WERAM Information

Tag Content
WERAM ID WERAM-Bro-0153
Ensembl Protein ID Bo8g080980.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo8g080980 Bo8g080980.1 Bo8g080980.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.00e-13 51.8 132 324
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   3 iClvCgkddegeke...mvqCdeCddwfHlkCvklplsslpeg....kswyCpsCke 52 
                   +C++C  ++ g++e   m+ C+ C + +H +C+k      + +    +sw CpsC++
  Bo8g080980.1 132 TCPMCFLVEVGKSErakMISCKCCGKKYHRNCLKSW--AQHRDlfnwSSWACPSCRT 186
                   7****766666555567*****************99..33333456789******96 PP
       PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                   +C +Cg++++ +k ++ C+ Cdd++H +C ++  +++++g  ++Cp++++
  Bo8g080980.1 186 TCEACGTSGDPKK-LMFCKRCDDAYHCDCQQPRHKTVSSG-PYLCPKHTK 233
                   7****88888877.9******************9999999.******986 PP
       PHD.txt   4 ClvCgkddegeke.......mvqCdeCdd 25 
                   C+ Cg +  g+ +         +Cd C +
  Bo8g080980.1 234 CYSCGSKVPGNGQslrwflgYTCCDACGR 262
                   99997555554444677777778**9976 PP
       PHD.txt   2 tiClvCgkddegeke..mvqCdeCddwfHlkCvklplsslpeg.....kswyCpsCk 51 
                   ++C+vC k++ +++   mv+Cd C++w+H  C +++ ++  +       ++ C +C+
  Bo8g080980.1 268 NYCPVCLKVYRDSEAtpMVCCDYCQRWVHCLCDGISDEKYMQFqvdgnLQYKCSTCR 324
                   79****98888866677*******************33333325667788******8 PP
Protein Sequence
(Fasta)		MAFHVACPIT CRKICDCLFG FPRSLHGKEA KDLFLDEIHS LQHLLPDPWD AGASKEGTVQ 60
IHVPKLAPSD AGVDDSVKEV VAASSVSRLG RHTVVLKKAV ENHAEHSASD DFEMAVNELN 120
EVDHDTDSAS VTCPMCFLVE VGKSERAKMI SCKCCGKKYH RNCLKSWAQH RDLFNWSSWA 180
CPSCRTCEAC GTSGDPKKLM FCKRCDDAYH CDCQQPRHKT VSSGPYLCPK HTKCYSCGSK 240
VPGNGQSLRW FLGYTCCDAC GRLFGKGNYC PVCLKVYRDS EATPMVCCDY CQRWVHCLCD 300
GISDEKYMQF QVDGNLQYKC STCRGESYQV KDLEDAVQEI WKRKDIEDKE LIASLRARAR 360
VVGKTGGAPV INQPGSAERK VAEKVMVSGE EEKPLRVLRI KSSRPQDSDS EELGKHSKEQ 420
SRVKAKKLVI SIGPRKAGVT NPTSSCDTSK LASKSNGKNG KLQSEETASQ EEQERSVLRK 480
SSEEKRGSQS EVGTSKGEGG GDSNGGQQEL QKDSKRLLKL KIKTHNPESQ EREAPRIVYE 540
RSKSGKGHRS KRKRASPPPE KSAFNEDEDV SLSRDDSLLD EMLDASWILK KLGKDAKGKK 600
VQIHEASDNT WEKGVVSEVG GGGTSKLMVT LENGKVKTVE LGKQGVRFVA QKQKRTRT 658
Nucleotide Sequence
(Fasta)		ATGGCCTTTC ACGTAGCTTG TCCAATTACA TGCCGTAAAA TTTGCGACTG CTTGTTTGGG 60
TTTCCTCGGA GTCTCCATGG AAAGGAAGCC AAGGATTTGT TCCTCGACGA GATTCATTCT 120
CTTCAGCACT TGTTGCCTGA CCCCTGGGAT GCTGGAGCCT CAAAGGAAGG CACCGTTCAG 180
ATCCACGTGC CTAAGCTCGC TCCCTCCGAT GCTGGTGTGG ATGATTCGGT AAAGGAGGTG 240
GTTGCTGCCT CGTCGGTTTC GAGGCTAGGC AGACACACGG TGGTGCTGAA GAAGGCAGTT 300
GAGAATCATG CTGAACATTC TGCTTCTGAT GACTTTGAGA TGGCGGTCAA TGAGCTCAAT 360
GAAGTAGATC ATGACACTGA CAGTGCAAGT GTTACGTGTC CCATGTGCTT TTTGGTTGAA 420
GTTGGGAAGA GTGAGAGAGC AAAGATGATT TCTTGCAAGT GTTGTGGCAA GAAGTATCAC 480
AGAAACTGCT TGAAGTCTTG GGCTCAACAT AGAGATCTGT TTAACTGGAG CTCCTGGGCT 540
TGCCCCTCTT GCCGAACCTG TGAGGCATGT GGAACTTCAG GGGATCCGAA GAAGTTGATG 600
TTCTGCAAAA GATGTGATGA TGCCTATCAT TGTGATTGCC AACAGCCTCG ACACAAGACT 660
GTTAGTTCTG GACCCTATCT GTGTCCTAAA CACACCAAAT GTTACAGCTG TGGGTCTAAA 720
GTCCCTGGGA ATGGCCAGAG CTTACGGTGG TTTTTGGGGT ATACTTGTTG TGATGCTTGT 780
GGAAGGCTGT TTGGCAAGGG AAATTATTGT CCTGTATGTT TGAAGGTTTA CAGGGACTCG 840
GAAGCAACAC CAATGGTGTG TTGTGACTAT TGCCAGCGCT GGGTCCATTG CTTGTGTGAT 900
GGAATCAGCG ATGAGAAATA TATGCAGTTT CAAGTGGATG GGAATCTTCA GTACAAATGT 960
TCTACTTGTC GCGGAGAAAG CTACCAGGTC AAGGATCTTG AGGATGCTGT ACAGGAAATT 1020
TGGAAACGTA AAGATATCGA GGATAAAGAG CTAATTGCTA GCCTAAGAGC TAGAGCACGA 1080
GTCGTAGGGA AAACTGGTGG CGCCCCTGTT ATCAATCAGC CTGGTTCTGC CGAAAGAAAA 1140
GTTGCTGAAA AGGTTATGGT CAGTGGAGAA GAAGAGAAGC CACTGAGAGT TCTCAGGATA 1200
AAAAGTAGCA GGCCTCAAGA TTCAGATAGC GAGGAACTCG GAAAACACTC TAAAGAGCAG 1260
AGCCGTGTGA AGGCGAAAAA ATTGGTGATA AGTATAGGCC CTAGAAAAGC AGGAGTTACA 1320
AACCCGACGA GCAGCTGCGA TACATCAAAG CTTGCCTCCA AATCCAACGG AAAGAATGGG 1380
AAATTGCAAT CAGAAGAAAC CGCTTCCCAA GAAGAGCAGG AAAGGAGCGT ATTGAGAAAG 1440
AGTAGTGAAG AAAAGAGAGG GTCTCAAAGT GAGGTAGGCA CTTCAAAGGG GGAAGGCGGA 1500
GGAGATTCAA ATGGTGGCCA ACAAGAGTTG CAGAAAGATT CAAAAAGATT GCTGAAACTG 1560
AAAATAAAAA CGCATAATCC GGAGAGCCAA GAACGTGAAG CCCCTAGAAT TGTGTATGAA 1620
AGAAGCAAGT CTGGGAAAGG ACATAGGTCC AAAAGAAAGA GAGCATCACC TCCACCTGAA 1680
AAATCAGCGT TCAATGAAGA TGAAGATGTG TCACTGTCAC GTGATGACAG TTTGTTAGAC 1740
GAAATGCTTG ATGCTAGTTG GATTCTGAAG AAGTTGGGGA AGGATGCAAA AGGCAAAAAG 1800
GTTCAAATAC ACGAGGCCTC AGATAATACA TGGGAGAAAG GAGTGGTAAG TGAAGTAGGA 1860
GGAGGAGGGA CATCGAAGTT GATGGTGACG CTTGAGAATG GAAAAGTGAA GACGGTGGAG 1920
CTGGGGAAGC AAGGGGTTAG ATTTGTTGCT CAAAAGCAAA AGAGGACGAG AACGTGA 1978
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0034 Bra006897.1-P Brassica rapa 96 0.0 1062
WERAM-Arl-0025 fgenesh1_pg.C_scaffold_5001699 Arabidopsis lyrata 77 0.0 884
WERAM-Art-0087 AT3G52100.1 Arabidopsis thaliana 74 0.0 874
WERAM-Thc-0017 EOX96661 Theobroma cacao 63 8e-131 464
WERAM-Sol-0013 Solyc01g087430.2.1 Solanum lycopersicum 60 1e-129 461
WERAM-Viv-0082 VIT_13s0064g00630.t01 Vitis vinifera 60 3e-129 459
WERAM-Mua-0133 GSMUA_Achr8P31480_001 Musa acuminata 52 8e-129 458
WERAM-Pot-0104 POPTR_0009s06440.1 Populus trichocarpa 60 6e-125 445
WERAM-Prp-0032 EMJ21805 Prunus persica 58 9e-124 441
WERAM-Met-0094 KEH29501 Medicago truncatula 59 2e-123 440
WERAM-Amt-0090 ERN00866 Amborella trichopoda 53 2e-121 434
WERAM-Zem-0124 GRMZM2G365888_P01 Zea mays 51 4e-118 422
WERAM-Glm-0137 GLYMA12G01040.1 Glycine max 57 2e-115 413
WERAM-Tra-0246 Traes_5DS_E82950B9C.1 Triticum aestivum 50 1e-112 404
WERAM-Orr-0123 ORUFI12G15660.1 Oryza rufipogon 48 5e-111 399
WERAM-Hov-0071 MLOC_58575.1 Hordeum vulgare 50 2e-110 397
WERAM-Lep-0118 LPERR12G11680.1 Leersia perrieri 47 5e-108 389
WERAM-Orbr-0125 OB12G21490.1 Oryza brachyantha 56 2e-105 380
WERAM-Orgl-0120 OGLUM12G15650.1 Oryza glumaepatula 61 7e-105 379
WERAM-Orl-0077 KN539619.1_FGP013 Oryza longistaminata 61 8e-105 378
WERAM-Orni-0122 ONIVA12G14190.1 Oryza nivara 61 9e-105 378
WERAM-Ors-0110 OS12T0527800-01 Oryza sativa 61 3e-104 377
WERAM-Org-0115 ORGLA12G0122900.1 Oryza glaberrima 61 9e-104 375
WERAM-Orp-0113 OPUNC12G12830.1 Oryza punctata 65 4e-103 373
WERAM-Brd-0094 BRADI4G06137.1 Brachypodium distachyon 56 3e-101 366
WERAM-Sei-0081 Si021380m Setaria italica 60 4e-101 366
WERAM-Ori-0124 BGIOSGA036080-PA Oryza indica 55 8e-99 358
WERAM-Php-0038 PP1S184_45V6.1 Physcomitrella patens 47 6e-97 352
WERAM-Sem-0114 EFJ10374 Selaginella moellendorffii 48 4e-83 306
WERAM-Orb-0123 OBART12G14210.1 Oryza barthii 60 1e-79 295
WERAM-Orm-0107 OMERI12G10030.1 Oryza meridionalis 39 5e-39 160
WERAM-Ocp-0011 ENSOPRP00000001256.2 Ochotona princeps 34 2e-26 118
WERAM-Dan-0042 ENSDNOP00000004307.3 Dasypus novemcinctus 34 1e-25 115
WERAM-Ova-0040 ENSOARP00000005352.1 Ovis aries 34 1e-25 115
WERAM-Bot-0034 ENSBTAP00000003584.5 Bos taurus 34 2e-25 115
WERAM-Ran-0238 ENSRNOP00000071806.1 Rattus norvegicus 34 2e-25 115
WERAM-Mim-0097 ENSMICP00000009069.1 Microcebus murinus 34 2e-25 114
WERAM-Ptv-0144 ENSPVAP00000012104.1 Pteropus vampyrus 33 3e-25 114
WERAM-Myl-0129 ENSMLUP00000010443.2 Myotis lucifugus 33 3e-25 114
WERAM-Sus-0021 ENSSSCP00000003118.2 Sus scrofa 33 3e-25 114
WERAM-Mum-0016 ENSMUSP00000006470.7 Mus musculus 34 3e-25 114
WERAM-Mup-0069 ENSMPUP00000006153.1 Mustela putorius furo 33 3e-25 114
WERAM-Ere-0115 ENSEEUP00000012211.1 Erinaceus europaeus 33 3e-25 114
WERAM-Ict-0194 ENSSTOP00000017577.1 Ictidomys tridecemlineatus 34 4e-25 114
WERAM-Tut-0028 ENSTTRP00000002118.1 Tursiops truncatus 33 4e-25 114
WERAM-Eqc-0036 ENSECAP00000005758.1 Equus caballus 34 5e-25 113
WERAM-Caj-0107 ENSCJAP00000018740.2 Callithrix jacchus 33 6e-25 113
WERAM-Loa-0170 ENSLAFP00000015714.4 Loxodonta africana 33 6e-25 113
WERAM-Hos-0263 ENSP00000398837.1 Homo sapiens 34 6e-25 113
WERAM-Pat-0090 ENSPTRP00000018591.5 Pan troglodytes 34 7e-25 113
WERAM-Chs-0048 ENSCSAP00000000728.1 Chlorocebus sabaeus 34 7e-25 113
WERAM-Tub-0051 ENSTBEP00000006325.1 Tupaia belangeri 33 7e-25 113
WERAM-Nol-0118 ENSNLEP00000013752.1 Nomascus leucogenys 34 7e-25 113
WERAM-Paa-0047 ENSPANP00000008627.1 Papio anubis 34 8e-25 113
WERAM-Aim-0005 ENSAMEP00000000356.1 Ailuropoda melanoleuca 32 8e-25 113
WERAM-Otg-0054 ENSOGAP00000003714.2 Otolemur garnettii 33 8e-25 112
WERAM-Orc-0128 ENSOCUP00000011001.2 Oryctolagus cuniculus 33 8e-25 112
WERAM-Gog-0190 ENSGGOP00000016403.2 Gorilla gorilla 34 9e-25 112
WERAM-Caf-0080 ENSCAFP00000010253.3 Canis familiaris 32 9e-25 112
WERAM-Fec-0070 ENSFCAP00000005933.3 Felis catus 32 9e-25 112
WERAM-Gam-0119 ENSGMOP00000012588.1 Gadus morhua 34 9e-25 112
WERAM-Xet-0067 ENSXETP00000022279.3 Xenopus tropicalis 30 1e-24 112
WERAM-Mam-0017 ENSMMUP00000003194.2 Macaca mulatta 34 1e-24 112
WERAM-Dio-0085 ENSDORP00000008518.1 Dipodomys ordii 33 1e-24 112
WERAM-Leo-0025 ENSLOCP00000004893.1 Lepisosteus oculatus 35 3e-24 110
WERAM-Gaga-0065 ENSGALP00000010110.4 Gallus gallus 30 4e-24 110
WERAM-Tar-0215 ENSTRUP00000044838.1 Takifugu rubripes 35 5e-24 110
WERAM-Dar-0010 ENSDARP00000095298.3 Danio rerio 31 6e-24 110
WERAM-Meg-0048 ENSMGAP00000004625.2 Meleagris gallopavo 30 7e-24 109
WERAM-Anp-0025 ENSAPLP00000003226.1 Anas platyrhynchos 30 7e-24 109
WERAM-Tag-0008 ENSTGUP00000000641.1 Taeniopygia guttata 30 1e-23 109
WERAM-Ect-0072 ENSETEP00000007880.1 Echinops telfairi 34 1e-23 108
WERAM-Ora-0065 ENSOANP00000009850.3 Ornithorhynchus anatinus 30 2e-23 108
WERAM-Xim-0055 ENSXMAP00000005029.1 Xiphophorus maculatus 34 2e-23 108
WERAM-Cap-0070 ENSCPOP00000005242.2 Cavia porcellus 34 3e-23 107
WERAM-Ten-0167 ENSTNIP00000016534.1 Tetraodon nigroviridis 32 3e-23 107
WERAM-Pes-0058 ENSPSIP00000007945.1 Pelodiscus sinensis 33 4e-23 107
WERAM-Sah-0138 ENSSHAP00000014807.1 Sarcophilus harrisii 33 4e-23 107
WERAM-Mod-0116 ENSMODP00000016853.4 Monodelphis domestica 33 5e-23 107
WERAM-Fia-0123 ENSFALP00000010386.1 Ficedula albicollis 32 5e-23 107
WERAM-Orla-0062 ENSORLP00000008124.1 Oryzias latipes 33 5e-23 107
WERAM-Poa-0036 ENSPPYP00000004505.2 Pongo abelii 33 6e-23 107
WERAM-Prc-0053 ENSPCAP00000005189.1 Procavia capensis 33 7e-23 106
WERAM-Mae-0133 ENSMEUP00000013331.1 Macropus eugenii 32 1e-22 105
WERAM-Lac-0079 ENSLACP00000010253.1 Latimeria chalumnae 30 1e-22 105
WERAM-Orn-0232 ENSONIP00000024873.1 Oreochromis niloticus 34 1e-22 105
WERAM-Anc-0174 ENSACAP00000016400.2 Anolis carolinensis 34 1e-22 105
WERAM-Drm-0094 FBpp0072043 Drosophila melanogaster 33 1e-22 105
WERAM-Gaa-0036 ENSGACP00000005612.1 Gasterosteus aculeatus 31 2e-22 105
WERAM-Vip-0054 ENSVPAP00000005197.1 Vicugna pacos 33 3e-22 104
WERAM-Pof-0093 ENSPFOP00000008184.2 Poecilia formosa 32 5e-22 103
WERAM-Cae-0045 T12D8.1 Caenorhabditis elegans 30 3e-21 100
WERAM-Pem-0018 ENSPMAP00000002590.1 Petromyzon marinus 32 8e-21 99.8
WERAM-Cis-0045 ENSCSAVP00000009955.1 Ciona savignyi 30 1e-20 99.4
WERAM-Tas-0126 ENSTSYP00000013377.1 Tarsius syrichta 29 1e-20 99.0
WERAM-Asm-0037 ENSAMXP00000004791.1 Astyanax mexicanus 31 1e-20 99.0
WERAM-Soa-0040 ENSSARP00000003919.1 Sorex araneus 30 3e-20 97.8
Created Date 25-Jun-2016