WERAM Information

Tag Content
WERAM ID WERAM-Brr-0125
Ensembl Protein ID Bra025262.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra025262 Bra025262.1 Bra025262.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.10e-26 93.7 13 83
Organism Brassica rapa
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt  2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71
                   +h++s++F+ pvd   l+ipdY +iik+PmdL tik++l +g Yssp+ef++Dvrl f+Na++yn+++++v
  Bra025262.1-P 13 SHPHSWVFQAPVDVVkLNIPDYLTIIKHPMDLGTIKKNLASGVYSSPHEFAADVRLTFTNAMTYNPPGHDV 83
                   799*****************************************************************998 PP
Protein Sequence
(Fasta)		MKQCDTLLKK LWSHPHSWVF QAPVDVVKLN IPDYLTIIKH PMDLGTIKKN LASGVYSSPH 60
EFAADVRLTF TNAMTYNPPG HDVHIMGDIL SKLFEARWKA IEKKLPVTLP AVTVEPREEK 120
RAAVFVPPAK KRKMASSPVR ESVPEPVKAL VMTAEERHRL GRQLESLLEE LPAQIIDFLK 180
KHSSNGGEIA EDEIEIDIDV LSDEVLFSLK KLLDEHIQDK EAKQSNVEPC EIELPKGSGP 240
SSSLLQRGNE MADEYVGGNE PPISRSSSDS ESGSSEDQSD DAKPIIQEGG SKIPETTNSE 300
AQRDEDTRID DLLNGSESNG APEQMDISTQ QKPSSDETDG QPDGNTLENP VSSEKKYRAA 360
LLKNKFADII LKAREKTLPQ NSNKGDPEKL RKEREELELK KKKERARLQA EAEAAENARR 420
QAEAEAAAEA AAESKRQREV EREAARQALL KMEKTVEINE NSRFLEDLEM LRSSVPEQLL 480
SSVDEISPER TLDALGSFNL GGMNPLEQLG LYMKQDDDED EPEAPPTVPK LATDVEEGEI 540
D 541
Nucleotide Sequence
(Fasta)		ATGAAGCAAT GCGACACGTT GCTGAAAAAG CTTTGGTCCC ATCCGCATTC TTGGGTTTTT 60
CAGGCGCCGG TTGATGTGGT GAAGCTTAAC ATACCGGACT ATCTCACTAT CATCAAGCAT 120
CCCATGGACT TGGGGACGAT AAAGAAGAAC TTAGCGTCTG GTGTATACTC AAGCCCACAT 180
GAGTTTGCTG CTGATGTGAG GCTTACATTT ACAAACGCGA TGACGTATAA CCCTCCAGGG 240
CATGATGTTC ACATCATGGG GGATATCCTA AGTAAACTGT TCGAAGCAAG GTGGAAAGCT 300
ATCGAAAAGA AACTACCAGT GACTCTGCCT GCAGTCACAG TGGAGCCTCG TGAAGAGAAG 360
AGAGCTGCTG TATTTGTTCC TCCGGCGAAG AAGAGAAAGA TGGCTTCTTC ACCTGTTAGA 420
GAGAGTGTTC CTGAGCCAGT GAAGGCACTT GTGATGACAG CAGAGGAGAG GCATAGATTG 480
GGGAGACAAC TCGAGTCACT ACTGGAGGAA CTTCCTGCGC AGATCATTGA CTTCTTGAAG 540
AAGCACAGTT CAAATGGAGG AGAAATTGCG GAAGATGAGA TCGAGATAGA CATCGATGTT 600
CTCAGTGATG AAGTACTGTT CAGTCTTAAA AAGCTTCTGG ATGAACACAT CCAAGATAAA 660
GAAGCGAAGC AGTCGAACGT TGAACCTTGT GAAATAGAGC TTCCCAAAGG ATCAGGACCG 720
AGCAGTTCGT TGCTGCAACG AGGAAATGAA ATGGCTGATG AGTATGTCGG TGGAAACGAA 780
CCTCCTATCT CAAGGAGCTC CAGTGATTCT GAGTCTGGGA GCTCTGAAGA TCAATCTGAT 840
GACGCTAAAC CAATCATCCA AGAGGGTGGT TCCAAGATAC CTGAAACTAC AAATTCCGAG 900
GCTCAAAGAG ATGAAGACAC GAGGATCGAT GATCTTCTTA ATGGAAGTGA ATCTAATGGT 960
GCTCCGGAGC AAATGGATAT TTCAACTCAG CAAAAGCCTA GTTCTGATGA AACAGATGGT 1020
CAGCCTGATG GAAATACATT GGAGAATCCG GTTTCATCTG AGAAGAAATA TAGAGCTGCG 1080
CTGTTGAAGA ACAAGTTTGC AGATATCATT CTAAAAGCAC GCGAGAAAAC ACTTCCACAG 1140
AATAGTAATA AGGGCGACCC GGAAAAGCTT CGTAAGGAAA GAGAAGAACT CGAACTGAAG 1200
AAGAAGAAAG AGAGAGCACG GCTACAAGCT GAGGCAGAGG CAGCTGAAAA TGCTCGTCGC 1260
CAAGCCGAAG CAGAGGCCGC TGCAGAAGCC GCTGCTGAGT CTAAGCGGCA GAGAGAAGTT 1320
GAAAGAGAAG CCGCTCGCCA AGCTTTATTG AAGATGGAGA AAACTGTAGA GATCAACGAG 1380
AACTCGCGGT TCCTCGAGGA CCTAGAGATG CTTAGATCAA GTGTGCCGGA GCAACTGCTT 1440
AGCTCAGTAG ATGAAATCAG CCCCGAGAGA ACTTTAGACG CCCTTGGAAG TTTCAACCTC 1500
GGAGGAATGA ACCCTCTTGA GCAACTCGGA CTGTATATGA AACAAGATGA TGATGAAGAT 1560
GAGCCCGAGG CCCCTCCTAC TGTTCCAAAA CTAGCCACAG ACGTGGAAGA AGGTGAAATC 1620
GATTGA 1627
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0129 Bo7g084380.1 Brassica oleracea 97 0.0 799
WERAM-Arl-0087 fgenesh2_kg.5__ 500__ AT3G27260.1 Arabidopsis lyrata 86 0.0 680
WERAM-Art-0078 AT3G27260.1 Arabidopsis thaliana 84 0.0 661
WERAM-Thc-0044 EOY02687 Theobroma cacao 55 9e-99 358
WERAM-Prp-0051 EMJ16706 Prunus persica 53 2e-94 343
WERAM-Viv-0092 VIT_14s0171g00380.t01 Vitis vinifera 51 1e-89 327
WERAM-Glm-0208 GLYMA16G06710.1 Glycine max 50 4e-88 323
WERAM-Pot-0013 POPTR_0001s36360.1 Populus trichocarpa 50 1e-81 301
WERAM-Sol-0051 Solyc03g111090.2.1 Solanum lycopersicum 46 2e-74 277
WERAM-Sot-0041 PGSC0003DMT400039290 Solanum tuberosum 46 3e-74 276
WERAM-Amt-0007 ERN06807 Amborella trichopoda 44 7e-68 255
WERAM-Met-0001 KEH17395 Medicago truncatula 43 2e-66 251
WERAM-Lep-0087 LPERR08G01860.1 Leersia perrieri 43 3e-62 236
WERAM-Orbr-0095 OB08G11920.1 Oryza brachyantha 43 2e-60 230
WERAM-Mua-0011 GSMUA_Achr10P16600_001 Musa acuminata 49 4e-58 223
WERAM-Orr-0091 ORUFI08G01910.1 Oryza rufipogon 40 2e-55 214
WERAM-Orni-0086 ONIVA08G01570.1 Oryza nivara 40 2e-55 214
WERAM-Ori-0092 BGIOSGA027719-PA Oryza indica 40 3e-55 213
WERAM-Tra-0339 TRAES3BF028200070CFD_t1 Triticum aestivum 39 2e-52 204
WERAM-Hov-0096 MLOC_70538.1 Hordeum vulgare 40 3e-52 203
WERAM-Tru-0075 TRIUR3_28030-P1 Triticum urartu 39 7e-52 202
WERAM-Aet-0016 EMT08210 Aegilops tauschii 39 9e-51 198
WERAM-Brd-0087 BRADI3G47960.1 Brachypodium distachyon 38 6e-50 196
WERAM-Zem-0009 GRMZM2G006707_P01 Zea mays 49 2e-49 194
WERAM-Sob-0073 Sb04g025160.1 Sorghum bicolor 48 9e-49 192
WERAM-Orm-0027 OMERI02G22640.1 Oryza meridionalis 37 5e-48 189
WERAM-Sei-0065 Si016501m Setaria italica 48 5e-48 189
WERAM-Ors-0023 OS02T0601800-01 Oryza sativa 49 2e-47 187
WERAM-Org-0025 ORGLA02G0198800.1 Oryza glaberrima 49 2e-47 187
WERAM-Orb-0025 OBART02G23090.1 Oryza barthii 49 2e-47 187
WERAM-Orl-0061 KN539183.1_FGP004 Oryza longistaminata 49 3e-47 187
WERAM-Orgl-0026 OGLUM02G23450.1 Oryza glumaepatula 49 5e-47 186
WERAM-Orp-0024 OPUNC02G21060.1 Oryza punctata 46 1e-46 185
WERAM-Sem-0092 EFJ05740 Selaginella moellendorffii 41 2e-42 171
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 42 2e-35 147
WERAM-Orn-0007 ENSONIP00000000922.1 Oreochromis niloticus 47 1e-24 112
Created Date 25-Jun-2016