Tag |
Content |
WERAM ID |
WERAM-Brr-0080 |
Ensembl Protein ID |
Bra015723.1-P |
Gene Name |
SDG26 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HMT |
SET2 |
5.60e-50 |
169.4 |
90 |
206 |
HMT |
SET1 |
1.00e-32 |
113.7 |
93 |
206 |
|
Organism |
Brassica rapa |
Domain Profile |
HMT SET2
SET2.txt 2 kveliktekkGyGlrakeeikkdefileYvGevidekeakkRlkeyeeekvkdfYlleldkdeviDatkkGnlaRfinhsCePncetqkwtvegel 97 k++lik+e +GyGl+a e+ik+++fi+eY+Gevi++keak+R+++ye+++vkd+Y+++l+++e+iDatkkG+laRfinhsC+Pncet+kw+v ge+ Bra015723.1-P 90 KTKLIKSEGRGYGLVAVEDIKEGQFIIEYCGEVISWKEAKRRAQTYETHGVKDAYIISLNASEAIDATKKGSLARFINHSCKPNCETRKWNVLGEV 185 789********************************************************************************************* PP SET2.txt 98 rvglfakkkikkgeeltfdYn 118 rvg+fak++i+ ++el++dYn Bra015723.1-P 186 RVGIFAKESISPRTELAYDYN 206 ********************8 PP
HMT SET1
SET1.txt 5 vakskikglglvakkeiekeelviEYvGevirsevadkrekeyekkeig.vylfrldedaevvvdatkkgniarfinhscepNceakvvavdgekk 99 + ks+ +g+glva ++i++++++iEY+Gevi+ ++a++r ++ye+++++ y+ +l+ + +datkkg+ arfinhsc+pNce++ +v ge + Bra015723.1-P 93 LIKSEGRGYGLVAVEDIKEGQFIIEYCGEVISWKEAKRRAQTYETHGVKdAYIISLNAS--EAIDATKKGSLARFINHSCKPNCETRKWNVLGEVR 186 6788899******************************************9*********..99********************************* PP SET1.txt 100 iviyakraIekgeeltydYk 119 ++i+ak +I+ +el ydY+ Bra015723.1-P 187 VGIFAKESISPRTELAYDYN 206 *******************7 PP
|
Protein Sequence (Fasta) | MQFSCDPDQE GDEVPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN 60 VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKSEGRG YGLVAVEDIK EGQFIIEYCG 120 EVISWKEAKR RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC KPNCETRKWN 180 VLGEVRVGIF AKESISPRTE LAYDYNFEWY GGTKVRCLCG AVSCSGFLGA KSRGFQEDTY 240 VWEDGDDRYS VDKIPVYDSA EDELTSEPTS KNVESNTNEE KDIVKEESTG MIVEQSDSAP 300 MEVDAVTETV KTEAAEEDSS QKTAVISKSL PRKRGRPITK NVVKKHVDIA NVVQLLATKE 360 AQDEVLKCEE VKKEAAVRLM SLYDEIRPAI EEHERDSQDS VATSVAEKWI QASCYKLKAE 420 FDLYSCVIKN IACTPIKPRD STKIKAAEAG SDNNQTKLSE S 461Protein Fasta Sequence
>Bra015723.1-P|SET1|Brassica rapa MQFSCDPDQEGDEVPQYEHIYQNDFSYRKHKKQKEEDISICECKFDFGDPDSACGERCLNVITNTECTPGYCPCGVYCKNQKFQKCEYAKTKLIKSEGRGYGLVAVEDIKEGQFIIEYCGEVISWKEAKRRAQTYETHGVKDAYIISLNASEAIDATKKGSLARFINHSCKPNCETRKWNVLGEVRVGIFAKESISPRTELAYDYNFEWYGGTKVRCLCGAVSCSGFLGAKSRGFQEDTYVWEDGDDRYSVDKIPVYDSAEDELTSEPTSKNVESNTNEEKDIVKEESTGMIVEQSDSAPMEVDAVTETVKTEAAEEDSSQKTAVISKSLPRKRGRPITKNVVKKHVDIANVVQLLATKEAQDEVLKCEEVKKEAAVRLMSLYDEIRPAIEEHERDSQDSVATSVAEKWIQASCYKLKAEFDLYSCVIKNIACTPIKPRDSTKIKAAEAGSDNNQTKLSES
|
Nucleotide Sequence (Fasta) | ATGCAATTTT CTTGTGATCC TGATCAAGAG GGAGACGAGG TGCCACAGTA TGAACACATC 60 TATCAAAATG ACTTCTCTTA TCGAAAGCAC AAGAAACAGA AGGAAGAAGA TATCTCTATC 120 TGTGAATGCA AGTTTGATTT TGGAGACCCT GACAGTGCTT GTGGTGAGAG ATGCCTCAAT 180 GTGATTACCA ATACCGAGTG TACACCTGGT TACTGCCCTT GTGGTGTCTA TTGCAAGAAT 240 CAGAAGTTTC AGAAATGTGA ATACGCAAAG ACGAAGTTGA TTAAGTCTGA AGGTCGTGGT 300 TATGGACTAG TGGCTGTTGA AGACATAAAG GAAGGACAGT TCATTATTGA GTACTGTGGA 360 GAAGTGATCT CATGGAAAGA AGCAAAGCGT AGAGCTCAAA CTTACGAAAC TCATGGTGTA 420 AAGGATGCTT ACATAATATC TCTCAATGCG TCTGAGGCTA TTGACGCTAC TAAGAAAGGA 480 AGCCTTGCTA GGTTTATAAA TCATTCATGT AAACCAAACT GTGAGACGAG GAAGTGGAAT 540 GTTTTGGGAG AAGTCAGAGT TGGGATCTTT GCCAAAGAGA GCATATCTCC AAGGACTGAG 600 TTGGCTTATG ACTATAACTT TGAGTGGTAC GGTGGAACCA AAGTCCGTTG TCTCTGCGGT 660 GCAGTGTCTT GCTCTGGCTT TCTTGGAGCC AAGTCTCGTG GCTTTCAGGA GGATACATAT 720 GTATGGGAGG ACGGTGATGA TCGGTACTCA GTTGATAAGA TTCCAGTCTA TGATTCTGCA 780 GAAGACGAGC TTACATCTGA GCCTACTTCT AAGAATGTTG AGTCCAACAC AAATGAAGAG 840 AAAGATATTG TGAAAGAGGA GTCTACTGGT ATGATTGTTG AGCAATCAGA TTCAGCTCCT 900 ATGGAGGTAG ATGCTGTCAC AGAAACTGTT AAAACCGAAG CAGCTGAAGA AGATTCATCA 960 CAGAAGACAG CAGTTATATC TAAGTCTCTT CCGAGGAAAA GAGGAAGGCC GATTACAAAG 1020 AATGTGGTGA AGAAGCACGT TGACATAGCA AACGTGGTTC AGCTACTAGC AACCAAAGAA 1080 GCTCAAGATG AAGTTCTCAA ATGCGAGGAG GTGAAGAAGG AAGCAGCGGT ACGTCTCATG 1140 TCCTTGTACG ATGAGATAAG ACCAGCGATT GAAGAGCACG AGAGAGATAG CCAAGACAGT 1200 GTAGCGACAA GCGTGGCTGA GAAGTGGATA CAAGCAAGCT GTTATAAGCT CAAGGCGGAG 1260 TTTGATCTTT ACTCTTGTGT GATAAAGAAC ATCGCTTGCA CTCCTATCAA ACCACGTGAC 1320 TCGACGAAGA TTAAGGCTGC AGAAGCAGGA AGTGATAATA ACCAGACTAA GCTCTCTGAA 1380 AGCTGA
1387Nucleotide Fasta Sequence
>Bra015723.1-P|SET1|Brassica rapa ATGCAATTTTCTTGTGATCCTGATCAAGAGGGAGACGAGGTGCCACAGTATGAACACATCTATCAAAATGACTTCTCTTATCGAAAGCACAAGAAACAGAAGGAAGAAGATATCTCTATCTGTGAATGCAAGTTTGATTTTGGAGACCCTGACAGTGCTTGTGGTGAGAGATGCCTCAATGTGATTACCAATACCGAGTGTACACCTGGTTACTGCCCTTGTGGTGTCTATTGCAAGAATCAGAAGTTTCAGAAATGTGAATACGCAAAGACGAAGTTGATTAAGTCTGAAGGTCGTGGTTATGGACTAGTGGCTGTTGAAGACATAAAGGAAGGACAGTTCATTATTGAGTACTGTGGAGAAGTGATCTCATGGAAAGAAGCAAAGCGTAGAGCTCAAACTTACGAAACTCATGGTGTAAAGGATGCTTACATAATATCTCTCAATGCGTCTGAGGCTATTGACGCTACTAAGAAAGGAAGCCTTGCTAGGTTTATAAATCATTCATGTAAACCAAACTGTGAGACGAGGAAGTGGAATGTTTTGGGAGAAGTCAGAGTTGGGATCTTTGCCAAAGAGAGCATATCTCCAAGGACTGAGTTGGCTTATGACTATAACTTTGAGTGGTACGGTGGAACCAAAGTCCGTTGTCTCTGCGGTGCAGTGTCTTGCTCTGGCTTTCTTGGAGCCAAGTCTCGTGGCTTTCAGGAGGATACATATGTATGGGAGGACGGTGATGATCGGTACTCAGTTGATAAGATTCCAGTCTATGATTCTGCAGAAGACGAGCTTACATCTGAGCCTACTTCTAAGAATGTTGAGTCCAACACAAATGAAGAGAAAGATATTGTGAAAGAGGAGTCTACTGGTATGATTGTTGAGCAATCAGATTCAGCTCCTATGGAGGTAGATGCTGTCACAGAAACTGTTAAAACCGAAGCAGCTGAAGAAGATTCATCACAGAAGACAGCAGTTATATCTAAGTCTCTTCCGAGGAAAAGAGGAAGGCCGATTACAAAGAATGTGGTGAAGAAGCACGTTGACATAGCAAACGTGGTTCAGCTACTAGCAACCAAAGAAGCTCAAGATGAAGTTCTCAAATGCGAGGAGGTGAAGAAGGAAGCAGCGGTACGTCTCATGTCCTTGTACGATGAGATAAGACCAGCGATTGAAGAGCACGAGAGAGATAGCCAAGACAGTGTAGCGACAAGCGTGGCTGAGAAGTGGATACAAGCAAGCTGTTATAAGCTCAAGGCGGAGTTTGATCTTTACTCTTGTGTGATAAAGAACATCGCTTGCACTCCTATCAAACCACGTGACTCGACGAAGATTAAGGCTGCAGAAGCAGGAAGTGATAATAACCAGACTAAGCTCTCTGAAAGCTGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |