WERAM Information

Tag Content
WERAM ID WERAM-Brr-0108
Ensembl Protein ID Bra020653.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra020653 Bra020653.1 Bra020653.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.40e-09 37.4 89 185
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                     C +C  d+ +   +++Cd+C+  +H+ C++++   lp g +w+Cp+C+
  Bra020653.1-P  89 ACGIC-GDGGD---LLCCDGCPSTYHQACLGIE--VLPVG-DWHCPNCT 130
                    799**.44444...9******************..*****.*******8 PP
        PHD.txt   4 ClvCg....kddeg.ekemvqCdeCddwfHlkCvklp.lsslpeg.kswyCpsCk 51 
                    C +C+     ++e+ ++ ++ C+ C + +H++C++    ++++++ +s++ p+C 
  Bra020653.1-P 131 CKFCDavvhSVGEDqNPSLLSCNMCGRKYHQSCMSEVeAHNVQSSaSSFCGPKCS 185
                    888964544222222444****************876244444444568778886 PP
Protein Sequence
(Fasta)		MNHQCTKVML EGWVTRAGIH CACCSKILTI SRFEIHAGSK SCQPFQNIYL ESGSSLLHCQ 60
IRAWNMQKDA KNLGFHHVDA DGDDPHDDAC GICGDGGDLL CCDGCPSTYH QACLGIEVLP 120
VGDWHCPNCT CKFCDAVVHS VGEDQNPSLL SCNMCGRKYH QSCMSEVEAH NVQSSASSFC 180
GPKCSELFEK LKKYLGVKHE IEGGYSWSLI HRVDTDSKFN SQLSAQRIEN NSKLAVGLAI 240
MDECFLPIID RRSGINLIRN VLYNCGSNFS RINYTGFYTA ILERGDEIIC AASLRFHGMQ 300
LAEMPFIGTR HIYRRQGMCR RLFDAIESAM RSLKVEKLVI PAIPDFLHAW TGNFGFSPLD 360
DSVRKEMRSL NTLVFPGIDM LHKPLLHEEK KSKFAAVGDC VVVHKDAMGS EVETEKKSES 420
ASFAETCLNS NGHVADDDAD CDKKTLVSDE KTSPICTPVE ATMDTVSKPE GGESRRYIPG 480
EESGISVSSC QFTLKSCSKQ RDDTGSSCED VNVEAVAKLL SLEFVQASTE VQIENNLSSS 540
TSGLGSSDIS SITQEGKTEQ NSPNREATPS CKDSDRLGPG AKLAVSKADG LLL 593
Nucleotide Sequence
(Fasta)		ATGAACCATC AATGTACAAA GGTGATGCTG GAGGGATGGG TAACAAGAGC GGGGATTCAT 60
TGCGCCTGCT GCAGTAAAAT CCTCACAATC TCCAGGTTTG AGATCCATGC CGGGAGCAAG 120
TCATGTCAGC CTTTCCAAAA TATATACCTG GAATCTGGCA GTTCTCTTCT TCATTGCCAA 180
ATCAGAGCGT GGAATATGCA GAAAGATGCT AAGAATCTTG GTTTTCATCA CGTGGACGCC 240
GACGGTGATG ATCCACATGA TGATGCTTGT GGTATCTGTG GCGATGGTGG AGATTTGCTT 300
TGCTGTGATG GTTGTCCATC AACATACCAT CAAGCCTGCC TAGGTATTGA GGTGCTTCCG 360
GTGGGTGACT GGCACTGTCC AAATTGCACT TGCAAATTTT GTGATGCTGT GGTGCATTCT 420
GTTGGCGAAG ACCAAAATCC TTCATTGCTT TCCTGCAACA TGTGTGGGAG AAAATATCAC 480
CAATCATGCA TGAGTGAGGT GGAAGCTCAT AATGTTCAAT CTTCAGCTTC TTCGTTTTGT 540
GGACCTAAGT GCTCAGAGCT CTTCGAAAAG CTGAAGAAGT ATCTTGGCGT CAAACATGAA 600
ATTGAAGGTG GCTACTCATG GTCTCTTATA CATAGGGTGG ACACGGATTC AAAATTCAAC 660
TCTCAGTTGT CGGCACAAAG GATTGAAAAC AATTCAAAAC TAGCTGTCGG GCTGGCGATC 720
ATGGATGAGT GTTTTTTGCC CATAATTGAC AGGCGGAGTG GGATCAATCT AATTCGCAAT 780
GTCCTTTATA ACTGTGGATC CAATTTCAGC CGGATTAATT ATACTGGCTT CTACACTGCT 840
ATCCTAGAGA GAGGAGATGA AATCATATGT GCAGCATCTC TCAGGTTCCA TGGTATGCAA 900
TTGGCGGAGA TGCCATTCAT TGGAACCAGG CATATATACA GGCGTCAAGG AATGTGTCGT 960
CGGCTTTTTG ATGCCATTGA GTCGGCTATG CGTTCTCTCA AGGTTGAGAA ATTGGTAATC 1020
CCTGCCATTC CAGACTTTTT GCACGCCTGG ACCGGTAACT TCGGATTCAG CCCTCTTGAT 1080
GATTCAGTTA GGAAAGAGAT GAGGTCCCTC AACACGTTGG TGTTTCCTGG AATAGACATG 1140
TTACACAAAC CTCTCCTCCA TGAAGAAAAG AAGTCCAAAT TCGCAGCTGT AGGTGACTGT 1200
GTCGTTGTAC ATAAGGATGC CATGGGTTCA GAGGTAGAGA CAGAGAAGAA ATCTGAATCT 1260
GCGTCTTTTG CTGAAACTTG TCTAAACTCC AATGGACATG TCGCTGATGA TGATGCAGAC 1320
TGCGACAAGA AGACTCTCGT TTCTGATGAG AAAACCAGTC CTATATGTAC ACCAGTTGAA 1380
GCAACCATGG ACACGGTTTC CAAGCCGGAG GGTGGTGAAT CGAGGAGATA TATACCTGGT 1440
GAAGAATCTG GGATTAGCGT TTCTTCTTGT CAGTTCACGT TGAAGTCTTG CTCTAAGCAA 1500
CGTGACGATA CAGGATCATC ATGCGAAGAT GTGAATGTAG AAGCTGTTGC TAAGTTACTA 1560
TCTCTGGAAT TCGTACAAGC ATCCACTGAG GTTCAGATTG AAAACAATCT CTCCTCATCT 1620
ACTTCCGGTT TAGGATCATC AGATATAAGC TCTATCACTC AAGAAGGCAA GACTGAACAA 1680
AACTCACCGA ACAGAGAGGC CACTCCTTCA TGTAAAGACA GTGACAGACT CGGTCCTGGT 1740
GCTAAGTTGG CTGTATCGAA AGCAGATGGT TTACTTTTGT GA 1783
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0088 Bo5g005570.1 Brassica oleracea 96 0.0 1045
WERAM-Prp-0110 EMJ25684 Prunus persica 67 2e-147 520
WERAM-Thc-0054 EOY05682 Theobroma cacao 68 9e-145 511
WERAM-Glm-0010 GLYMA01G44870.1 Glycine max 68 2e-142 503
WERAM-Viv-0024 VIT_05s0020g03420.t01 Vitis vinifera 66 5e-141 498
WERAM-Art-0101 AT4G14920.1 Arabidopsis thaliana 63 3e-136 483
WERAM-Met-0033 KEH43887 Medicago truncatula 64 4e-136 482
WERAM-Sol-0114 Solyc09g076010.2.1 Solanum lycopersicum 61 1e-132 471
WERAM-Mua-0076 GSMUA_Achr4P21300_001 Musa acuminata 60 3e-122 436
WERAM-Orgl-0070 OGLUM07G04140.1 Oryza glumaepatula 50 4e-107 386
WERAM-Orr-0074 ORUFI07G04440.1 Oryza rufipogon 50 1e-106 384
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 50 1e-106 384
WERAM-Org-0072 ORGLA07G0040300.1 Oryza glaberrima 50 1e-106 384
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 50 2e-106 384
WERAM-Orm-0068 OMERI07G03260.1 Oryza meridionalis 50 4e-106 383
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 46 8e-106 382
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 50 8e-106 382
WERAM-Orbr-0080 OB07G13580.1 Oryza brachyantha 47 8e-105 378
WERAM-Tra-0234 Traes_5DL_9FA4818AF.2 Triticum aestivum 52 2e-104 377
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 49 1e-103 374
WERAM-Sei-0098 Si028686m Setaria italica 48 1e-101 368
WERAM-Tru-0097 TRIUR3_33650-P1 Triticum urartu 48 5e-100 362
WERAM-Aet-0042 EMT29012 Aegilops tauschii 48 1e-99 361
WERAM-Sob-0017 Sb02g004100.1 Sorghum bicolor 41 4e-96 349
WERAM-Amt-0036 ERN16161 Amborella trichopoda 50 2e-94 344
WERAM-Pot-0115 POPTR_0010s09810.1 Populus trichocarpa 66 2e-90 331
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 44 3e-82 303
WERAM-Zem-0135 GRMZM2G412492_P01 Zea mays 47 7e-82 302
WERAM-Hov-0086 MLOC_65889.1 Hordeum vulgare 43 1e-80 298
WERAM-Orb-0048 OBART04G30730.1 Oryza barthii 42 2e-77 287
WERAM-Arl-0059 fgenesh2_kg.3__ 1623__ AT3G14980.1 Arabidopsis lyrata 43 8e-76 282
WERAM-Sem-0141 EFJ30219 Selaginella moellendorffii 43 3e-75 280
WERAM-Sot-0081 PGSC0003DMT400067527 Solanum tuberosum 38 2e-73 274
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 45 1e-71 268
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 45 2e-55 214
Created Date 25-Jun-2016