WERAM Information

Tag Content
WERAM ID WERAM-Brr-0046
Ensembl Protein ID Bra009403.1-P
Gene Name ATXR5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra009403 Bra009403.1 Bra009403.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT SET1 3.20e-30 105.6 122 243
Organism Brassica rapa
Domain Profile
  HMT SET1
       SET1.txt   2 elevakskikglglvakkeiekeelviEYvGevirsevadkrekeyekkeigvylfrldedaevvvdatkkgniarfi....nhsce....pNcea 89 
                    +l v++++++g++++a+ +i++ ++++EY+G+v   ++ ++re++ ++++i+++l + d+++++v++++k gni+rfi    nh+      +Nc++
  Bra009403.1-P 122 PLVVVFDPLEGYTVEADGPIKDLTFIAEYTGDV---DYLKNREND-DCDSIMTLLLSEDPSKTLVICPDKYGNISRFIsginNHNRFgkkkQNCKC 213
                    68999****************************...********9.999*****************************9999887656677***** PP
       SET1.txt  90 kvvavdgekkiviyakraIekgeeltydYk 119
                     +++v+ge++++++a+r+I+kge+l+ydY+
  Bra009403.1-P 214 VRYSVNGECRVLLVATRDIAKGERLYYDYN 243
                    *****************************7 PP
Protein Sequence
(Fasta)		MHFFRIEKQI DQTEKSQLSQ EESRKHRRRS CSLTVKKRRR KLLPMVPSED LEQRLAQMGT 60
LASALTALGI KYSDDLTYVP GMAPRSANRS KFEIGGMQVL AKEDLETLEL CRAMYRRGEC 120
PPLVVVFDPL EGYTVEADGP IKDLTFIAEY TGDVDYLKNR ENDDCDSIMT LLLSEDPSKT 180
LVICPDKYGN ISRFISGINN HNRFGKKKQN CKCVRYSVNG ECRVLLVATR DIAKGERLYY 240
DYNGYEHEYP THLFL 255
Nucleotide Sequence
(Fasta)		ATGCATTTCT TTCGGATCGA AAAGCAAATT GATCAAACGG AGAAATCACA GCTGAGTCAA 60
GAAGAGAGTA GAAAGCACCG GAGACGATCT TGCTCCTTGA CAGTGAAGAA GAGGAGGAGA 120
AAGCTATTAC CTATGGTTCC ATCTGAAGAT CTTGAACAGA GGCTTGCACA AATGGGCACA 180
CTTGCGTCTG CTTTAACAGC ATTGGGTATC AAATACAGCG ACGACTTGAC TTATGTTCCA 240
GGAATGGCTC CTCGGTCTGC TAATCGATCC AAGTTCGAGA TAGGTGGGAT GCAGGTGCTT 300
GCGAAAGAAG ATTTGGAGAC ATTGGAGCTA TGTAGAGCTA TGTATAGACG AGGAGAGTGT 360
CCTCCTCTTG TTGTGGTATT CGATCCACTT GAAGGTTACA CAGTTGAAGC AGATGGTCCA 420
ATTAAGGACT TAACATTCAT AGCTGAATAT ACAGGGGACG TTGATTACTT AAAGAACCGT 480
GAAAACGACG ATTGTGACAG CATCATGACT CTCCTTCTGT CTGAAGATCC ATCGAAAACT 540
CTTGTTATCT GTCCTGACAA GTATGGAAAC ATATCTCGCT TTATCAGTGG CATCAACAAT 600
CACAATAGGT TTGGTAAGAA GAAGCAGAAC TGTAAATGCG TGAGGTACAG CGTGAATGGC 660
GAGTGTCGGG TTCTTCTAGT GGCTACGCGT GATATAGCGA AAGGGGAGAG GCTCTATTAT 720
GACTACAATG GTTATGAGCA TGAGTATCCT ACTCACCTTT TCCTCTGA 769
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0182 Bo9g173800.1 Brassica oleracea 98 9e-146 513
WERAM-Arl-0102 fgenesh2_kg.6__ 934__ AT5G09790.2 Arabidopsis lyrata 88 8e-133 469
WERAM-Art-0120 AT5G09790.2 Arabidopsis thaliana 88 8e-132 466
WERAM-Thc-0006 EOX92475 Theobroma cacao 78 7e-111 397
WERAM-Pot-0086 POPTR_0007s03790.1 Populus trichocarpa 77 4e-102 368
WERAM-Sol-0132 Solyc11g005730.1.1 Solanum lycopersicum 69 3e-101 365
WERAM-Zem-0084 GRMZM2G149587_P02 Zea mays 68 6e-99 357
WERAM-Mua-0093 GSMUA_Achr6P25240_001 Musa acuminata 65 4e-98 354
WERAM-Glm-0042 GLYMA04G39260.1 Glycine max 66 2e-97 352
WERAM-Prp-0117 EMJ20963 Prunus persica 65 4e-95 344
WERAM-Viv-0102 VIT_16s0098g01510.t01 Vitis vinifera 65 6e-95 344
WERAM-Lep-0017 LPERR01G39410.1 Leersia perrieri 64 1e-94 343
WERAM-Orp-0016 OPUNC01G43970.1 Oryza punctata 65 1e-94 343
WERAM-Sei-0011 Si001848m Setaria italica 65 2e-94 342
WERAM-Ori-0016 BGIOSGA005241-PA Oryza indica 65 3e-94 341
WERAM-Orr-0015 ORUFI01G48490.1 Oryza rufipogon 65 4e-94 341
WERAM-Orni-0015 ONIVA01G51190.1 Oryza nivara 65 4e-94 341
WERAM-Org-0015 ORGLA01G0387900.1 Oryza glaberrima 65 4e-94 341
WERAM-Orgl-0015 OGLUM01G49340.1 Oryza glumaepatula 65 4e-94 341
WERAM-Ors-0011 OS01T0965500-01 Oryza sativa 65 6e-94 340
WERAM-Orbr-0019 OB01G54220.1 Oryza brachyantha 65 9e-94 340
WERAM-Orm-0017 OMERI01G41800.1 Oryza meridionalis 65 1e-93 339
WERAM-Sob-0061 Sb03g046950.1 Sorghum bicolor 64 2e-93 338
WERAM-Orb-0015 OBART01G44970.1 Oryza barthii 65 2e-93 338
WERAM-Tra-0347 TRAES3BF082800240CFD_t1 Triticum aestivum 64 3e-93 338
WERAM-Met-0073 AES72827 Medicago truncatula 68 9e-93 337
WERAM-Tru-0048 TRIUR3_21302-P1 Triticum urartu 63 1e-92 336
WERAM-Hov-0029 MLOC_20462.1 Hordeum vulgare 64 4e-92 334
WERAM-Aet-0004 EMT03211 Aegilops tauschii 63 3e-91 332
WERAM-Brd-0061 BRADI2G61717.1 Brachypodium distachyon 62 1e-90 329
WERAM-Sot-0056 PGSC0003DMT400047656 Solanum tuberosum 62 6e-87 317
WERAM-Sem-0042 EFJ28497 Selaginella moellendorffii 59 1e-81 299
WERAM-Php-0094 PP1S403_14V6.1 Physcomitrella patens 57 8e-81 297
WERAM-Amt-0073 ERN19309 Amborella trichopoda 59 2e-64 243
WERAM-Orla-0054 ENSORLP00000006946.1 Oryzias latipes 35 1e-07 54.7
WERAM-Pof-0148 ENSPFOP00000012106.2 Poecilia formosa 35 1e-07 54.3
WERAM-Dar-0128 ENSDARP00000078549.4 Danio rerio 32 2e-07 53.5
WERAM-Xet-0165 ENSXETP00000005100.3 Xenopus tropicalis 32 6e-07 52.0
WERAM-Tar-0201 ENSTRUP00000042261.1 Takifugu rubripes 31 6e-07 51.6
WERAM-Xim-0106 ENSXMAP00000009424.1 Xiphophorus maculatus 34 7e-07 51.6
WERAM-Ten-0192 ENSTNIP00000019016.1 Tetraodon nigroviridis 31 2e-06 50.1
WERAM-Ran-0219 ENSRNOP00000065285.1 Rattus norvegicus 29 8e-06 48.1
Created Date 25-Jun-2016