WERAM Information

Tag Content
WERAM ID WERAM-Brr-0034
Ensembl Protein ID Bra006897.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra006897 Bra006897.1 Bra006897.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.00e-14 53.9 131 323
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegeke...mvqCdeCddwfHlkCvklplsslpeg....kswyCpsCke 52 
                    +C++C  ++ g++e   m+ C+ C++ +H +C+k      + +    +sw CpsC++
  Bra006897.1-P 131 TCPMCFMVEVGKSErakMISCKCCRKKYHRNCLKSW--AQHRDlfnwSSWACPSCRT 185
                    7****866666555667*****************99..33333456789******96 PP
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    +C +Cg++++ +k ++ C+ Cdd++H +C ++  +++++g  ++Cp++++
  Bra006897.1-P 185 TCEACGTSGDPKK-LMFCKRCDDAYHCDCQQPRHKTVSSG-PYLCPKHTK 232
                    7****88888877.9******************9999999.******986 PP
        PHD.txt   3 iClvCgkddegeke.......mvqCdeCdd 25 
                     C+ Cg +  g+ +       + +Cd C +
  Bra006897.1-P 232 KCYSCGSKVPGNGQslrwflgHTCCDACGR 261
                    599996544444444677788888999976 PP
        PHD.txt   2 tiClvCgkddegeke..mvqCdeCddwfHlkCvklplsslpeg.....kswyCpsCk 51 
                    ++C+vC k++ +++   mv+Cd C++w+H  C +++ ++  +       ++ C +C+
  Bra006897.1-P 267 NYCPVCLKVYRDSEAtpMVCCDYCQRWVHCLCDGISDEKYMQFqvdgnLQYKCSTCR 323
                    79****98888866677*******************33333325667788******8 PP
Protein Sequence
(Fasta)		MAFHVACPIT CRKICDCLLG FPRSLHGKEA KDLFLNEIHS LQHLLPDPWD SRVSKEGTVQ 60
IHVPKLPPSD TGVDDSVKEV AASSVSRLGR HTVVLKKAVE NHAARSASDD FEMAVNELNE 120
VDHDTDSASV TCPMCFMVEV GKSERAKMIS CKCCRKKYHR NCLKSWAQHR DLFNWSSWAC 180
PSCRTCEACG TSGDPKKLMF CKRCDDAYHC DCQQPRHKTV SSGPYLCPKH TKCYSCGSKV 240
PGNGQSLRWF LGHTCCDACG RLFGKGNYCP VCLKVYRDSE ATPMVCCDYC QRWVHCLCDG 300
ISDEKYMQFQ VDGNLQYKCS TCRGESYQVK DLEDAVQEIW KRKDIEDKEL IASLRASARV 360
VGKTGGAPVI DQPGSAERKV AEKAMVSGEE EKPLRVLRIK SSRPQDSDSE KLGKHSKEQS 420
PVKAKKLVIS IGPRKAGVTN PMSCDTSKLA SKSNGKHGKL QSEETASQEE QERSILRKSS 480
EEKRGSQSEV GTSKGEGGGD SNGGQQELQK DSRRLLKLKI KTHNPESQER EAPRIVYERS 540
KSGKGHRSKR KRASPPAEKS AFNEDEDVSL SRDDSLLDEM LDASWILKKL GKDAKGKKVQ 600
IHEAADNTWE KGVVSEVGGG GTSKLMVTLE NGKVKTVELG KQGVRFVAQK QKRTRT 656
Nucleotide Sequence
(Fasta)		ATGGCCTTTC ACGTAGCTTG TCCAATTACA TGCCGTAAAA TTTGCGACTG CTTGTTGGGG 60
TTTCCTCGGA GTCTCCATGG AAAGGAAGCC AAGGATTTGT TCCTCAACGA GATTCATTCT 120
CTTCAGCACT TGTTGCCTGA CCCGTGGGAT TCTCGAGTCT CAAAGGAAGG CACCGTTCAG 180
ATCCACGTCC CTAAGCTCCC TCCCTCCGAT ACTGGTGTGG ATGATTCGGT AAAGGAGGTT 240
GCTGCATCTT CGGTTTCGAG GCTAGGCAGA CACACGGTGG TGCTGAAGAA GGCTGTTGAG 300
AATCATGCTG CACGTTCTGC TTCTGACGAC TTTGAGATGG CGGTCAATGA GCTCAATGAA 360
GTAGATCATG ACACTGACAG TGCAAGTGTT ACGTGTCCCA TGTGCTTTAT GGTTGAAGTT 420
GGGAAGAGTG AGAGAGCAAA GATGATTTCT TGCAAGTGTT GTCGCAAGAA GTATCATAGA 480
AACTGCTTGA AGTCTTGGGC TCAACATAGA GATTTGTTTA ACTGGAGCTC TTGGGCTTGC 540
CCCTCTTGCC GAACCTGTGA GGCCTGTGGA ACATCAGGGG ATCCAAAGAA GTTGATGTTC 600
TGCAAACGAT GTGATGATGC CTATCATTGT GATTGCCAAC AGCCTCGACA CAAGACTGTT 660
AGTTCTGGAC CCTATCTATG TCCTAAACAC ACCAAATGTT ACAGCTGTGG GTCTAAAGTC 720
CCTGGGAATG GCCAGAGCTT ACGGTGGTTT TTGGGGCATA CTTGTTGTGA TGCTTGTGGA 780
AGGCTGTTTG GCAAGGGAAA TTATTGTCCT GTATGTTTGA AGGTTTACAG GGACTCGGAA 840
GCAACACCAA TGGTGTGTTG TGACTATTGC CAGCGCTGGG TCCATTGCTT GTGTGATGGA 900
ATCAGCGATG AGAAATATAT GCAGTTTCAA GTGGATGGGA ATCTTCAGTA CAAATGTTCT 960
ACTTGTCGCG GAGAAAGCTA CCAGGTCAAG GATCTTGAGG ATGCTGTACA GGAAATTTGG 1020
AAACGTAAAG ATATCGAGGA TAAAGAGCTA ATTGCTAGCC TAAGAGCTAG TGCACGAGTC 1080
GTAGGGAAAA CTGGTGGCGC CCCTGTTATC GATCAGCCTG GTTCTGCCGA AAGAAAAGTT 1140
GCTGAAAAGG CTATGGTCAG TGGAGAAGAA GAGAAGCCAC TGAGAGTTCT CAGAATAAAA 1200
AGTAGCAGGC CTCAAGATTC AGATAGTGAG AAACTCGGAA AACACTCTAA AGAGCAGAGC 1260
CCTGTGAAGG CGAAAAAATT GGTGATAAGT ATAGGCCCTA GAAAAGCAGG AGTTACAAAC 1320
CCGATGAGTT GCGACACATC AAAGCTTGCC TCCAAATCGA ACGGAAAGCA TGGGAAATTA 1380
CAATCAGAAG AAACCGCTTC CCAAGAAGAG CAGGAAAGGA GCATATTGAG AAAGAGTAGT 1440
GAAGAAAAGA GAGGGTCTCA AAGTGAGGTA GGCACTTCAA AGGGGGAAGG CGGAGGAGAT 1500
TCAAATGGTG GCCAACAAGA GTTGCAGAAA GATTCAAGAA GATTGCTGAA ACTGAAAATA 1560
AAAACTCATA ATCCGGAGAG CCAAGAACGT GAAGCCCCTA GAATCGTGTA TGAAAGAAGC 1620
AAGTCTGGGA AAGGACATAG GTCCAAAAGA AAGAGAGCAT CACCTCCAGC TGAAAAATCA 1680
GCGTTCAATG AAGATGAAGA TGTGTCACTG TCTCGTGATG ACAGTTTGTT AGACGAAATG 1740
CTTGATGCTA GTTGGATTCT GAAGAAGTTG GGGAAGGATG CAAAAGGCAA AAAGGTTCAA 1800
ATACACGAGG CCGCAGATAA TACATGGGAG AAAGGGGTGG TAAGTGAAGT AGGAGGAGGA 1860
GGGACGTCGA AGTTGATGGT GACGCTTGAG AATGGAAAAG TGAAGACGGT GGAGCTTGGA 1920
AAGCAAGGGG TTAGATTTGT TGCTCAGAAG CAGAAGAGGA CGAGAACGTG A 1972
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0153 Bo8g080980.1 Brassica oleracea 96 0.0 1092
WERAM-Arl-0025 fgenesh1_pg.C_scaffold_5001699 Arabidopsis lyrata 77 0.0 907
WERAM-Art-0087 AT3G52100.1 Arabidopsis thaliana 75 0.0 898
WERAM-Thc-0017 EOX96661 Theobroma cacao 63 6e-133 472
WERAM-Sol-0013 Solyc01g087430.2.1 Solanum lycopersicum 59 1e-131 467
WERAM-Viv-0082 VIT_13s0064g00630.t01 Vitis vinifera 60 4e-130 462
WERAM-Mua-0133 GSMUA_Achr8P31480_001 Musa acuminata 55 8e-130 461
WERAM-Met-0094 KEH29501 Medicago truncatula 61 1e-127 454
WERAM-Pot-0105 POPTR_0009s06460.1 Populus trichocarpa 58 3e-127 453
WERAM-Amt-0090 ERN00866 Amborella trichopoda 54 1e-125 447
WERAM-Prp-0032 EMJ21805 Prunus persica 57 5e-125 446
WERAM-Zem-0124 GRMZM2G365888_P01 Zea mays 51 2e-119 427
WERAM-Glm-0137 GLYMA12G01040.1 Glycine max 57 6e-116 416
WERAM-Tra-0246 Traes_5DS_E82950B9C.1 Triticum aestivum 55 2e-115 414
WERAM-Hov-0071 MLOC_58575.1 Hordeum vulgare 49 5e-113 405
WERAM-Orr-0123 ORUFI12G15660.1 Oryza rufipogon 49 1e-111 400
WERAM-Lep-0118 LPERR12G11680.1 Leersia perrieri 46 6e-110 395
WERAM-Orbr-0125 OB12G21490.1 Oryza brachyantha 61 2e-104 377
WERAM-Orni-0122 ONIVA12G14190.1 Oryza nivara 60 5e-104 376
WERAM-Orl-0077 KN539619.1_FGP013 Oryza longistaminata 60 5e-104 376
WERAM-Orgl-0120 OGLUM12G15650.1 Oryza glumaepatula 60 5e-104 376
WERAM-Ors-0110 OS12T0527800-01 Oryza sativa 60 2e-103 374
WERAM-Orp-0113 OPUNC12G12830.1 Oryza punctata 59 5e-103 372
WERAM-Org-0115 ORGLA12G0122900.1 Oryza glaberrima 60 5e-103 372
WERAM-Php-0038 PP1S184_45V6.1 Physcomitrella patens 48 3e-102 370
WERAM-Brd-0094 BRADI4G06137.1 Brachypodium distachyon 56 1e-100 365
WERAM-Sei-0081 Si021380m Setaria italica 68 2e-100 363
WERAM-Ori-0124 BGIOSGA036080-PA Oryza indica 55 3e-98 356
WERAM-Sem-0114 EFJ10374 Selaginella moellendorffii 55 1e-82 304
WERAM-Orb-0123 OBART12G14210.1 Oryza barthii 59 1e-78 291
WERAM-Orm-0107 OMERI12G10030.1 Oryza meridionalis 46 1e-38 159
WERAM-Ocp-0011 ENSOPRP00000001256.2 Ochotona princeps 34 1e-25 115
WERAM-Dan-0042 ENSDNOP00000004307.3 Dasypus novemcinctus 33 4e-25 114
WERAM-Bot-0034 ENSBTAP00000003584.5 Bos taurus 33 6e-25 113
WERAM-Ova-0040 ENSOARP00000005352.1 Ovis aries 33 7e-25 113
WERAM-Ran-0238 ENSRNOP00000071806.1 Rattus norvegicus 33 8e-25 113
WERAM-Mim-0097 ENSMICP00000009069.1 Microcebus murinus 33 1e-24 112
WERAM-Ptv-0144 ENSPVAP00000012104.1 Pteropus vampyrus 32 1e-24 112
WERAM-Mum-0016 ENSMUSP00000006470.7 Mus musculus 33 1e-24 112
WERAM-Myl-0129 ENSMLUP00000010443.2 Myotis lucifugus 32 1e-24 112
WERAM-Mup-0069 ENSMPUP00000006153.1 Mustela putorius furo 32 1e-24 112
WERAM-Ere-0115 ENSEEUP00000012211.1 Erinaceus europaeus 32 1e-24 112
WERAM-Sus-0021 ENSSSCP00000003118.2 Sus scrofa 32 1e-24 112
WERAM-Ict-0194 ENSSTOP00000017577.1 Ictidomys tridecemlineatus 33 2e-24 112
WERAM-Xet-0112 ENSXETP00000038145.3 Xenopus tropicalis 34 2e-24 112
WERAM-Caj-0107 ENSCJAP00000018740.2 Callithrix jacchus 32 2e-24 111
WERAM-Eqc-0036 ENSECAP00000005758.1 Equus caballus 33 2e-24 111
WERAM-Tut-0028 ENSTTRP00000002118.1 Tursiops truncatus 32 2e-24 111
WERAM-Loa-0170 ENSLAFP00000015714.4 Loxodonta africana 32 2e-24 111
WERAM-Hos-0263 ENSP00000398837.1 Homo sapiens 33 3e-24 111
WERAM-Chs-0048 ENSCSAP00000000728.1 Chlorocebus sabaeus 33 3e-24 111
WERAM-Paa-0047 ENSPANP00000008627.1 Papio anubis 33 3e-24 111
WERAM-Otg-0054 ENSOGAP00000003714.2 Otolemur garnettii 33 3e-24 110
WERAM-Pat-0090 ENSPTRP00000018591.5 Pan troglodytes 33 3e-24 110
WERAM-Tub-0051 ENSTBEP00000006325.1 Tupaia belangeri 33 3e-24 110
WERAM-Nol-0118 ENSNLEP00000013752.1 Nomascus leucogenys 33 3e-24 110
WERAM-Caf-0080 ENSCAFP00000010253.3 Canis familiaris 32 3e-24 110
WERAM-Aim-0005 ENSAMEP00000000356.1 Ailuropoda melanoleuca 32 4e-24 110
WERAM-Orc-0128 ENSOCUP00000011001.2 Oryctolagus cuniculus 33 4e-24 110
WERAM-Gog-0190 ENSGGOP00000016403.2 Gorilla gorilla 33 4e-24 110
WERAM-Fec-0070 ENSFCAP00000005933.3 Felis catus 32 4e-24 110
WERAM-Mam-0017 ENSMMUP00000003194.2 Macaca mulatta 33 5e-24 110
WERAM-Dio-0085 ENSDORP00000008518.1 Dipodomys ordii 33 6e-24 110
WERAM-Gam-0119 ENSGMOP00000012588.1 Gadus morhua 33 6e-24 110
WERAM-Leo-0025 ENSLOCP00000004893.1 Lepisosteus oculatus 34 2e-23 108
WERAM-Dar-0010 ENSDARP00000095298.3 Danio rerio 31 4e-23 107
WERAM-Xim-0188 ENSXMAP00000015069.1 Xiphophorus maculatus 32 4e-23 107
WERAM-Ect-0072 ENSETEP00000007880.1 Echinops telfairi 33 6e-23 107
WERAM-Ten-0216 ENSTNIP00000021642.1 Tetraodon nigroviridis 32 6e-23 106
WERAM-Orla-0062 ENSORLP00000008124.1 Oryzias latipes 32 7e-23 106
WERAM-Mod-0122 ENSMODP00000017499.3 Monodelphis domestica 32 7e-23 106
WERAM-Gaga-0065 ENSGALP00000010110.4 Gallus gallus 29 7e-23 106
WERAM-Tar-0169 ENSTRUP00000035798.1 Takifugu rubripes 31 8e-23 106
WERAM-Mae-0133 ENSMEUP00000013331.1 Macropus eugenii 32 1e-22 105
WERAM-Anp-0025 ENSAPLP00000003226.1 Anas platyrhynchos 29 1e-22 105
WERAM-Meg-0048 ENSMGAP00000004625.2 Meleagris gallopavo 28 1e-22 105
WERAM-Orn-0232 ENSONIP00000024873.1 Oreochromis niloticus 31 1e-22 105
WERAM-Pof-0093 ENSPFOP00000008184.2 Poecilia formosa 32 2e-22 105
WERAM-Tag-0008 ENSTGUP00000000641.1 Taeniopygia guttata 28 2e-22 105
WERAM-Cap-0070 ENSCPOP00000005242.2 Cavia porcellus 33 2e-22 105
WERAM-Pes-0058 ENSPSIP00000007945.1 Pelodiscus sinensis 33 2e-22 105
WERAM-Gaa-0036 ENSGACP00000005612.1 Gasterosteus aculeatus 31 2e-22 104
WERAM-Sah-0138 ENSSHAP00000014807.1 Sarcophilus harrisii 33 3e-22 104
WERAM-Fia-0123 ENSFALP00000010386.1 Ficedula albicollis 32 3e-22 104
WERAM-Poa-0036 ENSPPYP00000004505.2 Pongo abelii 33 3e-22 104
WERAM-Ora-0065 ENSOANP00000009850.3 Ornithorhynchus anatinus 29 4e-22 104
WERAM-Prc-0053 ENSPCAP00000005189.1 Procavia capensis 33 4e-22 103
WERAM-Anc-0174 ENSACAP00000016400.2 Anolis carolinensis 33 5e-22 103
WERAM-Vip-0054 ENSVPAP00000005197.1 Vicugna pacos 33 9e-22 102
WERAM-Lac-0079 ENSLACP00000010253.1 Latimeria chalumnae 30 2e-21 102
WERAM-Cae-0045 T12D8.1 Caenorhabditis elegans 30 3e-21 100
WERAM-Drm-0094 FBpp0072043 Drosophila melanogaster 32 6e-21 100
WERAM-Asm-0037 ENSAMXP00000004791.1 Astyanax mexicanus 31 8e-21 99.8
WERAM-Pem-0018 ENSPMAP00000002590.1 Petromyzon marinus 32 1e-20 99.0
WERAM-Cis-0045 ENSCSAVP00000009955.1 Ciona savignyi 30 5e-20 97.1
WERAM-Tas-0126 ENSTSYP00000013377.1 Tarsius syrichta 28 4e-19 94.4
WERAM-Soa-0040 ENSSARP00000003919.1 Sorex araneus 29 8e-19 93.2
Created Date 25-Jun-2016