WERAM Information

Tag Content
WERAM ID WERAM-Brr-0095
Ensembl Protein ID Bra018567.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra018567 Bra018567.1 Bra018567.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 2.60e-07 31.8 35 480
Organism Brassica rapa
Domain Profile
  Me_Reader Tudor
      Tudor.txt  5 GlrVvakwssdG...yfYsgkiVv 25
                   G  V+   +++G   +++ gk+V 
  Bra018567.1-P 35 GVAVEISTNEEGfrgAWFMGKVVT 58
                   556666666666777*******74 PP
      Tudor.txt   5 GlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkw 47 
                    G++V+a ++    +++g++    ++v+ g+   s+ + +  ++
  Bra018567.1-P 113 GEDVDAFYK--DVWWEGTV----TEVRGGDGKLSVYFRGSQEL 149
                    99******9..99******....******99999999998775 PP
      Tudor.txt  13 ssdG...yfYsgkiVvkghrvesgeeyysikyedqrkwyil 50 
                     ++G   +++ +k+V   +r   g+  y ++y d r+++++
  Bra018567.1-P 223 DEEGfvgCWFAAKVV---ER--IGDDEYRVEYKDLREVNGV 258
                    4455666*******8...44..79999*******9999876 PP
      Tudor.txt   2 skvGlrVvakwssdGyfYsgki..............................................Vvkghrve 31 
                    + vG++++a ++    ++ g++                                              V + ++v+
  Bra018567.1-P 282 FAVGDKIDAFYN--DGWWVGEViesmkdgsvgiffresaekmrfgrhglrlhkdwvngnwelplkrgeVKRAKKVP 355
                    679*********..66******777777777777777777777777777777777777777776666644444444 PP
      Tudor.txt   7 rVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkw 47 
                    +V a ++    ++ g +     ++  +++ y++ +   ++ 
  Bra018567.1-P 447 KVNALYN--DGWWIGVV-----KKVLAKSSYLVHFSKTDEM 480
                    5777777..669***99.....6666777888888776665 PP
Protein Sequence
(Fasta)		MSSLRRQSPM VTYPTNQRKK APSNNNRLPS FLKPGVAVEI STNEEGFRGA WFMGKVVTVP 60
SPDKDPLNCQ VEYATISELD GSKPLKEFVH VDHLRPALPP MSEMEKKRDI LAGEDVDAFY 120
KDVWWEGTVT EVRGGDGKLS VYFRGSQELI QFRRDELRFH REWINDTWQP PLDEAVEEEE 180
ESEEDEVDDY TEEYLVPQVN LETTKAVAKE MFSIGTVVEV SSDEEGFVGC WFAAKVVERI 240
GDDEYRVEYK DLREVNGVEP LKEVADFLHI RPPPPSDEDI DFAVGDKIDA FYNDGWWVGE 300
VIESMKDGSV GIFFRESAEK MRFGRHGLRL HKDWVNGNWE LPLKRGEVKR AKKVPFERNV 360
RRKIAIDKQY FSIGTPVEVS SIEEGFEDSW FLAKLIEYRG TDKCLVEYDK LKAEDGKEPL 420
SEEVNEFQIR PQPPEMVMVN PFEKLDKVNA LYNDGWWIGV VKKVLAKSSY LVHFSKTDEM 480
LKFHHSQLRL HQDWSDGKWI TSSKVCF 507
Nucleotide Sequence
(Fasta)		ATGTCTTCGC TGCGTCGCCA ATCTCCTATG GTAACGTATC CAACGAACCA GAGGAAGAAA 60
GCTCCTTCCA ACAATAACCG TCTCCCTTCT TTCCTAAAAC CCGGCGTCGC TGTGGAGATC 120
AGCACCAACG AGGAAGGTTT CCGCGGAGCG TGGTTCATGG GGAAGGTGGT CACAGTCCCA 180
TCTCCAGATA AGGATCCCCT CAACTGCCAG GTGGAGTACG CGACGATCTC TGAGTTAGAC 240
GGGAGTAAAC CGCTCAAGGA GTTCGTCCAC GTGGATCATC TTCGTCCTGC GCTTCCGCCG 300
ATGTCTGAGA TGGAGAAGAA GAGAGATATC TTGGCTGGAG AAGATGTCGA CGCGTTTTAC 360
AAAGACGTTT GGTGGGAAGG GACTGTTACT GAGGTTCGCG GTGGTGATGG GAAGCTCAGT 420
GTTTACTTCA GAGGCTCCCA GGAGCTGATT CAGTTTCGCA GAGATGAGTT AAGGTTTCAT 480
CGCGAGTGGA TTAACGACAC GTGGCAGCCT CCCCTAGATG AAGCTGTGGA GGAGGAGGAG 540
GAATCAGAGG AAGACGAAGT AGATGACTAC ACAGAAGAGT ACCTTGTACC GCAAGTGAAT 600
CTGGAAACTA CCAAAGCCGT TGCGAAAGAG ATGTTTTCCA TTGGCACAGT CGTTGAGGTT 660
AGCAGCGACG AGGAAGGTTT CGTCGGGTGT TGGTTTGCAG CGAAAGTCGT TGAACGCATT 720
GGCGATGACG AGTACCGGGT CGAGTACAAA GACTTGAGGG AAGTAAACGG CGTCGAGCCT 780
TTGAAAGAAG TAGCCGACTT TCTGCACATA CGGCCGCCGC CACCGAGTGA CGAGGATATA 840
GACTTTGCTG TTGGGGACAA GATTGACGCT TTTTACAACG ACGGGTGGTG GGTGGGTGAG 900
GTTATAGAGA GTATGAAGGA TGGAAGTGTT GGTATCTTTT TCAGGGAGTC GGCAGAGAAG 960
ATGCGGTTTG GAAGGCATGG TCTTCGTCTG CATAAGGACT GGGTTAACGG GAACTGGGAG 1020
CTGCCGTTGA AAAGAGGAGA GGTGAAGAGA GCAAAGAAAG TTCCATTTGA ACGGAACGTG 1080
AGACGTAAAA TAGCAATCGA CAAGCAATAT TTCAGCATTG GAACTCCAGT GGAAGTTAGC 1140
AGTATTGAAG AAGGGTTTGA AGATTCTTGG TTTCTTGCGA AACTTATCGA GTACAGAGGA 1200
ACGGACAAGT GCCTTGTGGA GTATGATAAG CTGAAAGCTG AAGATGGGAA AGAGCCCTTG 1260
AGCGAAGAGG TTAATGAATT TCAGATAAGG CCTCAGCCAC CAGAGATGGT CATGGTTAAT 1320
CCGTTCGAGA AGCTTGACAA AGTTAACGCT CTGTATAATG ATGGATGGTG GATCGGGGTG 1380
GTTAAAAAGG TTCTTGCGAA GTCGAGCTAC CTGGTTCATT TCTCGAAAAC TGATGAGATG 1440
CTGAAGTTTC ATCATTCTCA ACTAAGGCTG CATCAGGATT GGAGTGATGG CAAGTGGATA 1500
ACATCTTCTA AGGTATGCTT CTAA 1525
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0049 fgenesh2_kg.1__ 977__ AT1G09320.1 Arabidopsis lyrata 69 0.0 697
WERAM-Art-0008 AT1G09320.1 Arabidopsis thaliana 69 0.0 678
WERAM-Bro-0003 Bo01087s020.1 Brassica oleracea 69 0.0 676
WERAM-Pot-0056 POPTR_0005s01460.1 Populus trichocarpa 39 2e-63 241
WERAM-Sot-0045 PGSC0003DMT400041247 Solanum tuberosum 37 4e-57 219
WERAM-Thc-0070 EOY11696 Theobroma cacao 35 9e-55 212
WERAM-Prp-0125 EMJ22805 Prunus persica 36 2e-47 187
WERAM-Amt-0093 ERN04860 Amborella trichopoda 30 1e-09 62.4
WERAM-Sol-0109 Solyc09g031580.2.1 Solanum lycopersicum 33 5e-09 60.1
WERAM-Met-0088 KEH34313 Medicago truncatula 30 5e-09 60.1
WERAM-Glm-0132 GLYMA11G27510.1 Glycine max 32 8e-09 59.3
Created Date 25-Jun-2016