGCTCCACGAGTCAAACCTTTATTTATAAATGCGATGCAGTTCTCTGTACCCTTCCCCTGGGTGTGCTGAAGCAGCAGCCACCAGCTGTTCAGTTTGTGCCACCTCTTCCTGAGTGGAAAACATCTGCAGTCCAAAGGATGGGATTTGGCAACCTTAACAAGGTGGTGTTGTGCTTTGACCGGGTGTTCTGGGATCCAAGTGTCAATTTGTTTGGGCATGTTGGCAGTACGACTGCCAGCAGGGGTGAGCTCTTCCTCTTCTGGAATCTCTATAAAGCTCCAATACTGTTGGCACTAGTGGCAGGAGAAGCTGCTGGTATCATGGAAAATATAAGTGATGATGTGATTGTTGGCCGATGCCTGGCCATTCTTAAAGGGATTTTTGGAAGCAGTGCAGTACCGCAGCCCAAAGAAACTGTGGTGTCTCGTTGGCGTGCTGATCCTTGGGCCCGGGGCTCTTATTCCTATGTTGCTGCAGGATCATCTGGAAATGACTATGATTTAATGGCTCAGCCAATCACTCCTGGCCCCTCAATTCCAGGCGCCCCACAGCCGATTCCACGACTCTTCTTTGCGGGAGAACATACGATCCGTAACTACCCAGCCACAGTGCATGGTGCTCTGCTGAGTGGGCTGCGAGAAGCAGGAAGAATTGCAGACCAGTTTTTGGGGGCCATGTATACACTGCCTCGCCAGGCCACACCAGGTGTTCCTGCACAGCAGTCCCCAAGCATGTGAGACAGATACATTGTAAGGGAAGAGACCCATGTGCTTGTCTCAATGCTGTATAAGCAAGGCTCTTCTAGCAATACTAGGTCCCACTGAGAACCTCCCACCCTGGCATCTGGGCTCCTGATTTGACAAAGGAGCTTGTCTCCTTTGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |