WERAM Information

Tag Content
WERAM ID WERAM-Brr-0149
Ensembl Protein ID Bra029664.1-P
Gene Name IBM1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra029664 Bra029664.1 Bra029664.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 7.80e-81 271.7 784 1014
Organism Brassica rapa
Domain Profile
  HDM JHDM2
      JHDM2.txt    4 krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy..............vgilkkkwaeedlkellksieee 83  
                     ++ g+lNLa+klp+++++pd+gPk+y+AyG+a+e +r++++t+lh+d+sdavn+l++              ++ lk k+a +d+kel  s+ + 
  Bra029664.1-P  784 PVSGPLNLAVKLPDFCLKPDMGPKTYVAYGFAQEMGRGDSVTKLHCDMSDAVNVLTHvsevtikeeekkstIEKLKRKHAAQDVKELFGSVPNY 877 
                     478************************************************************************************9877654 PP
      JHDM2.txt   84 ....eldevtr.krvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklg 168 
                         e++e+t+ + v++ + + galW+if+++d++k++++l  ++ke+++    +v+++++pihdqs+yl+r++++ L+eeyG+e+wt+vQklg
  Bra029664.1-P  878 kekiEILENTNeEEVKNLEADGGALWDIFRREDVPKLEKYLLSHHKEFRHffcsPVSKVVHPIHDQSFYLTRYHKMILKEEYGIEPWTFVQKLG 971 
                     455889888862689**********************************99999999************************************* PP
      JHDM2.txt  169 davlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211 
                     davlip+g+pHqv+nlksc kva dFvsPEn++ecfrltkeyr
  Bra029664.1-P  972 DAVLIPVGCPHQVRNLKSCTKVALDFVSPENISECFRLTKEYR 1014
                     ******************************************8 PP
Protein Sequence
(Fasta)		MSSTEEEAIR VVADEEQNPR AVRIRAPRAC TLSTVDYAEP PIDDDDDESK PKAKRGRPRK 60
SPEEDQTTSG TPKAKPGRPR KIPEEVDDKP IRPRKNPEED EKTNGTLKAK PGSPRKEDQT 120
TNDTPKAKPG RPRKNPEEDE KVNGTPKAKR GRPRKNPQED GNTDDKPKAK PARPRKNPEE 180
DAKTDDKPKA KPGRPRKNPE EDQKTDDKPK AKPEEDQKTS DKPGKPRKNP EEEEQKTSDT 240
PKAKPGRPRK YPVNEEGEKS TKKVDQGVIA CLEKKENGAE EIIKASDGMP RFKKVYSRKR 300
PLKEDEDEKK DDELVSKGSV KVTKRPRKVV VRCLNKDEDK AEESECMMCH QCQRNDNGEV 360
VRCQNCCDRK RYCHKCLETW YPRIPHEDIA KKCPFCWNTC NCRACLRLDT KMEGLNSDLK 420
VSKDEEVQCS KYILQKLLPH LKEINDEQVL EKEAEANISG LEFGEVKPED TNCSPGERLY 480
CDSCQTAIFD LHRHCSSCGS DICIACSMEI RKGKLQACQE DVYWNYISRG LDYLHGGKEK 540
IGKPTDDKLE PEPLLAIVKP PSTWKTDEVG LITCCCGEGI LELKRVLPDG WVSELVKKVE 600
ETVEANKLFD LPEMATERCP CFDSEGHIDM DTNKNVLKAA CREGSEDNYL YFPSATDAQE 660
EINLKHFQHH WAKGEPVIVR NVLEATAGLS WEPGVMHRAC RQMRSTKHET LLDVNAIDCL 720
DCCEGSINLH AFFTGYQKGR YDREGWPSVL KLKDWPPSKS FNENLPRHCE EFLCSLPLKQ 780
YTHPVSGPLN LAVKLPDFCL KPDMGPKTYV AYGFAQEMGR GDSVTKLHCD MSDAVNVLTH 840
VSEVTIKEEE KKSTIEKLKR KHAAQDVKEL FGSVPNYKEK IEILENTNEE EVKNLEADGG 900
ALWDIFRRED VPKLEKYLLS HHKEFRHFFC SPVSKVVHPI HDQSFYLTRY HKMILKEEYG 960
IEPWTFVQKL GDAVLIPVGC PHQVRNLKSC TKVALDFVSP ENISECFRLT KEYRLLPPNH 1020
HSKEDKLQIK NMVIFAIDKA LEDLNPNYRS HVAKEEEKKV TKTGRKRKNR EMSNGANVLA 1080
Nucleotide Sequence
(Fasta)		ATGAGTTCTA CAGAGGAGGA AGCTATTAGG GTTGTTGCTG ATGAAGAACA GAATCCACGA 60
GCTGTTCGGA TTAGGGCGCC GAGAGCTTGT ACGTTATCAA CGGTTGATTA CGCCGAGCCT 120
CCGATTGACG ACGATGACGA CGAAAGCAAG CCAAAGGCGA AACGAGGCAG GCCTCGTAAA 180
AGCCCTGAAG AAGACCAAAC GACGAGTGGT ACACCAAAGG CTAAACCGGG TAGGCCTCGG 240
AAGATTCCTG AAGAAGTTGA TGATAAACCG ATCAGGCCTC GTAAAAATCC GGAAGAAGAC 300
GAGAAGACGA ATGGTACACT AAAGGCTAAA CCGGGCAGTC CTCGGAAAGA AGACCAGACG 360
ACGAATGATA CACCCAAGGC TAAACCGGGA AGGCCTCGGA AAAATCCTGA AGAAGACGAG 420
AAGGTGAATG GTACACCAAA GGCTAAACGA GGCAGGCCTC GGAAAAATCC TCAAGAAGAC 480
GGGAATACAG ATGATAAACC GAAGGCTAAA CCGGCCAGGC CTCGAAAAAA TCCTGAAGAA 540
GACGCGAAGA CAGATGATAA ACCGAAGGCT AAACCGGGCA GGCCTCGGAA AAATCCTGAA 600
GAAGACCAGA AGACAGATGA TAAACCGAAG GCTAAACCTG AAGAAGATCA GAAGACAAGT 660
GATAAACCGG GGAAGCCTCG GAAAAATCCG GAAGAAGAAG AGCAGAAGAC GAGTGATACA 720
CCAAAGGCTA AACCGGGAAG GCCTCGGAAG TATCCAGTCA ACGAAGAAGG CGAAAAGTCA 780
ACGAAGAAAG TTGACCAAGG TGTTATCGCT TGTTTAGAGA AGAAGGAGAA TGGAGCTGAA 840
GAGATTATTA AGGCTTCTGA TGGAATGCCA AGGTTCAAGA AGGTTTATTC TCGTAAAAGG 900
CCATTGAAAG AAGACGAAGA CGAGAAGAAG GATGATGAAC TTGTTTCTAA AGGCTCTGTT 960
AAGGTTACTA AGAGGCCTCG GAAAGTGGTG GTACGTTGTC TCAACAAAGA CGAGGATAAA 1020
GCTGAAGAAT CTGAGTGCAT GATGTGTCAT CAATGTCAAC GTAACGATAA TGGGGAGGTT 1080
GTGCGGTGTC AGAACTGCTG CGATAGGAAG CGTTATTGCC ACAAATGCTT AGAAACTTGG 1140
TACCCTCGCA TCCCACATGA AGACATTGCC AAGAAATGCC CGTTTTGCTG GAATACTTGC 1200
AACTGCAGAG CATGCTTGCG TCTAGATACT AAAATGGAAG GGTTAAATTC AGACCTCAAG 1260
GTTAGCAAGG ATGAAGAAGT CCAATGCTCT AAGTATATTC TGCAAAAGCT TCTCCCACAT 1320
CTGAAGGAAA TAAACGATGA ACAAGTTCTT GAGAAGGAAG CTGAGGCAAA TATATCAGGA 1380
CTGGAGTTTG GAGAGGTGAA GCCTGAAGAC ACTAATTGTA GCCCTGGCGA AAGACTATAC 1440
TGTGATAGCT GCCAGACTGC CATCTTTGAC CTTCATAGAC ATTGCTCGAG CTGCGGTTCT 1500
GATATCTGCA TTGCATGTTC CATGGAGATC CGAAAAGGAA AGCTTCAGGC ATGTCAGGAG 1560
GATGTTTACT GGAATTACAT TAGCAGAGGT TTAGATTATC TACATGGAGG AAAAGAAAAA 1620
ATTGGTAAAC CTACGGATGA TAAGCTGGAG CCGGAACCAT TACTTGCTAT TGTCAAGCCC 1680
CCATCTACTT GGAAAACAGA TGAAGTCGGA CTCATTACTT GCTGTTGTGG TGAGGGGATT 1740
TTAGAGTTGA AACGCGTGCT TCCCGATGGT TGGGTATCAG AATTGGTCAA AAAGGTTGAA 1800
GAAACTGTTG AAGCCAACAA GCTTTTTGAT TTACCTGAAA TGGCCACAGA GAGATGCCCT 1860
TGTTTTGACT CTGAAGGTCA TATTGACATG GACACCAACA AAAACGTGTT AAAGGCTGCA 1920
TGTCGAGAAG GATCAGAAGA CAATTATCTA TATTTTCCAA GTGCTACAGA TGCTCAGGAG 1980
GAGATTAATC TGAAGCATTT TCAGCATCAT TGGGCAAAAG GAGAGCCTGT GATTGTGAGG 2040
AACGTGCTTG AGGCTACAGC TGGTTTAAGC TGGGAACCAG GTGTTATGCA TCGTGCTTGC 2100
CGTCAGATGA GAAGCACCAA GCATGAAACA CTTCTGGACG TTAATGCTAT TGATTGTCTA 2160
GACTGCTGTG AGGGATCTAT TAATCTTCAT GCATTCTTTA CCGGTTACCA AAAAGGCCGT 2220
TATGATCGTG AGGGTTGGCC AAGTGTTCTG AAACTGAAAG ATTGGCCTCC ATCGAAGAGC 2280
TTCAATGAAA ACTTGCCGCG TCACTGTGAG GAGTTCTTAT GCAGTTTGCC TTTGAAGCAG 2340
TACACTCACC CGGTTAGTGG GCCTTTAAAT CTTGCCGTGA AGTTGCCTGA TTTTTGCTTG 2400
AAACCGGACA TGGGACCAAA GACTTACGTT GCTTATGGAT TTGCGCAAGA AATGGGCCGT 2460
GGAGATTCAG TAACCAAACT CCACTGCGAC ATGTCTGATG CGGTTAATGT GCTGACCCAC 2520
GTAAGTGAAG TGACCATCAA AGAGGAAGAA AAGAAATCCA CAATAGAAAA ACTGAAGAGG 2580
AAGCATGCTG CACAAGATGT CAAGGAGCTG TTTGGCTCGG TTCCTAACTA CAAGGAAAAG 2640
ATTGAGATTC TTGAAAACAC TAATGAAGAA GAAGTCAAGA ACCTTGAAGC TGATGGAGGA 2700
GCTCTTTGGG ACATTTTCCG TAGAGAAGAT GTTCCAAAAT TAGAGAAATA CCTTCTGAGT 2760
CATCATAAAG AGTTTCGACA TTTCTTCTGT TCCCCCGTCT CTAAGGTGGT TCATCCAATA 2820
CATGACCAGT CTTTCTATCT GACGCGTTAT CATAAAATGA TTCTGAAAGA AGAATACGGC 2880
ATTGAGCCAT GGACGTTTGT TCAGAAGCTT GGAGATGCTG TGTTAATACC TGTAGGCTGC 2940
CCTCATCAAG TCAGGAACTT GAAGTCTTGT ACAAAGGTGG CGCTTGACTT TGTCTCACCT 3000
GAAAATATCA GTGAGTGTTT CCGCTTAACA AAGGAGTATC GTCTGCTACC ACCAAACCAT 3060
CATTCAAAAG AGGACAAGTT GCAGATAAAG AATATGGTGA TCTTTGCAAT CGATAAGGCT 3120
CTCGAAGACT TGAATCCAAA TTACAGGTCT CATGTAGCCA AAGAGGAGGA GAAGAAGGTG 3180
ACAAAGACTG GAAGGAAGCG TAAAAACCGT GAGATGAGTA ATGGAGCTAA TGTGTTGGCT 3240
TGA 3244
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0103 Bo5g141320.1 Brassica oleracea 84 0.0 1674
WERAM-Art-0066 AT3G07610.1 Arabidopsis thaliana 65 0.0 987
WERAM-Arl-0040 fgenesh1_pm.C_scaffold_8000499 Arabidopsis lyrata 68 0.0 945
WERAM-Pot-0062 POPTR_0005s08460.1 Populus trichocarpa 56 0.0 778
WERAM-Met-0036 AES62955 Medicago truncatula 54 0.0 753
WERAM-Thc-0088 EOY14163 Theobroma cacao 51 0.0 711
WERAM-Glm-0245 GLYMA19G12090.1 Glycine max 48 0.0 705
WERAM-Viv-0065 VIT_10s0042g00830.t01 Vitis vinifera 50 0.0 659
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 49 0.0 646
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 45 0.0 637
WERAM-Sol-0031 Solyc02g082400.2.1 Solanum lycopersicum 46 1e-177 621
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 44 1e-176 618
WERAM-Sei-0128 Si034182m Setaria italica 45 5e-176 616
WERAM-Prp-0037 EMJ15852 Prunus persica 47 8e-176 615
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 42 1e-157 555
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 42 7e-156 549
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 42 2e-154 544
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 43 7e-154 542
WERAM-Tra-0233 Traes_5DL_9DCF29857.2 Triticum aestivum 46 2e-152 538
WERAM-Aet-0048 EMT13865 Aegilops tauschii 46 3e-152 536
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 48 3e-151 533
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 42 8e-147 519
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 41 6e-141 499
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 41 3e-140 497
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 41 2e-136 484
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 41 1e-135 481
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 47 4e-135 480
WERAM-Amt-0041 ERN17369 Amborella trichopoda 44 2e-125 448
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 44 4e-124 443
WERAM-Mua-0155 GSMUA_AchrUn_randomP11860_001 Musa acuminata 48 5e-124 443
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 44 6e-124 442
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 45 3e-123 440
WERAM-Php-0101 PP1S444_19V6.1 Physcomitrella patens 45 4e-123 440
WERAM-Org-0029 ORGLA02G0333900.1 Oryza glaberrima 44 8e-123 439
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 38 1e-62 239
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 37 9e-62 236
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 36 2e-60 231
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 37 3e-60 231
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 37 4e-60 231
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 36 4e-60 231
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 37 9e-60 229
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 36 2e-59 229
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 36 2e-59 229
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 36 2e-59 229
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 36 2e-59 229
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 36 2e-59 228
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 36 2e-59 228
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 36 2e-59 228
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 36 2e-59 228
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 36 2e-59 228
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 36 2e-59 228
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 36 2e-59 228
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 36 2e-59 228
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 36 2e-59 228
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 36 2e-59 228
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 36 2e-59 228
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 36 2e-59 228
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 36 2e-59 228
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 36 2e-59 228
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 36 2e-59 228
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 36 2e-59 228
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 36 2e-59 228
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 36 2e-59 228
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 36 2e-59 228
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 36 2e-59 228
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 36 3e-59 228
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 36 3e-59 228
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 36 4e-59 228
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 36 4e-59 227
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 37 5e-59 227
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 36 7e-59 226
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 36 8e-59 226
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 36 9e-59 226
WERAM-Cii-0009 ENSCINP00000003397.3 Ciona intestinalis 28 9e-59 226
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 36 1e-58 226
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 37 1e-58 226
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 36 1e-58 225
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 36 2e-58 225
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 36 2e-58 225
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 36 4e-58 224
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 36 9e-58 223
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 36 1e-57 222
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 36 1e-57 222
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 36 2e-57 222
Created Date 25-Jun-2016