WERAM Information

Tag Content
WERAM ID WERAM-Brr-0087
Ensembl Protein ID Bra016893.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra016893 Bra016893.1 Bra016893.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.30e-11 43.7 249 316
Organism Brassica rapa
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   3 hevsepFrepvdpqleipdYydiikePmdLstikerleegnYss.peefvkDvrlifnNakaynenkss 70 
                    h++   F+++ +  +e p+Y +ii++++d++ i++  eeg Y+s ++++ +D+ l++nNak ++ ++ss
  Bra016893.1-P 249 HPCGYLFSRRLET-QETPEYGKIIRQHVDFEMIRKLDEEGLYKSsMTKLFRDLLLLINNAKVFYHKGSS 316
                    788889999****.8****************************99*******************99886 PP
Protein Sequence
(Fasta)		MAKPENDDVS PEKQTWGTWE ELLLACAVHR HGTESWPSVS AEIQKRTRNL SSLTASACRH 60
KYSDLKRRFT QEMTSPESEI SSVPWLEKLR RIRVDELRRE VERYDLSISS LRSKVKRLEE 120
ETSSHLDKKE LRRESDRDGG ELVPISPDPV DISSEMAGAV DGGGEAKLTE DDSCRGSCEK 180
ESGVNSERRI RLTESMAESE GGVNRGEEEG KETSDVQSSA SLPRKGTSEV DNEDRSQPSI 240
SFVEMLLSHP CGYLFSRRLE TQETPEYGKI IRQHVDFEMI RKLDEEGLYK SSMTKLFRDL 300
LLLINNAKVF YHKGSSEFNS AEQLHQLVKK QMATTLQREL PPPKEKSLEL VSFKEAVAVT 360
SKPRISLPIV ACGKRSSLAS KPLLMISPSG GDKKGKKTDQ VVDDEKLVLL KDEETSGKDD 420
ESLVLRKMVR GKTSTAKKVV TRNVKNSGSS LNEVKTTDEE KKGNQSGSSK RKSVANFLKR 480
MKGGGSSSDT VVETLMPSSE QKKNNIRKAD AKKRATGENK TNEKASPVKK KNNGRALKGE 540
AAPSSSSPVV AKRSRESGEK KEASSSSPSS TRSKKRARRL SCPNSYPHMH FESTTTHSNS 600
CV 602
Nucleotide Sequence
(Fasta)		ATGGCTAAGC CCGAAAACGA CGACGTCTCT CCCGAGAAAC AAACATGGGG AACATGGGAA 60
GAGCTTCTCC TCGCCTGCGC CGTGCACCGC CACGGCACCG AATCGTGGCC CTCCGTATCC 120
GCCGAAATCC AGAAACGGAC TCGCAACCTC TCCTCCCTCA CCGCCTCCGC TTGCCGCCAC 180
AAGTACTCCG ACCTCAAACG ACGGTTCACT CAAGAAATGA CTTCACCGGA ATCAGAGATC 240
TCATCCGTCC CTTGGCTGGA GAAGCTGAGG AGGATCCGAG TAGACGAGCT CCGTCGCGAA 300
GTCGAGCGAT ACGATCTATC CATCTCGTCG TTGCGATCGA AGGTGAAGAG ATTAGAAGAA 360
GAGACGAGCT CGCATCTAGA TAAGAAAGAG CTCCGCCGCG AATCGGATCG AGACGGCGGC 420
GAACTGGTCC CGATTTCGCC GGATCCGGTA GATATTAGCT CGGAGATGGC CGGAGCCGTC 480
GACGGAGGAG GAGAAGCGAA GCTGACCGAA GATGATTCGT GTAGAGGGAG CTGCGAGAAG 540
GAATCGGGAG TTAACTCGGA GCGAAGGATC AGGTTAACTG AGTCGATGGC CGAGTCGGAG 600
GGAGGAGTGA ATCGTGGAGA GGAGGAGGGG AAGGAGACGA GCGATGTGCA GAGCTCGGCG 660
AGCTTGCCGA GGAAGGGAAC GTCGGAAGTG GATAATGAGG ATCGATCTCA GCCGTCGATT 720
AGTTTCGTCG AGATGCTTTT GTCGCACCCG TGTGGCTACC TCTTTTCGCG CCGACTCGAA 780
ACCCAGGAAA CACCAGAGTA CGGTAAGATT ATCAGACAGC ATGTAGATTT TGAGATGATT 840
AGGAAACTTG ACGAAGAAGG ATTGTACAAA AGTTCGATGA CCAAATTGTT CCGTGATTTG 900
CTTCTACTTA TCAACAACGC CAAAGTTTTT TATCACAAGG GCTCTTCTGA GTTCAACTCT 960
GCAGAGCAGC TTCACCAACT CGTCAAGAAA CAGATGGCTA CTACTCTACA GAGAGAGTTA 1020
CCACCACCGA AAGAGAAGTC CTTGGAGTTA GTTTCGTTTA AAGAGGCTGT TGCAGTCACT 1080
TCAAAGCCGA GAATCTCTCT CCCTATTGTA GCTTGTGGGA AACGAAGCTC CTTGGCTTCT 1140
AAACCTTTGC TTATGATATC ACCCTCTGGA GGTGACAAGA AAGGGAAGAA GACAGATCAA 1200
GTGGTTGATG ATGAGAAGCT TGTTTTATTG AAGGATGAAG AAACCTCTGG GAAAGATGAC 1260
GAGTCTCTGG TTTTGAGGAA GATGGTGAGA GGAAAAACCT CTACGGCTAA AAAAGTAGTA 1320
ACCAGGAACG TCAAGAACAG TGGTTCCAGC TTGAATGAGG TTAAGACAAC TGATGAAGAG 1380
AAGAAGGGTA ACCAAAGTGG TAGCTCGAAA AGGAAAAGCG TTGCGAATTT TCTCAAGAGA 1440
ATGAAAGGTG GTGGTTCTTC GTCTGATACA GTGGTCGAGA CATTGATGCC AAGCTCTGAA 1500
CAGAAGAAGA ACAACATCCG CAAAGCTGAT GCTAAGAAAC GAGCAACAGG GGAGAACAAA 1560
ACAAATGAAA AAGCAAGTCC TGTGAAGAAG AAAAACAATG GTCGAGCCCT CAAAGGAGAG 1620
GCTGCTCCAT CTTCTTCTTC ACCTGTTGTT GCTAAGCGAA GTAGGGAATC TGGTGAGAAG 1680
AAGGAAGCTT CTTCTTCTTC TCCTTCTTCT ACACGGTCGA AGAAACGTGC AAGGAGGTTG 1740
AGCTGTCCTA ATTCTTATCC ACACATGCAC TTCGAGAGCA CCACTACTCA CAGTAACAGC 1800
TGTGTGTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0056 AT2G42150.1 Arabidopsis thaliana 58 9e-156 547
WERAM-Bro-0086 Bo4g191330.1 Brassica oleracea 72 5e-124 442
WERAM-Arl-0012 Al_scaffold_0005_2712 Arabidopsis lyrata 49 7e-118 422
WERAM-Thc-0062 EOY09477 Theobroma cacao 38 2e-89 327
WERAM-Prp-0113 EMJ03206 Prunus persica 34 2e-68 258
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 34 2e-60 231
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 37 3e-59 227
WERAM-Sol-0008 Solyc01g073950.2.1 Solanum lycopersicum 33 1e-49 195
WERAM-Pot-0008 POPTR_0001s23640.1 Populus trichocarpa 33 8e-43 172
WERAM-Zem-0018 GRMZM2G022499_P01 Zea mays 31 2e-41 167
WERAM-Glm-0090 GLYMA08G15870.1 Glycine max 29 9e-39 159
WERAM-Brd-0083 BRADI3G40060.1 Brachypodium distachyon 35 2e-38 157
WERAM-Sei-0046 Si013408m Setaria italica 27 3e-29 127
WERAM-Hov-0108 MLOC_75616.3 Hordeum vulgare 33 4e-29 127
WERAM-Met-0045 AES66032 Medicago truncatula 46 2e-25 115
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 50 2e-25 114
WERAM-Amt-0004 ERN03421 Amborella trichopoda 32 3e-25 114
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 48 1e-24 112
WERAM-Orni-0095 ONIVA08G22660.1 Oryza nivara 48 1e-24 112
WERAM-Ors-0085 OS08T0510700-01 Oryza sativa 48 2e-24 112
WERAM-Orr-0099 ORUFI08G22500.1 Oryza rufipogon 48 2e-24 112
WERAM-Ori-0091 BGIOSGA026697-PA Oryza indica 48 2e-24 112
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 48 2e-24 111
WERAM-Tru-0078 TRIUR3_28812-P1 Triticum urartu 34 3e-20 97.4
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 49 5e-20 96.7
WERAM-Sot-0018 PGSC0003DMT400016153 Solanum tuberosum 33 2e-18 91.7
WERAM-Aet-0108 EMT21081 Aegilops tauschii 37 1e-17 89.0
WERAM-Sob-0110 Sb07g027680.1 Sorghum bicolor 36 7e-17 86.7
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 34 1e-16 85.5
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 41 2e-15 82.0
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 41 6e-14 76.6
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 38 7e-14 76.6
Created Date 25-Jun-2016