WERAM Information

Tag Content
WERAM ID WERAM-Brr-0136
Ensembl Protein ID Bra027290.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra027290 Bra027290.1 Bra027290.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 7.20e-09 36.7 678 772
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    ++C +C   d ge  +++Cd+C+  fH+ C+ ++   lpeg swyC sC+
  Bra027290.1-P 678 DSCGIC--GDGGE--LICCDNCPSTFHQACLAMK--VLPEG-SWYCSSCT 720
                    57****..33332..9******************..*****.*******7 PP
        PHD.txt   4 ClvCg.kddegeke....mvqCdeCddwfHlkCvklplsslpeg..kswyCps 49 
                    C +C+  ++++++      ++C +C + +H+ C++   ++  e+  + ++C +
  Bra027290.1-P 721 CWICReFVSDNAPDdrsqDFKCTQCAHKYHGVCLQERSKR-REPfpETYFCGK 772
                    88995433333222334589***************99332.233446799965 PP
Protein Sequence
(Fasta)		MLPEAEYEML EDDSFEGSYE EHQIFREVFF ASDAGNTTTN KRCLVTGAIN FECDDSSKNV 60
NSSLSSNNDN NSVVTSGLEG SEPSSASKDG SEVNTKAKRA KLSANKNVDE KGSPFTGFQN 120
ADFARDMIPL HLVESSNKGV STSSYLLKQS IEKGKEVYLS GIVSQNVKEC NGKELKAIES 180
PVSQESFATR VFSAGASTPL QLKERTKVSP NELSISKTCL KIDPKEDPRP LLYKYVCKLL 240
ASSRWKIEKR QRSNSKYSET IYVSSQGRKF REFGSAWRSL GEILLADHKL MDTGTKNWTG 300
INDFWSDLSL TLLDIEENMK LLNLENTRAL WWSTLEPFVT AVFVDKKVGS LRKGNKVEVA 360
KNSIVDKFNR EDATCLKLIS GCPESVLTVS ESSLLVYDDE NANQEIRSDL ERKNASSRQE 420
KQKNSVSKVV EASKLIAEGI HESLLRKKSH GRSKKAPLDP TSLECQDKDM GYIHVISEEN 480
GDKRLRNDKM KSSKKGRRKN CNQDDVVFKT KGKDACGIRS SQKKKKAQKS KARTKKKNNR 540
GGCRLLPRST SNGEKQFGQG NWCASGPRTV LSWLIASKVI SKDEVIQLRD PDDDDTVVKT 600
GIVTKEGVVC TCCNRTISLS EFKKHAGFDQ GCPCLNLFMG SGKPFASCQL EAWYAEYKAR 660
RNGSRSEEGY DGDDPNDDSC GICGDGGELI CCDNCPSTFH QACLAMKVLP EGSWYCSSCT 720
CWICREFVSD NAPDDRSQDF KCTQCAHKYH GVCLQERSKR REPFPETYFC GKSCEKVYTG 780
LTSRVGVISS PNADGLSWTV LKCFQEDGKA HSARRLALKA ECNSKLAVAL SVMEECFLSM 840
VDARTGIDMI PHVLYNWGSK FARLDFDGFH TVVVEKNDVM ISVASIRVHG VSVAEMPLVA 900
TCSKYRRQGM CRILVTAIEE MLMSLKVENL VVAALPSLVE TWTEGFGFKT MDDEEREALK 960
RLNLMVFPGT VLLKKTLHQC ANPNTVKGTA SKEADLDNAG FAVTTCNQMV PEGSDDGPPP 1020
GLPVPLGTNQ TEPVAEAEKP AQERNNTKED CLEKELSKFS SQGEEEVKIR TSSSCEVVEE 1080
ERQVSSVAVV NNVSDEMLLC VDEQLDFDSS EDSD 1114
Nucleotide Sequence
(Fasta)		ATGCTTCCCG AAGCTGAGTA TGAGATGTTA GAAGATGATA GCTTTGAGGG GTCATATGAA 60
GAGCATCAGA TATTCAGGGA AGTTTTCTTT GCAAGTGATG CCGGAAACAC TACTACTAAT 120
AAAAGATGTC TTGTTACTGG AGCCATTAAC TTCGAGTGTG ATGATTCCAG TAAGAATGTC 180
AACTCCTCCC TGAGCTCAAA CAATGACAAC AACTCTGTGG TCACAAGTGG CCTAGAAGGT 240
TCTGAGCCAT CATCTGCTTC TAAGGATGGT TCTGAAGTTA ACACAAAAGC TAAAAGAGCC 300
AAGCTTTCTG CTAATAAGAA TGTGGATGAA AAGGGATCGC CTTTTACTGG TTTTCAGAAT 360
GCGGATTTTG CTAGAGATAT GATACCTCTC CATTTAGTCG AGTCATCTAA CAAGGGTGTC 420
TCAACGAGCT CTTATTTGCT GAAGCAAAGC ATAGAAAAGG GAAAAGAAGT TTATCTGAGT 480
GGCATTGTCT CGCAAAACGT GAAAGAATGC AATGGAAAGG AGTTAAAGGC AATTGAGTCT 540
CCTGTTTCTC AGGAGAGCTT CGCAACCAGA GTGTTCTCTG CTGGTGCATC TACTCCACTA 600
CAGTTGAAGG AGAGAACTAA AGTATCTCCT AATGAGTTAA GCATTTCTAA GACTTGTCTA 660
AAGATTGATC CTAAAGAGGA CCCTCGTCCT CTTCTCTACA AGTACGTCTG CAAGTTGCTT 720
GCTTCTTCCA GATGGAAAAT CGAGAAGCGC CAGAGATCCA ATAGTAAATA CTCGGAAACT 780
ATATACGTAT CTTCACAGGG GCGGAAGTTT CGTGAATTTG GGTCAGCCTG GAGATCACTG 840
GGGGAGATCT TACTCGCTGA TCATAAGCTA ATGGATACAG GTACTAAGAA TTGGACAGGT 900
ATCAATGACT TTTGGTCTGA TCTCTCGCTT ACATTGTTGG ACATTGAGGA GAACATGAAA 960
CTGTTGAATC TTGAGAACAC ACGGGCGCTC TGGTGGAGTA CCTTGGAGCC TTTTGTGACT 1020
GCTGTCTTCG TCGATAAGAA AGTTGGTTCT TTAAGAAAAG GAAATAAAGT TGAAGTTGCA 1080
AAGAATTCAA TTGTAGACAA GTTTAATCGA GAGGATGCGA CTTGTCTGAA ATTGATCTCA 1140
GGCTGTCCTG AAAGTGTGCT GACAGTATCT GAGAGCAGTC TTCTTGTTTA TGACGACGAG 1200
AATGCTAACC AAGAGATTCG TTCTGATCTT GAGAGGAAAA ATGCTTCTTC AAGACAAGAG 1260
AAGCAGAAGA ACAGTGTTAG CAAGGTCGTT GAAGCTTCAA AACTGATAGC AGAAGGGATC 1320
CATGAGAGTC TTCTGAGGAA GAAGTCACAC GGAAGATCGA AAAAAGCTCC CTTGGACCCC 1380
ACTAGCCTTG AATGCCAGGA TAAAGATATG GGATACATCC ACGTCATCTC AGAGGAAAAT 1440
GGAGATAAAA GGTTGAGGAA TGATAAGATG AAGAGTTCTA AGAAGGGAAG AAGAAAGAAC 1500
TGTAATCAAG ACGATGTCGT TTTTAAAACC AAAGGTAAGG ATGCCTGTGG AATCAGATCA 1560
AGCCAGAAGA AGAAGAAAGC TCAGAAATCA AAAGCTAGAA CCAAGAAAAA GAATAATAGA 1620
GGAGGGTGCA GGCTCCTTCC TCGAAGCACT AGCAATGGGG AAAAACAATT TGGTCAAGGG 1680
AACTGGTGTG CTTCAGGTCC AAGAACAGTG TTATCATGGT TGATAGCTTC CAAAGTAATC 1740
TCTAAGGACG AAGTAATCCA GTTGCGGGAT CCAGATGATG ATGATACCGT TGTGAAAACA 1800
GGCATCGTGA CTAAAGAGGG AGTGGTCTGC ACATGCTGCA ACAGGACTAT ATCGCTTTCT 1860
GAGTTCAAGA AACATGCTGG ATTCGACCAG GGGTGTCCTT GTCTGAATCT GTTCATGGGA 1920
TCAGGAAAGC CTTTCGCTTC GTGTCAGCTT GAAGCTTGGT ATGCTGAGTA TAAGGCTAGA 1980
AGAAATGGAT CTAGATCAGA GGAAGGTTAT GATGGTGATG ATCCAAATGA TGATTCTTGT 2040
GGAATCTGTG GTGATGGAGG TGAGCTGATC TGCTGTGATA ATTGTCCTTC TACCTTCCAT 2100
CAGGCTTGTT TAGCAATGAA GGTGCTCCCG GAAGGCAGTT GGTATTGCTC AAGCTGCACA 2160
TGTTGGATAT GCAGAGAGTT CGTTAGTGAT AATGCTCCTG ATGACCGCTC TCAGGATTTT 2220
AAGTGTACTC AGTGTGCGCA TAAATATCAT GGAGTATGTC TGCAAGAGAG AAGTAAACGC 2280
AGAGAACCAT TTCCAGAAAC CTACTTTTGT GGTAAAAGTT GCGAGAAGGT GTACACTGGT 2340
CTAACTTCTC GTGTTGGGGT CATATCTTCT CCTAATGCGG ATGGTCTGTC TTGGACGGTT 2400
TTGAAATGTT TTCAAGAAGA TGGAAAGGCT CATTCTGCGC GAAGGTTGGC ATTGAAGGCG 2460
GAATGCAACT CGAAATTAGC TGTTGCTCTA TCGGTTATGG AGGAATGCTT TCTGTCTATG 2520
GTAGATGCAA GAACTGGTAT TGACATGATA CCTCATGTGC TTTACAACTG GGGGTCAAAG 2580
TTTGCTCGCT TAGACTTTGA TGGGTTTCAC ACAGTGGTTG TGGAAAAGAA CGATGTGATG 2640
ATCTCAGTAG CATCCATCAG GGTGCATGGA GTAAGTGTTG CAGAGATGCC TCTTGTAGCT 2700
ACTTGCAGCA AGTATCGTCG TCAGGGAATG TGCAGAATCC TCGTGACTGC AATTGAAGAG 2760
ATGCTTATGT CTCTCAAAGT GGAGAATCTT GTTGTGGCAG CGTTGCCAAG TTTAGTGGAA 2820
ACATGGACTG AAGGTTTCGG CTTCAAAACC ATGGATGATG AAGAACGCGA AGCTCTCAAA 2880
AGACTAAACT TGATGGTGTT CCCAGGTACA GTTCTTCTCA AGAAAACGCT ACACCAGTGC 2940
GCAAATCCCA ACACTGTGAA AGGTACAGCC AGCAAAGAAG CAGATCTAGA CAATGCCGGG 3000
TTTGCCGTGA CGACCTGCAA TCAGATGGTT CCAGAAGGAT CAGATGATGG ACCTCCCCCA 3060
GGCTTACCAG TGCCACTTGG AACCAACCAA ACAGAACCAG TGGCAGAAGC AGAGAAGCCA 3120
GCCCAAGAGA GGAACAACAC CAAAGAAGAT TGTTTGGAGA AGGAACTGTC AAAGTTTTCA 3180
TCACAAGGAG AAGAAGAAGT GAAGATAAGA ACTTCTTCAT CCTGTGAAGT TGTAGAAGAA 3240
GAGAGGCAAG TTAGTAGTGT AGCAGTAGTA AATAATGTTA GTGATGAGAT GTTGCTTTGT 3300
GTTGATGAAC AACTCGACTT TGATAGCTCT GAAGACTCGG ATTAA 3346
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0100 Bo5g127560.1 Brassica oleracea 92 0.0 1908
WERAM-Art-0071 AT3G14980.1 Arabidopsis thaliana 67 0.0 1435
WERAM-Arl-0059 fgenesh2_kg.3__ 1623__ AT3G14980.1 Arabidopsis lyrata 69 0.0 1414
WERAM-Prp-0010 EMJ14932 Prunus persica 64 3e-175 613
WERAM-Thc-0086 EOY13226 Theobroma cacao 63 2e-174 610
WERAM-Glm-0154 GLYMA12G35760.2 Glycine max 60 1e-167 588
WERAM-Viv-0120 VIT_19s0014g01500.t01 Vitis vinifera 59 7e-162 569
WERAM-Met-0046 KEH38626 Medicago truncatula 59 2e-158 558
WERAM-Sol-0097 Solyc07g062600.2.1 Solanum lycopersicum 58 7e-155 545
WERAM-Amt-0045 ERN15883 Amborella trichopoda 56 3e-150 530
WERAM-Sob-0094 Sb06g034065.1 Sorghum bicolor 51 1e-129 461
WERAM-Mua-0094 GSMUA_Achr6P25440_001 Musa acuminata 55 3e-129 461
WERAM-Sei-0077 Si020995m Setaria italica 50 2e-128 457
WERAM-Tru-0009 TRIUR3_05331-P1 Triticum urartu 52 2e-127 454
WERAM-Aet-0007 EMT20462 Aegilops tauschii 52 3e-127 454
WERAM-Zem-0025 GRMZM2G038050_P01 Zea mays 50 4e-127 453
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 49 2e-125 448
WERAM-Orbr-0058 OB04G37750.1 Oryza brachyantha 50 1e-124 445
WERAM-Tra-0043 Traes_2AL_F68D162A8.2 Triticum aestivum 51 6e-124 442
WERAM-Sot-0038 PGSC0003DMT400032367 Solanum tuberosum 60 1e-123 441
WERAM-Hov-0086 MLOC_65889.1 Hordeum vulgare 50 2e-121 434
WERAM-Orb-0048 OBART04G30730.1 Oryza barthii 49 6e-120 429
WERAM-Orr-0048 ORUFI04G32440.1 Oryza rufipogon 49 8e-120 429
WERAM-Orni-0045 ONIVA04G29920.1 Oryza nivara 49 9e-120 429
WERAM-Orgl-0047 OGLUM04G30610.1 Oryza glumaepatula 49 9e-120 429
WERAM-Orl-0058 KN539151.1_FGP008 Oryza longistaminata 51 9e-113 405
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 54 3e-97 354
WERAM-Org-0048 ORGLA04G0270900.1 Oryza glaberrima 54 4e-97 354
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 44 3e-95 347
WERAM-Ori-0046 BGIOSGA014033-PA Oryza indica 53 7e-94 343
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 40 9e-93 339
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 38 4e-91 334
WERAM-Orm-0068 OMERI07G03260.1 Oryza meridionalis 39 5e-91 333
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 38 1e-89 328
WERAM-Pot-0028 POPTR_0002s11940.1 Populus trichocarpa 35 3e-70 265
WERAM-Gaga-0012 ENSGALP00000040523.2 Gallus gallus 51 3e-12 72.4
WERAM-Meg-0017 ENSMGAP00000001394.2 Meleagris gallopavo 49 3e-12 72.0
WERAM-Myl-0123 ENSMLUP00000009992.2 Myotis lucifugus 59 7e-12 70.9
WERAM-Caj-0141 ENSCJAP00000025299.2 Callithrix jacchus 59 7e-12 70.9
WERAM-Gog-0061 ENSGGOP00000005561.2 Gorilla gorilla 48 9e-12 70.5
WERAM-Hos-0171 ENSP00000291582.5 Homo sapiens 48 9e-12 70.5
WERAM-Tar-0001 ENSTRUP00000000282.1 Takifugu rubripes 42 1e-11 70.1
WERAM-Orn-0079 ENSONIP00000008816.1 Oreochromis niloticus 45 1e-11 70.1
WERAM-Nol-0023 ENSNLEP00000002601.2 Nomascus leucogenys 59 2e-11 69.7
WERAM-Ptv-0117 ENSPVAP00000010379.1 Pteropus vampyrus 57 2e-11 69.7
WERAM-Ten-0044 ENSTNIP00000001486.1 Tetraodon nigroviridis 42 2e-11 69.7
WERAM-Pat-0115 ENSPTRP00000024049.4 Pan troglodytes 59 2e-11 69.7
WERAM-Tag-0192 ENSTGUP00000017724.1 Taeniopygia guttata 55 2e-11 69.3
WERAM-Sus-0175 ENSSSCP00000026284.1 Sus scrofa 59 2e-11 69.3
WERAM-Gaa-0200 ENSGACP00000024737.1 Gasterosteus aculeatus 45 2e-11 69.3
WERAM-Aim-0121 ENSAMEP00000011418.1 Ailuropoda melanoleuca 59 2e-11 69.3
WERAM-Xim-0007 ENSXMAP00000001083.1 Xiphophorus maculatus 43 2e-11 68.9
WERAM-Prc-0079 ENSPCAP00000007005.1 Procavia capensis 59 2e-11 68.9
WERAM-Pof-0104 ENSPFOP00000009594.2 Poecilia formosa 43 3e-11 68.9
Created Date 25-Jun-2016